BAC Information

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BAC

Clone NameB6Ng01-282D19
Chromosome10 (Build37)
Map Location 97,923,854 - 97,924,714
singlet/doubletsinglet
Overlap genenone
Upstream geneDcn, Lum, Kera, Epyc, 4921510H08Rik, EG667438
Downstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282D19.bB6Ng01-282D19.g
ACCGA081508GA081509
length1,086924
definitionB6Ng01-282D19.b B6Ng01-282D19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatactttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccatttg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagctctgtagtaaattgctttaggtcaggcatggtgattccacca
gaggttcttttatccttgagaagagtttttgctatcctcggttttttgtt
tattccagatgaatttgcaaattgctcctttctaacttgttgaagaattc
agttggaattttgatggggattgcattgaaatctgtagattgcttttggc
aagatagccatttttacaatgttgatcctgccaatccatgagcatgggga
gatccttccatcttctgagatctcttttaatttctttcttcagagacttg
aagtttttaatcatacagatctttcacttcctttagttaagagtcacggc
cgaagatattttatattattgtgaacttattgagaggggtgttgttccct
aaattcctttctctagcctgttaattcctggtaataggagaaaaggcatt
tgaacttgtttggaggtttaattttaatatcgcaga
gaattcacaactgaggcacaggtctttaaatccagccagagatcatttgc
ttgcagaactgtgtaaacttttactggagggacaaagaaatgtcttttta
ttccaaggaagtcacaaatgacacatggcaaagataactccactcaaatt
tagcttggtgtaccagtgaatttagttagattcactttcgggagcatgga
taggtgaatggttccaaacaaggacatgagtgatttaaccaaggttaggg
tgctgatataaccatatggttgctgtatagcgccaacgttcagtggactt
ggtgaaactgggttacattcaaacatacccttttatccaacacaacatac
aaacatacccattacacccttctcttctttcaccctgtctcgattgcatt
agcaccttatgaacctgatttatatgctaatctaaagcactcaggtctac
tattctaactcataaatagcacatctaattatgggactcagcaaaaccac
taaggcttgtacaccagttccaaagtacctgttgaattaccctacttctt
aactgacctatgaacacaattcattctggtccaataaagtgtctctaaaa
caccaccctctatatatgctgttctctcaaaatgcccacccttgctaaat
taccttccaatcactcatacttatgggcatctcagccagtgataaccacg
cattgctaatggatcataagagcaggtctattagcgactgatttttcatt
tatttttgcctcaaggagagataggtacttatatttatttattatcttga
ctcccacagcacttaagactggtccaattttaatcagttctatacttcca
tttcatgtttacccagtcatactttctttctagctatttaccttgaaaag
attttgagtcattaaatcaacaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97923854_97924714
seq2: B6Ng01-282D19.g_68_935

seq1  GAATTCACAACTGAGGCACAGGTCTTTAAATCCAGCCAGAGATCATTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAACTGAGGCACAGGTCTTTAAATCCAGCCAGAGATCATTTGC  50

seq1  TTGCAGAACTGTGTAAACTTTTACTGGAGGGACAAAGAAATGTCTTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAACTGTGTAAACTTTTACTGGAGGGACAAAGAAATGTCTTTTTA  100

seq1  TTCCAAGGAAGTCACAAATGACACATGGCAAAGATAACTCCACTCAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGGAAGTCACAAATGACACATGGCAAAGATAACTCCACTCAAATT  150

seq1  TAGCTTGGTGTACCAGTGAATTTAGTTAGATTCACTTTCGGGAGCATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGGTGTACCAGTGAATTTAGTTAGATTCACTTTCGGGAGCATGGA  200

seq1  TAGGTGAATGGTTCCAAACAAGGACATGAGTGATTTAACCAAGGTTAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAATGGTTCCAAACAAGGACATGAGTGATTTAACCAAGGTTAGGG  250

seq1  TGCTGATATAACCATATGGTTGCTGTATAGCGCCAACGTTCAGTGGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATATAACCATATGGTTGCTGTATAGCGCCAACGTTCAGTGGACTT  300

seq1  GGTGAAACTGGGTTACATTCAAACATACCCTTTTATCCAACACAACATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAACTGGGTTACATTCAAACATACCCTTTTATCCAACACAACATAC  350

seq1  AAACATACCCATTACACCCTTCTCTTCTTTCACCCTGTCTCGATTGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATACCCATTACACCCTTCTCTTCTTTCACCCTGTCTCGATTGCATT  400

seq1  AGCACCTTATGAACCTGATTTATATGCTAATCTAAAGCACTCAGGTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTATGAACCTGATTTATATGCTAATCTAAAGCACTCAGGTCTAC  450

seq1  TATTCTAACTCATAAATAGCACATCTAATTATGGGACTCAGCAAAACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAACTCATAAATAGCACATCTAATTATGGGACTCAGCAAAACCAC  500

seq1  TAAGGCTTGTACACCAGTTCCAAAGTACCTGTTGAATTACCCTACTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTTGTACACCAGTTCCAAAGTACCTGTTGAATTACCCTACTTCTT  550

seq1  AACTGACCTATGAACACAATTCATTCTGGTCCAATAAAGTGTCTCTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACCTATGAACACAATTCATTCTGGTCCAATAAAGTGTCTCTAAAA  600

seq1  CACCACCCTCTATATATGCTGTTCTCTCAAAATGCCCACCCTTGCTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCCTCTATATATGCTGTTCTCTCAAAATGCCCACCCTTGCTAAAT  650

seq1  TACCTTCCAATCACTCATACTTATGGGCATCTCAGCCAGTGATAACCACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCCAATCACTCATACTTATGGGCATCTCAGCCAGTGATAACCACG  700

seq1  CATTGCTAATGGATCATAAGAGCAGGTCTATTAGCGACTGA-TTTTCA-T  748
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  CATTGCTAATGGATCATAAGAGCAGGTCTATTAGCGACTGATTTTTCATT  750

seq1  TATTTTTGCCTCAAGGAGAGATAGGTACTTATA-TTATTTATTATCTTGA  797
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATTTTTGCCTCAAGGAGAGATAGGTACTTATATTTATTTATTATCTTGA  800

seq1  CTCCCACAGCAC-TAAGACTGGTCCAATTTTAATCAGTTCTATAC-TCCA  845
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  CTCCCACAGCACTTAAGACTGGTCCAATTTTAATCAGTTCTATACTTCCA  850

seq1  -TTCATG-TTACCCAGTC  861
       |||||| ||||||||||
seq2  TTTCATGTTTACCCAGTC  868