BAC Information

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BAC

Clone NameB6Ng01-282E22
Chromosome10 (Build37)
Map Location 101,072,747 - 101,073,887
singlet/doubletsinglet
Overlap genenone
Upstream gene1700017N19Rik
Downstream geneMgat4c, LOC667652, Nts, Pamci
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282E22.bB6Ng01-282E22.g
ACCGA081560GA081561
length1,1241,179
definitionB6Ng01-282E22.b B6Ng01-282E22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataagtttacaataaatgtttccaatccaaacatacctctaaat
gggagtttgattagaaagagtctatggaggtccagtacccgtagtttgaa
attatataagaaaattcacagtatactcaaatgattccatggtatagtta
ttacagaaacaaactcagctttatctaataatatagaggacacagtatag
gatgatttgcttgttgaagttattacagcaccataaaaacactttttcaa
gcacatgcaaatatattatcatagaaaaatttagtagttgtttaatatat
cacataaaaatattcataaatacatatcaacttactgagtgaggatatta
aagcccacaactagtgctaatatttaatacattatcaaatataacaccat
taaaaaaggtaatgatttttagtgacatgttgcaatttgattagagctaa
ttaaagtaaatgattagagagtttactattttgtcttataaagaaacagt
gatttagatgttcattgcaatatttagaagataataaaattgcttctcta
taaacttttcctctgcaaataaagacagataattttgtgactgtaaataa
agtcatggtgttttcatgtatactgaaaaaaactaaggagcatgagtagt
ttaacaagcataaataacaaattttatttaagtaatcatcatgacatggg
gacttctagcatcagagaggttattcacaaggtccaagagagtggtgtct
tagccttaaacaccataacttttgaaatgatattttgacactacaagtat
tatggtagcaatctagctaaagattttatttactattaacatgctcttaa
gttaactgtattgttttgtgaccttttatttaattttcaatgattgtact
ataaacgacttcctgaagagaacatgaatggctcacataataaggtcaag
aattaataaatgggacctcatgaaaccaacaatctttaataagtcaaaag
aaccatcatcaggacaaacagcctgcagattgaaaaaagatcttcacatc
ctacatccatcagaggctatatcaaatagatagactcagagctgacatga
catcgaataatccagtaacatgag

gaattctcagctgaggaataccgaatggctgagaagcacttgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaagcaaccctgagac
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagt
cgatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgttcaaccactctggaaatcaattgggcagttccaca
gaaaattggacatagtactactggaggatcccacaatacctctcctgggc
atatattcagaagatgttccaactggtaagagggacacatgctccagtac
gttcatagcagccttatttataatagccagaatctggaaagaacccagat
gtctgtcaacagaggaatgggtacagaaaatgtggtacatttgcacaatg
gagtactaactcagctattaaaaaatgaatttatgaaattcctaggcaaa
ttaatggacctagagtgcatcatcctgagtgaggtaacctaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattagcccagaaact
tagaatgcctaatatacaagatacaatctgcaaaacacatgaaactcaag
aagaacgaagaccaaaatgtggacattttgccccttcttcgaattgggaa
caaaatacccatggaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagagactgccatacccggggatccttcccataatc
agactctaaacgctgacaccattgcatacacttgcaaaattttgctgaat
ttgacccagatatgtctatctcttgtgaggctatgctggggcctaacaaa
cagagaagtgggatgctcacagtcaactactggatggatcacaggtcccc
aatggaaggagccagaagaaagtctcacagaaattaaaagggtctgtaac
ccctgtagtgagcaacaatatgaactaacagtacccccccccaaaaaaaa
acccttcctgttttctagctgcaatatgtatcagaagaattgactaagtc
tgccatcaatgcaagagaaggtcataggtgcacctttatatgctcagtac
cagggaatttctcaaaggcctctaggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101072747_101073887
seq2: B6Ng01-282E22.b_44_1167

seq1  GAATTCATAAGTTTACAATAAATGTTTCCAATCCAAACATACCTCTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGTTTACAATAAATGTTTCCAATCCAAACATACCTCTAAAT  50

seq1  GGGAGTTTGATTAGAAAGAGTCTATGGAGGTCCAGTACCCGTAGTTTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTTGATTAGAAAGAGTCTATGGAGGTCCAGTACCCGTAGTTTGAA  100

seq1  ATTATATAAGAAAATTCACAGTATACTCAAATGATTCCATGGTATAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAAGAAAATTCACAGTATACTCAAATGATTCCATGGTATAGTTA  150

seq1  TTACAGAAACAAACTCAGCTTTATCTAATAATATAGAGGACACAGTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAAACAAACTCAGCTTTATCTAATAATATAGAGGACACAGTATAG  200

seq1  GATGATTTGCTTGTTGAAGTTATTACAGCACCATAAAAACACTTTTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTGCTTGTTGAAGTTATTACAGCACCATAAAAACACTTTTTCAA  250

seq1  GCACATGCAAATATATTATCATAGAAAAATTTAGTAGTTGTTTAATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCAAATATATTATCATAGAAAAATTTAGTAGTTGTTTAATATAT  300

seq1  CACATAAAAATATTCATAAATACATATCAACTTACTGAGTGAGGATATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAAAATATTCATAAATACATATCAACTTACTGAGTGAGGATATTA  350

seq1  AAGCCCACAACTAGTGCTAATATTTAATACATTATCAAATATAACACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCACAACTAGTGCTAATATTTAATACATTATCAAATATAACACCAT  400

seq1  TAAAAAAGGTAATGATTTTTAGTGACATGTTGCAATTTGATTAGAGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGGTAATGATTTTTAGTGACATGTTGCAATTTGATTAGAGCTAA  450

seq1  TTAAAGTAAATGATTAGAGAGTTTACTATTTTGTCTTATAAAGAAACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAAATGATTAGAGAGTTTACTATTTTGTCTTATAAAGAAACAGT  500

seq1  GATTTAGATGTTCATTGCAATATTTAGAAGATAATAAAATTGCTTCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGATGTTCATTGCAATATTTAGAAGATAATAAAATTGCTTCTCTA  550

seq1  TAAACTTTTCCTCTGCAAATAAAGACAGATAATTTTGTGACTGTAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTTCCTCTGCAAATAAAGACAGATAATTTTGTGACTGTAAATAA  600

seq1  AGTCATGGTGTTTTCATGTATACTGAAAAAAACTAAGGAGCATGAGTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGTGTTTTCATGTATACTGAAAAAAACTAAGGAGCATGAGTAGT  650

seq1  TTAACAAGCATAAATAACAAATTTTATTTAAGTAATCATCATGACATGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAGCATAAATAACAAATTTTATTTAAGTAATCATCATGACATGGG  700

seq1  GACTTCTAGCATCAGAGAGGTTATTCACAAGGTCCAAGAGAGTGGTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTAGCATCAGAGAGGTTATTCACAAGGTCCAAGAGAGTGGTGTCT  750

seq1  TAGCCTTAAACACCATAACTTTTGAAATGATATTTTGACACTACAAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTAAACACCATAACTTTTGAAATGATATTTTGACACTACAAGTAT  800

seq1  TATGGTAGCAATCTAGCTAAAGATTTTATTTACTATTAACATGCTCTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAGCAATCTAGCTAAAGATTTTATTTACTATTAACATGCTCTTAA  850

seq1  GTTAACTGTATTGTTTTGTGACCTTTTATTTAATTTTCAATGATTGTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACTGTATTGTTTTGTGACCTTTTATTTAATTTTCAATGATTGTACT  900

seq1  ATAAACGACTTCCTGAAGAGAACATGAATGGCTCACATAATAAGGTCAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACGACTTCCTGAAGAGAACATGAATGGCTCACATAATAAGGTCAAG  950

seq1  AATTAATAAATGGGACCTCATGAAACCAACAATCTTTAATAAGTCAAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAAATGGGACCTCATGAAACCAACAATCTTTAATAAGTCAAAAG  1000

seq1  AAACCATCATCAGGACAAAACAGCCTGCAGATTGAAAAAAGATCTTCACA  1050
       ||||||||||||||| |||||||||||||||||||||||||||||||| 
seq2  -AACCATCATCAGGAC-AAACAGCCTGCAGATTGAAAAAAGATCTTCAC-  1047

seq1  ACCCTACATCCATCAGAGGGCTAATATCCAAATTAGATAAGAACTCAAGA  1100
      | ||||||||||||||| |||| |||||  || ||||||   |||||   
seq2  ATCCTACATCCATCAGA-GGCT-ATATC--AAATAGATA--GACTCA--G  1089

seq1  AGCTGGACAATGACAATCCAAATAATCCAGTTAACAATGAG  1141
      |||| ||| ||||||   | |||||||||| |||| |||||
seq2  AGCT-GAC-ATGACA--TCGAATAATCCAG-TAAC-ATGAG  1124


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