BAC Information

Click to search

BAC

Clone NameB6Ng01-282D01
Chromosome10 (Build37)
Map Location 104,523,711 - 104,665,192
singlet/doubletdoublet
Overlap geneTmtc2
Upstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
Downstream geneEG627573, BC067068, Ccdc59, EG667758, EG639162
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282D01.bB6Ng01-282D01.g
ACCGA081472GA081473
length1,1581,108
definitionB6Ng01-282D01.b B6Ng01-282D01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,664,030 - 104,665,192)(104,523,711 - 104,524,699)
sequence
gaattccaccgagtcagaattgacactgcatgctttcactcagatgaaaa
gaattaagccgccttacatcttcacgctatgtataactggttcctccttt
ataaacacctccatcatattgagcagcttcagtttcactgtatgataatt
acttaagtgctcagtactttgagcaagaagatagcaaccaacctaattct
tcgaaaacttgctctgaattttcatctcaggtttcaagggaaacgtcgtc
ctccaatgctgatcacttaagatgtgctaaaaaatgtgacagtcgataaa
agttccaaagctctgccagacaagcatatgtgactgatggcttcagcaca
agccagggtcaagagtgtaagccaaataaatgccaagcattataacacac
tccatcactgaagtttgaccatcaaagagcaattcatcacttcaagctgt
caaaacctattttggttttctcttccccgttcagtggggcctggccaggg
atcaaatgcatcagagctatttagaactaaatattttgacacagtagtag
tacataaagtgatgtgaaccttgacatctatacagattagcttttagata
cttctaggaataggcatccttcactctggatatattatatgtcaaaaact
cagtcttgatttttttcatatgcacaagtgaaatctagtttgtgaaatat
tgaaaactctattgtgttgtttatatatggtttcatcatgaaagctgtcc
aactccagcatgaatctcatgtgacttttttttcctatacagcatatact
attgtctttccagagactattatctatttacatctattatatatctatta
gactataaatagtgtcaatcccaccagtagacaataagaccactaccacc
atttaaactcaaattggaagcaagctttaattaaatagagaccaggagat
agactctggccaggttcacccctgagtaccaaggaaaatggtcatgggat
cacacctttagagctttaaaagacaacccccaccaggagaccatatttct
actgggttccagtcaggagcaggcatatatctgtgtacttctgctttgca
tactctgcatcatcaagccataacatctgacatcttctggccaatgtacc
tcctaccc
gaattcattgactctcttcatccacctgagatgagaaagtaccattctaa
acagcaggaaattcatcatcaccacacaccaaatctattaatcagatttc
ctaggttcgaccactataagaaaagatagctttataactatatgagagga
attcccactgtttttcatcccagtttatgggactgcagtaggaacctgaa
cagacttaaccctgaggaatgcagatccacccttgccagcctgaatatgt
tgaaattcagaacagattcagacatataagaaaggtgagttttcccttct
cagccctctccttctcaccctcctcgtctacactaatcacacgtggagct
aggaaatccagaagctgcccttaatcatcagaacttctagcgtttggctt
tctgactccaggactaagaaaagtagacccctctcctcttccctcaattc
tcaggccttgggaataaatcacttcattgtctttcctgttttcctatttg
cagttaatagattgtggggcctttcagcttccatacttagcaagtcaatg
tccataatttatctcttttttttatatacctatatactctcattaattct
gtctttctgagacccatgattaatataatcaggtaccagtttattcaaag
caaagcaaattttaatactcgaacagaagtgaatttaattttaatatact
aaaagtaagcataaccaattgtgatttcaagaacaaacatgcacaccagt
acaaaaatcaccaccatctacaacagaccttattataatgtaatcaatga
aagtcaataagagattcagtaaaatatatttttgctttgccaactttttc
cttaaaattacagagagtatttaagtttgaggacaatatgcagtctcgtg
atttctaaatcgtaggggtgaaagcatcagaaaagacaggtaaacatctg
tgtatagctatgttctaattttttaaatatgaaacagtagcttatatttg
atctctgtaagtagtgtgggcgtccctaccttagagacacagggggtggg
ataacccgagttatgggggatcagagacttgtgagtctaaacatgtcatg
atcagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104664030_104665192
seq2: B6Ng01-282D01.b_48_1205 (reverse)

seq1  GGGTAGGAGGTACATGGGCAAGAAAGATGTCAAGATG-TATGCTTGGATG  49
      ||||||||||||||| ||| || |||||||| ||||| ||||  | ||| 
seq2  GGGTAGGAGGTACATTGGCCAG-AAGATGTC-AGATGTTATGGCTTGAT-  47

seq1  GATGCAGGAGGTATGC-AAGCAGGAAGTACACCAGGATATATGCTTGCTC  98
      |||||||   |||||| ||||| |||||||||   ||||||||| |||||
seq2  GATGCAG--AGTATGCAAAGCA-GAAGTACAC--AGATATATGCCTGCTC  92

seq1  CTGACTGG-ACCCAGTAGGAAATATGGTCTCCTGGT-GGGGTTGTCTTTT  146
      |||||||| |||||||| |||||||||||||||||| |||||||||||||
seq2  CTGACTGGAACCCAGTA-GAAATATGGTCTCCTGGTGGGGGTTGTCTTTT  141

seq1  AAAGCCTCTTAAAGGTGTGAT-CCATGACCATTTTCCTTGGTACTCAGGG  195
      |||| ||| |||||||||||| ||||||||||||||||||||||||||||
seq2  AAAG-CTC-TAAAGGTGTGATCCCATGACCATTTTCCTTGGTACTCAGGG  189

seq1  GTGAACCTGGCCAGAGTCTATCTCCTGGTCTCTATTTAATTAAAGCTTGC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCTGGCCAGAGTCTATCTCCTGGTCTCTATTTAATTAAAGCTTGC  239

seq1  TTCCAATTTGAGTTTAAATGGTGGTAGTGGTCTTATTGTCTACTGGTGGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTTGAGTTTAAATGGTGGTAGTGGTCTTATTGTCTACTGGTGGG  289

seq1  ATTGACACTATTTATAGTCTAATAGATATATAATAGATGTAAATAGATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACACTATTTATAGTCTAATAGATATATAATAGATGTAAATAGATAA  339

seq1  TAGTCTCTGGAAAGACAATAGTATATGCTGTATAGG-AAAAAAAGTCACA  394
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAGTCTCTGGAAAGACAATAGTATATGCTGTATAGGAAAAAAAAGTCACA  389

seq1  TGAGATTCATGCTGGAGTTGGACAGCTTTCATGATGAAACCATATATAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCATGCTGGAGTTGGACAGCTTTCATGATGAAACCATATATAAA  439

seq1  CAACACAATAGAGTTTTCAATATTTCACAAACTAGATTTCACTTGTGCAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAATAGAGTTTTCAATATTTCACAAACTAGATTTCACTTGTGCAT  489

seq1  ATGAAAAAAATCAAGACTGAGTTTTTGACATATAATATATCCAGAGTGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAAATCAAGACTGAGTTTTTGACATATAATATATCCAGAGTGAA  539

seq1  GGATGCCTATTCCTAGAAGTATCTAAAAGCTAATCTGTATAGATGTCAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCTATTCCTAGAAGTATCTAAAAGCTAATCTGTATAGATGTCAAG  589

seq1  GTTCACATCACTTTATGTACTACTACTGTGTCAAAATATTTAGTTCTAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACATCACTTTATGTACTACTACTGTGTCAAAATATTTAGTTCTAAA  639

seq1  TAGCTCTGATGCATTTGATCCCTGGCCAGGCCCCACTGAACGGGGAAGAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTGATGCATTTGATCCCTGGCCAGGCCCCACTGAACGGGGAAGAG  689

seq1  AAAACCAAAATAGGTTTTGACAGCTTGAAGTGATGAATTGCTCTTTGATG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAATAGGTTTTGACAGCTTGAAGTGATGAATTGCTCTTTGATG  739

seq1  GTCAAACTTCAGTGATGGAGTGTGTTATAATGCTTGGCATTTATTTGGCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACTTCAGTGATGGAGTGTGTTATAATGCTTGGCATTTATTTGGCT  789

seq1  TACACTCTTGACCCTGGCTTGTGCTGAAGCCATCAGTCACATATGCTTGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCTTGACCCTGGCTTGTGCTGAAGCCATCAGTCACATATGCTTGT  839

seq1  CTGGCAGAGCTTTGGAACTTTTATCGACTGTCACATTTTTTAGCACATCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAGCTTTGGAACTTTTATCGACTGTCACATTTTTTAGCACATCT  889

seq1  TAAGTGATCAGCATTGGAGGACGACGTTTCCCTTGAAACCTGAGATGAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGATCAGCATTGGAGGACGACGTTTCCCTTGAAACCTGAGATGAAA  939

seq1  ATTCAGAGCAAGTTTTCGAAGAATTAGGTTGGTTGCTATCTTCTTGCTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGCAAGTTTTCGAAGAATTAGGTTGGTTGCTATCTTCTTGCTCA  989

seq1  AAGTACTGAGCACTTAAGTAATTATCATACAGTGAAACTGAAGCTGCTCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTGAGCACTTAAGTAATTATCATACAGTGAAACTGAAGCTGCTCA  1039

seq1  ATATGATGGAGGTGTTTATAAAGGAGGAACCAGTTATACATAGCGTGAAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGGAGGTGTTTATAAAGGAGGAACCAGTTATACATAGCGTGAAG  1089

seq1  ATGTAAGGCGGCTTAATTCTTTTCATCTGAGTGAAAGCATGCAGTGTCAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGGCGGCTTAATTCTTTTCATCTGAGTGAAAGCATGCAGTGTCAA  1139

seq1  TTCTGACTCGGTGGAATTC  1163
      |||||||||||||||||||
seq2  TTCTGACTCGGTGGAATTC  1158

seq1: chr10_104523711_104524699
seq2: B6Ng01-282D01.g_197_1175

seq1  CTTTATAACTATATGAGAGGAATTCCCACTGTTTTTCATCCCAGTTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAACTATATGAGAGGAATTCCCACTGTTTTTCATCCCAGTTTATG  50

seq1  GGACTGCAGTAGGAACCTGAACAGACTTAACCCTGAGGAATGCAGATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGCAGTAGGAACCTGAACAGACTTAACCCTGAGGAATGCAGATCCA  100

seq1  CCCTTGCCAGCCTGAATATGTTGAAATTCAGAACAGATTCAGACATATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGCCAGCCTGAATATGTTGAAATTCAGAACAGATTCAGACATATAA  150

seq1  GAAAGGTGAGTTTTCCCTTCTCAGCCCTCTCCTTCTCACCCTCCTCGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTGAGTTTTCCCTTCTCAGCCCTCTCCTTCTCACCCTCCTCGTCT  200

seq1  ACACTAATCACACGTGGAGCTAGGAAATCCAGAAGCTGCCCTTAATCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAATCACACGTGGAGCTAGGAAATCCAGAAGCTGCCCTTAATCATC  250

seq1  AGAACTTCTAGCGTTTGGCTTTCTGACTCCAGGACTAAGAAAAGTAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTCTAGCGTTTGGCTTTCTGACTCCAGGACTAAGAAAAGTAGACC  300

seq1  CCTCTCCTCTTCCCTCAATTCTCAGGCCTTGGGAATAAATCACTTCATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCTTCCCTCAATTCTCAGGCCTTGGGAATAAATCACTTCATTG  350

seq1  TCTTTCCTGTTTTCCTATTTGCAGTTAATAGATTGTGGGGCCTTTCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTGTTTTCCTATTTGCAGTTAATAGATTGTGGGGCCTTTCAGCT  400

seq1  TCCATACTTAGCAAGTCAATGTCCATAATTTATCTCTTTTTTTTATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATACTTAGCAAGTCAATGTCCATAATTTATCTCTTTTTTTTATATAC  450

seq1  CTATATACTCTCATTAATTCTGTCTTTCTGAGACCCATGATTAATATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATACTCTCATTAATTCTGTCTTTCTGAGACCCATGATTAATATAAT  500

seq1  CAGGTACCAGTTTATTCAAAGCAAAGCAAATTTTAATACTCGAACAGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTACCAGTTTATTCAAAGCAAAGCAAATTTTAATACTCGAACAGAAG  550

seq1  TGAATTTAATTTTAATATACTAAAAGTAAGCATAACCAATTGTGATTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTAATTTTAATATACTAAAAGTAAGCATAACCAATTGTGATTTCA  600

seq1  AGAACAAACATGCACACCAGTACAAAAATCACCACCATCTACAACAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAACATGCACACCAGTACAAAAATCACCACCATCTACAACAGACC  650

seq1  TTATTATAATGTAATCAATGAAAGTCAATAAGAGATTCAGTAAAATATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATAATGTAATCAATGAAAGTCAATAAGAGATTCAGTAAAATATAT  700

seq1  TTTTGCTTTGCCAACTTTTTCCTTAAAATTACAGAGAGTATTTAAGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTGCCAACTTTTTCCTTAAAATTACAGAGAGTATTTAAGTTTG  750

seq1  AGGACAATATGCAGTCTCGTGATTTCTAAATCGTA-GGGTGAAAGCATCA  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGGACAATATGCAGTCTCGTGATTTCTAAATCGTAGGGGTGAAAGCATCA  800

seq1  GAAAAGACAGGTAAACATCTGTGTATAGCTATGTTCTAAATTTTTTTAAA  849
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  GAAAAGACAGGTAAACATCTGTGTATAGCTATGTTCTAA--TTTTTTAAA  848

seq1  TATGAAAACAGGTAGCTTATATTTGATCTCTGTAAGTTAGTGGTGGGCGT  899
      |||| ||||| ||||||||||||||||||||||||| |||| ||||||||
seq2  TATG-AAACA-GTAGCTTATATTTGATCTCTGTAAG-TAGT-GTGGGCGT  894

seq1  CCCTACCCTAGAGACACAGGGGGGTGGGGATTACCCGAGTTATGGGGGAT  949
      ||||||| |||||||||||||||   ||||| ||||||||||||||||||
seq2  CCCTACCTTAGAGACACAGGGGG--TGGGATAACCCGAGTTATGGGGGAT  942

seq1  TAGAGACTTGTGAGTCTAAACCATGTCCCAGAATCAGCCT  989
       ||||||||||||||||||| |||||  ||  ||||||||
seq2  CAGAGACTTGTGAGTCTAAA-CATGT--CATGATCAGCCT  979