BAC Information

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BAC

Clone NameB6Ng01-283G09
Chromosome10 (Build37)
Map Location 32,158,816 - 32,159,828
singlet/doubletsinglet
Overlap geneTcba1
Upstream geneTpd52l1, Ibrdc1, LOC666055, LOC667752, LOC100040638
Downstream geneEG667761, Trdn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283G09.bB6Ng01-283G09.g
ACCGA082370GA082371
length1,2101,031
definitionB6Ng01-283G09.b B6Ng01-283G09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgcaccccattttgaatagggttatttgattc
tcttgagtctaacttcttgagttctttgtacatattggatattagcactc
tatcggatgtaggattggtaaagatcttttctcaatctgttggttgccat
tttgtcccattgacagtgtcctttgccttacaaagctttgtaattttatg
aggtcccatttgtctatttttcatcacagagcataagccattggtgttct
gttcaggaaaatttttcctgtgaccatgtgttcgaggctctttcctactt
tctttttctattagtttcagtgtatcttgttttatgtgaaggtccttgat
ccacttggacttgagctttgtacaaggagataagaatggatcgatgattt
gcattcttcaatattctgacaaccagttgaaacagcaccatttgttgaaa
atgatgtcttttttccactagatagttttagctcctttaccaaagatcaa
gtgaccataggtgtgtgggttcacttctgggtcttcaattctattccgtt
gattttcctgcctgtctctgtaccaataccatatacttggtttttatttg
attgtttgttgtttatttatcactattgctctgtaatacagctttagatc
agggagggtgattcccttagacgttcttttactgttgagaataatttttg
ctatcctgggactatccttagtcatcagagaaatgcaaattaaaacaact
ctgacattcctcatacctgtcagaattgctaagataaaaaattcagtgac
agcagatgctggcaaggatgtggagaaagaggaacacttctccattgttg
gtgggattgcaagcttgtactaccactctggaaatcagtctggtgattcc
tcagaaaattggacatagtattaccataggatccagcaatatctctcctg
ggcatatatccagaagagttccactgataataataaccacatgctccact
atgttcataagaagccttatttataatagcccagaaagctggaaagatcc
agatgtccctccaacataggaatgggaattcacggaaaatgtagtatatt
tacacccaatggaggtacctacctcagctattaaaaaaccaatgaattat
gatccctaaggcaatggatggaatctgttcagggatatcactactccctc
ggaagtgaag
gaattcttcatatgttcatataagactttgtgaaacttccataacctgct
aacaatagagtgcttatctgattttgatttctaaaagggcttcatttggt
gtgtgtctgtatatgtgtatgtatatgtgtatgtttctttgtgtgtatgt
gtctgtgtgtgtgtttgtatgtgtacgtacatgagcacacatatatggtc
atagcagaggcccaaggacaactctcaggaataggttctctcctgtcacc
ctgacaggtctgaggtaaaactcaggtcatcaggacaccagcctctgcca
actcaaccatcttgctgtccttgcctttctgaggtcaaacatgcagttaa
gtgatgtctatctagtaatttgaagccaaggacatgattacatttcactc
tacagagataatgtatgtgatttgctgttttgaaaaagacacagatactg
ggtcaccttatgaacatttccatacagatgattctgtattttcacaaact
cattcatagagcttcaaaatgaaggcttgcattgtatttctttaatatga
gaaaaaatacaagaaggggtgatcaattatggatactgaatgagaagaag
cccatcacagcccttcagcagagtgttcaatattcttttgttgttcattg
atgcataaacaaactatatggattttttttattttgctcacaatatagtt
gaagctttcatcataggcagagccagttataggatgaatatatcaaaaac
acatacttccctgcttggtttcagaaacatgacagtctctgttctgtttc
taatttatccagctgttattatacattggaggtgagtaccatttcctgga
actaggctgctgcctctctctaccggatataataaataataataataata
ataataataagtctattttttcaccaaattccgtgggtgaaaaggaatca
gtggattaaccctttgaagctacggagataatttgcgacaaaatgcttgt
gatgtattgccgaaatgtttgccatctgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32158816_32159828
seq2: B6Ng01-283G09.g_63_1093 (reverse)

seq1  TCGCAG-TGGC-AACATTTC-GCTAT-CCTCAC-AGCATTTTGTC-CAAA  44
      | |||| |||| |||||||| || || | |||| ||||||||||| ||||
seq2  TAGCAGATGGCAAACATTTCGGCAATACATCACAAGCATTTTGTCGCAAA  50

seq1  TTATCTCTG-AGCT--CAAGGGTTAAT-CACTGATTCCTTTTCACCCACT  90
      ||||||| | ||||   |||||||||| ||||||||||||||||||||| 
seq2  TTATCTCCGTAGCTTCAAAGGGTTAATCCACTGATTCCTTTTCACCCACG  100

seq1  GAATTTGCTG--AAAATAGACTTATTATTATTATTATTATTATTA-TTAT  137
      ||||||| ||  ||||||||||||||||||||||||||||||||| ||||
seq2  GAATTTGGTGAAAAAATAGACTTATTATTATTATTATTATTATTATTTAT  150

seq1  TATATCGGTTTGGAAGA-GCAGCAGCTTAG-TCCAGGAAATGGTACTCAC  185
      |||||| | | |  ||| |||||||| ||| |||||||||||||||||||
seq2  TATATCCGGTAGAGAGAGGCAGCAGCCTAGTTCCAGGAAATGGTACTCAC  200

seq1  CTCCAATGTAT-ATAACAGCTGGATAAATTAGAAACAGAACAGAGACTGT  234
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATGTATAATAACAGCTGGATAAATTAGAAACAGAACAGAGACTGT  250

seq1  CATGTTTCTG-AACCAAGCAGGGAAGTATGTGTTTTTGATATATTCATCC  283
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTCTGAAACCAAGCAGGGAAGTATGTGTTTTTGATATATTCATCC  300

seq1  TATAACTGGCTCTGCCTATGATGAAAGCTTCAACTATATTGTGAGC-AAA  332
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TATAACTGGCTCTGCCTATGATGAAAGCTTCAACTATATTGTGAGCAAAA  350

seq1  TAAAAAAAATCCATATAGTTTGTTTATGCATCAATGAACAACAAAAGAAT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAATCCATATAGTTTGTTTATGCATCAATGAACAACAAAAGAAT  400

seq1  ATTGAACACTCTGCTGAAGGGCTGTGATGGGCTTCTTCTCATTCAGTATC  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACACTCTGCTGAAGGGCTGTGATGGGCTTCTTCTCATTCAGTATC  450

seq1  CATAATTGATCACCCCTTCTTGTATTTTTTCTCATATTAAAGAAATACAA  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTGATCACCCCTTCTTGTATTTTTTCTCATATTAAAGAAATACAA  500

seq1  TGCAAGCCTTCATTTTGAAGCTCTATGAATGAGTTTGTGAAAATACAGAA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCCTTCATTTTGAAGCTCTATGAATGAGTTTGTGAAAATACAGAA  550

seq1  TCATCTGTATGGAAATGTTCATAAGGTGACCCAGTATCTGTGTCTTTTTC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTATGGAAATGTTCATAAGGTGACCCAGTATCTGTGTCTTTTTC  600

seq1  AAAACAGCAAATCACATACATTATCTCTGTAGAGTGAAATGTAATCATGT  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGCAAATCACATACATTATCTCTGTAGAGTGAAATGTAATCATGT  650

seq1  CCTTGGCTTCAAATTACTAGATAGACATCACTTAACTGCATGTTTGACCT  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTTCAAATTACTAGATAGACATCACTTAACTGCATGTTTGACCT  700

seq1  CAGAAAGGCAAGGACAGCAAGATGGTTGAGTTGGCAGAGGCTGGTGTCCT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGCAAGGACAGCAAGATGGTTGAGTTGGCAGAGGCTGGTGTCCT  750

seq1  GATGACCTGAGTTTTACCTCAGACCTGTCAGGGTGACAGGAGAGAACCTA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCTGAGTTTTACCTCAGACCTGTCAGGGTGACAGGAGAGAACCTA  800

seq1  TTCCTGAGAGTTGTCCTTGGGCCTCTGCTATGACCATATATGTGTGCTCA  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAGAGTTGTCCTTGGGCCTCTGCTATGACCATATATGTGTGCTCA  850

seq1  TGTACGTACACATACAAACACACACACAGACACATACACACAAAGAAACA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACGTACACATACAAACACACACACAGACACATACACACAAAGAAACA  900

seq1  TACACATATACATACACATATACAGACACACACCAAATGAAGCCCTTTTA  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATATACATACACATATACAGACACACACCAAATGAAGCCCTTTTA  950

seq1  GAAATCAAAATCAGATAAGCACTCTATTGTTAGCAGGTTATGGAAGTTTC  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAAAATCAGATAAGCACTCTATTGTTAGCAGGTTATGGAAGTTTC  1000

seq1  ACAAAGTCTTATATGAACATATGAAGAATTC  1013
      |||||||||||||||||||||||||||||||
seq2  ACAAAGTCTTATATGAACATATGAAGAATTC  1031