BAC Information

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BAC

Clone NameB6Ng01-282C21
Chromosome10 (Build37)
Map Location 3,315,674 - 3,316,807
singlet/doubletsinglet
Overlap geneOprm1
Upstream geneCnksr3
Downstream geneA130090K04Rik, LOC237252, LOC100041224
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282C21.bB6Ng01-282C21.g
ACCGA081466GA081467
length1,2011,126
definitionB6Ng01-282C21.b B6Ng01-282C21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagcccatacttaaacataataaaagcaataatacagcaaacc
agtagccaacatcaaactaaatgaagagaagctgaaagcaatcccactaa
aatcagggactagacaaggctgcccactttctccctacctattcaatata
gtacttgaagtctagccatagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagttaaaatatcactatttgcacatgatac
gatagtatatataagtgaccctaaaaattccaccagaaaactcctaaacc
tgataaacagcttcagtgaagtagctagatataaaattaactcaaacaaa
ttaatggcctttctgtacacaaaggataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatattaaataccttggtg
tgactctaactaaggaagtgaaagatctgtatgataagaacttcaagtct
ctgaagaaagaaatcaaagaagatctcagaagatggaaagctctcccatg
ctcacttattggcaggatcaatatagtgaaaatgtctatcttgctgaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagggcaatttgcaaatttatctggaataacaaaaaacc
taggatagcaaaaactattctcaacaataaaagaacctctggtggaatca
ccatgcctgacctcaaactgtactaagagtaattgtgataaaaacaaaaa
acaaaaaacaaacaaacaaaaaaaaacttacatggtactggtacagcaac
agatagaccaatggaatagaattgaagacccagaaatgaacacaaatacc
tatggtctcttgacctttgacaagggagctaaaaccattcagtggaaaaa
aagacagcattttcaacaaatggtactggcacaactggcggtatatgtag
aagaatgtgaactgatccatttgtatctctgtactaagtcaagtctaatt
ggatcatgagatcacataaaatcagaagaacactggaaaccgtatgagga
gaaagtgggtaaaagctcagaacatggcacaggggaaaatcctgaatgaa
cgccaatggcttggtgcgtgtagaatccagaaatgtgaacaaatggggga
c

gaattctgattctcggtgagcatggtggcgcacacctttaacctcagcac
ttgggaacacagggcacatttctgaggatcataaatggggccctacagac
ataagacaagtgctacaagacctggagctacagtttagccttaatgttta
tatttgacttagttgaggaatatttcctgaggcttagtgaggcattttaa
ctagtgatatttttatgtttaacttagttttgtgttttggactttgttgg
tgtttcattgtgtggtagcaaaataaacagtcattctttcattggaagga
acagggagcaccgcccacacccagtctttaccttccttgcatcaggcaca
aaactacctgacaaaatcaatgaagaaatggttgatttggactgatggtt
ggggtctgtcatggtttggaaggcacagtgataggagcccgaggcatctg
gtcatgttgtgtccacagtcaggggcagagaaatgagtgttgagcctctt
taatgcagtctgggatctcagcctgtggcagggtgatcttcacatgcaga
gtgggtctacctgcctcagtgaagcctgtttggagacatcctcacaggta
gatggcctcggacattttctcctgggtgattctaaagcaaaccgacaggc
tcaattaaccatcatgggagaaacgccttccaccctgcaaagggtgtttg
gaaagccaaagaaatgctcacgagtcgacactggcactagatgcttaaaa
ctcttacagaaactggtgttcatgttgtagaaactgagtcaaccaatgaa
tttgataaaccattgaggcacaacatttgactttcagggaaaaaatcact
tagaaagctcacagtttttaagagagagaaaaagagcaaaaccaagcaaa
aagaagtctagactacttttgcctcactgaaaagcatgctccgcagacca
agcacagttgcggatgtggagatgcccacctctgctggttgtatggggca
gtgcagcctcctgcagcctcatctcctgctgtgctgggcagaaacgataa
gacaaacaaaaccaacaaacagggctgaagagatgctcagttgcttaaag
cactgactgcctttcagagttcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_3315674_3316807
seq2: B6Ng01-282C21.g_64_1189

seq1  GAATTCTGATTCTCGGTGAGCATGGTGGCGCACACCTTTAACCTCAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTCTCGGTGAGCATGGTGGCGCACACCTTTAACCTCAGCAC  50

seq1  TTGGGAACACAGGGCACATTTCTGAGGATCATAAATGGGGCCCTACAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAACACAGGGCACATTTCTGAGGATCATAAATGGGGCCCTACAGAC  100

seq1  ATAAGACAAGTGCTACAAGACCTGGAGCTACAGTTTAGCCTTAATGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAAGTGCTACAAGACCTGGAGCTACAGTTTAGCCTTAATGTTTA  150

seq1  TATTTGACTTAGTTGAGGAATATTTCCTGAGGCTTAGTGAGGCATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGACTTAGTTGAGGAATATTTCCTGAGGCTTAGTGAGGCATTTTAA  200

seq1  CTAGTGATATTTTTATGTTTAACTTAGTTTTGTGTTTTGGACTTTGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGATATTTTTATGTTTAACTTAGTTTTGTGTTTTGGACTTTGTTGG  250

seq1  TGTTTCATTGTGTGGTAGCAAAATAAACAGTCATTCTTTCATTGGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCATTGTGTGGTAGCAAAATAAACAGTCATTCTTTCATTGGAAGGA  300

seq1  ACAGGGAGCACCGCCCACACCCAGTCTTTACCTTCCTTGCATCAGGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGAGCACCGCCCACACCCAGTCTTTACCTTCCTTGCATCAGGCACA  350

seq1  AAACTACCTGACAAAATCAATGAAGAAATGGTTGATTTGGACTGATGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACCTGACAAAATCAATGAAGAAATGGTTGATTTGGACTGATGGTT  400

seq1  GGGGTCTGTCATGGTTTGGAAGGCACAGTGATAGGAGCCCGAGGCATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTGTCATGGTTTGGAAGGCACAGTGATAGGAGCCCGAGGCATCTG  450

seq1  GTCATGTTGTGTCCACAGTCAGGGGCAGAGAAATGAGTGTTGAGCCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTTGTGTCCACAGTCAGGGGCAGAGAAATGAGTGTTGAGCCTCTT  500

seq1  TAATGCAGTCTGGGATCTCAGCCTGTGGCAGGGTGATCTTCACATGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCAGTCTGGGATCTCAGCCTGTGGCAGGGTGATCTTCACATGCAGA  550

seq1  GTGGGTCTACCTGCCTCAGTGAAGCCTGTTTGGAGACATCCTCACAGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTCTACCTGCCTCAGTGAAGCCTGTTTGGAGACATCCTCACAGGTA  600

seq1  GATGGCCTCGGACATTTTCTCCTGGGTGATTCTAAAGCAAACCGACAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCTCGGACATTTTCTCCTGGGTGATTCTAAAGCAAACCGACAGGC  650

seq1  TCAATTAACCATCATGGGAGAAACGCCTTCCACCCTGCAAAGGGTGTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAACCATCATGGGAGAAACGCCTTCCACCCTGCAAAGGGTGTTTG  700

seq1  GAAAGCCAAAGAAATGCTCACGAGTCGACACTGGCACTAGATGCTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCAAAGAAATGCTCACGAGTCGACACTGGCACTAGATGCTTAAAA  750

seq1  CTCTTACAGAAACTGGTGTTCATGTTGTAGAAACTGAGTCAACCAATGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAGAAACTGGTGTTCATGTTGTAGAAACTGAGTCAACCAATGAA  800

seq1  TTTGATAAACCATTGAGGCACAACATTTGACTTTCAGGGAAAAAAATCAC  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTGATAAACCATTGAGGCACAACATTTGACTTTCAGGG-AAAAAATCAC  849

seq1  TTAGAAAGCTCACAGTTTTTAAGAGAGAGAAAAAGAGCAAAA-CAAGCAA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTAGAAAGCTCACAGTTTTTAAGAGAGAGAAAAAGAGCAAAACCAAGCAA  899

seq1  AAAGAAG-CCAGACTAC-TTTGCCTCACTG-AAAGCATGCTCCGCAGACC  946
      ||||||| | ||||||| |||||||||||| |||||||||||||||||||
seq2  AAAGAAGTCTAGACTACTTTTGCCTCACTGAAAAGCATGCTCCGCAGACC  949

seq1  AAGGCACAGTTGCGGATGTGGAGATGCCCACCTCTTGCTGGTTGTATTGG  996
      || ||||||||||||||||||||||||||||||| |||||||||||| ||
seq2  AA-GCACAGTTGCGGATGTGGAGATGCCCACCTC-TGCTGGTTGTATGGG  997

seq1  GCAGTGCAGCCTCCTGCAGCCTCATCTCCTGCTGTGCTGGGGCAGGAAAC  1046
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  GCAGTGCAGCCTCCTGCAGCCTCATCTCCTGCTGTGCT-GGGCA-GAAAC  1045

seq1  GGATTAAGACAAAACAAAACCAAACAAACAGGGGCTGGAGAGATGGCTCA  1096
      |   |||||| |||||||||| |||||||| |||||| |||||| |||||
seq2  G--ATAAGAC-AAACAAAACC-AACAAACA-GGGCTGAAGAGAT-GCTCA  1089

seq1  GTGGCTAAAAGCACTGACTGCCCTTTCAGAGGTCCTGG  1134
      || ||| ||||||||||||| |||||||||| ||||||
seq2  GTTGCTTAAAGCACTGACTG-CCTTTCAGAGTTCCTGG  1126


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