BAC Information

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BAC

Clone NameB6Ng01-283D13
Chromosome10 (Build37)
Map Location 100,243,956 - 100,245,124
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283D13.bB6Ng01-283D13.g
ACCGA082237GA082238
length8601,160
definitionB6Ng01-283D13.b B6Ng01-283D13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccaaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaacccagagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatgagtctggtggttcctca
gaaaattggacatagtactactggaggatcctgcaatacctctcctgggc
ttatatccagaagatgtcccaaccagtaagaaggtcacatgctccactat
gttcatagcagccttatttataattgccagaagctggaaagaacccaaat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattccttggcaa
atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgataagtgtatactagcccagaaac
ttagtatagcgagatataaggtacaatttgcaaaacacatgaaactgaag
aagaaagaagaccaaagtgtggacactttgccccttcttagaattggaaa
caatcacccatggaaaggagttacagagacaaagtttggagctgagacaa
aaggatggaccatctagatactgccatatccagggatccattccataatt
agcctgaaatgatgacaccattgtaagaaggtcacatgctccactatgtt
catagcagcc
gaattcaagatgccaatcctttggaatgtatgctgtggggatttggggat
acttgcaaaataaaatgcacaatgtgaatataatagtggaatcggattta
actgatggagaaggagaacaaggtctaacagaaatgagattagtgcctgg
ggcataaaggaaagcatcgctggaaaagtccctccacagaatgaagagat
aatgaaattaggaagacactttttaagaccctggagaggactcatgactg
ctagaaatttgtgaatatgcatcaaagtagaactcagttgaaatttccca
taaacaagagattgctgggtgtggttggatcaggagagggtccctctctc
aaatctctctcacagtccctacttactctcaagttgacagattatttttc
cttgattattactgttatatacacatattcatatttttatgtgcatatac
atacatagcatactgagttcatttttgccggtgatgtatagacaattaaa
aatctgaccattcagcattgcatcaccaagggtaatctcacatttcacat
catttggtgaggtgagttttcttcctctcagcagccatttagttgccttt
agttctttactataagtgagaccttatgaagattttttccaggttaatat
atccatttgtattgctatttccagcctagtttacatagcttcaattgtag
agacgagttcacagaattcttcccagtattctgattcttataaccttctc
ttcctgcttcttctgctgtattgttcttttagcaataattacagaagcta
tgatatagatgtatttgtgagggatgagctttcatcccatttcctgatgg
ctgcactgtttccagttgtgagtatctgtgatggtcttcatttggtacaa
aatgaggctctttagagaggggaggtagctagctacattacccagcaaag
ttgacttgtgtgtgcattttccttttttttttttttctataacatgattc
taacttgtgaaatggcattttaagtagttttatttgtatatcacagatga
ttataacggacattcctcattttttccctagtcaattgaatcacatatga
ctgtattcttggaatttatgtgcacgattacagcttagtgactgacgtaa
ttgaagatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_100243956_100245124
seq2: B6Ng01-283D13.g_64_1223

seq1  GAATTCAAGATGCCAATCCTTTGGAATGTATGCTGTGGGGATTTGGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGATGCCAATCCTTTGGAATGTATGCTGTGGGGATTTGGGGAT  50

seq1  ACTTGCAAAATAAAATGCACAATGTGAATATAATAGTGGAATCGGATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAAAATAAAATGCACAATGTGAATATAATAGTGGAATCGGATTTA  100

seq1  ACTGATGGAGAAGGAGAACAAGGTCTAACAGAAATGAGATTAGTGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGGAGAAGGAGAACAAGGTCTAACAGAAATGAGATTAGTGCCTGG  150

seq1  GGCATAAAGGAAAGCATCGCTGGAAAAGTCCCTCCACAGAATGAAGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAAAGGAAAGCATCGCTGGAAAAGTCCCTCCACAGAATGAAGAGAT  200

seq1  AATGAAATTAGGAAGACACTTTTTAAGACCCTGGAGAGGACTCATGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATTAGGAAGACACTTTTTAAGACCCTGGAGAGGACTCATGACTG  250

seq1  CTAGAAATTTGTGAATATGCATCAAAGTAGAACTCAGTTGAAATTTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATTTGTGAATATGCATCAAAGTAGAACTCAGTTGAAATTTCCCA  300

seq1  TAAACAAGAGATTGCTGGGTGTGGTTGGATCAGGAGAGGGTCCCTCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAGAGATTGCTGGGTGTGGTTGGATCAGGAGAGGGTCCCTCTCTC  350

seq1  AAATCTCTCTCACAGTCCCTACTTACTCTCAAGTTGACAGATTATTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTCTCACAGTCCCTACTTACTCTCAAGTTGACAGATTATTTTTC  400

seq1  CTTGATTATTACTGTTATATACACATATTCATATTTTTATGTGCATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTATTACTGTTATATACACATATTCATATTTTTATGTGCATATAC  450

seq1  ATACATAGCATACTGAGTTCATTTTTGCCGGTGATGTATAGACAATTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAGCATACTGAGTTCATTTTTGCCGGTGATGTATAGACAATTAAA  500

seq1  AATCTGACCATTCAGCATTGCATCACCAAGGGTAATCTCACATTTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGACCATTCAGCATTGCATCACCAAGGGTAATCTCACATTTCACAT  550

seq1  CATTTGGTGAGGTGAGTTTTCTTCCTCTCAGCAGCCATTTAGTTGCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGTGAGGTGAGTTTTCTTCCTCTCAGCAGCCATTTAGTTGCCTTT  600

seq1  AGTTCTTTACTATAAGTGAGACCTTATGAAGATTTTTTCCAGGTTAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTACTATAAGTGAGACCTTATGAAGATTTTTTCCAGGTTAATAT  650

seq1  ATCCATTTGTATTGCTATTTCCAGCCTAGTTTACATAGCTTCAATTGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTGTATTGCTATTTCCAGCCTAGTTTACATAGCTTCAATTGTAG  700

seq1  AGACGAGTTCACAGAATTCTTCCCAGTATTCTGATTCTTATAACCTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGAGTTCACAGAATTCTTCCCAGTATTCTGATTCTTATAACCTTCTC  750

seq1  TTCCTGCTTCTTCTGCTGTATTGTTCTTTTAGCAATAATTACAGAAGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTTCTTCTGCTGTATTGTTCTTTTAGCAATAATTACAGAAGCTA  800

seq1  TGATATAGATGTATTTGTGAGGGATGAGC-TTCATCCCATTTCCTGATGG  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGATATAGATGTATTTGTGAGGGATGAGCTTTCATCCCATTTCCTGATGG  850

seq1  CTGCACTGTTTCCAGTTGTGAGTATCTGTGATGGTCTTCATTTGGTACAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGTTTCCAGTTGTGAGTATCTGTGATGGTCTTCATTTGGTACAA  900

seq1  AATGAGGCTCTTTAGAGAGGGGAGGTAGCTAGCTACATTACCCAGCAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCTCTTTAGAGAGGGGAGGTAGCTAGCTACATTACCCAGCAAAG  950

seq1  TTGACTTGTGTGGTGCATTTTCC--TTTTTTTTTTTTCTATAACAATGAT  997
      ||||||||||| |||||||||||  ||||||||||||||||||| |||||
seq2  TTGACTTGTGT-GTGCATTTTCCTTTTTTTTTTTTTTCTATAAC-ATGAT  998

seq1  TCTAACTTGTGAAATGGCATTTTAAGTAGTTTTTATTTGTATATCACAGA  1047
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTAACTTGTGAAATGGCATTTTAAGTAG-TTTTATTTGTATATCACAGA  1047

seq1  TGATTAATAAAGGACATTTCCTCATTTTTTCCCTTAAGTC-ATTG-ATCA  1095
      ||||| |||| ||||| |||||||||||||||||  |||| |||| ||||
seq2  TGATT-ATAACGGACA-TTCCTCATTTTTTCCCT--AGTCAATTGAATCA  1093

seq1  CATATTAAATGTATTCTTTGGTATTTTATGTGCAACGGTATTACAGCTTA  1145
      |||| | | |||||||||  | | ||||||||| |||  |||||||||| 
seq2  CATA-TGACTGTATTCTT--GGAATTTATGTGC-ACG--ATTACAGCTT-  1136

seq1  AGTGACTTAGAGGATTGAAGATCT  1169
      ||||||| |    |||||||||||
seq2  AGTGACTGACGTAATTGAAGATCT  1160