BAC Information

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BAC

Clone NameB6Ng01-283J17
Chromosome10 (Build37)
Map Location 9,768,150 - 9,769,235
singlet/doubletsinglet
Overlap geneLOC100039238
Upstream geneEG666625, LOC666636, E130306M17Rik, LOC666658, LOC620417, Stxbp5
Downstream geneLOC665110, 9130014G24Rik, Rab32, EG382450, Grm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283J17.bB6Ng01-283J17.g
ACCGA082527GA082528
length1,0811,172
definitionB6Ng01-283J17.b B6Ng01-283J17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttttgtttccacccctttactcaatcataatactttgacaaa
ataaatccaaccatgctcaccagctcagaaaccaattcttctcacccgtc
caccttcttgccatatatgctgttccagccttcttccacccttcctgcac
actggacttagctgtgttttgcagacttatgtgctctgaacctcgcagct
ttgcttacatggctccctgatcttatcccagtctccacctagtcatagtc
tacagcactcaaggcccagctgtaatgtcaagtttgtagtgaagccatcc
cttaagtgacccaaacagaccaaaatgctcccatgtgtatttctccacag
gctattcaaagaactgtgaaggggtcacatggctgcccactattagaatc
atttgcttctggagtttttcacttatgtttatattctgtggatagaaatc
ttgtctcaatgatgtacacatccagactgcccatcattctccttgacttc
taggagctgaataaagatttaaaagaaaatgaaggccttgtacctgttat
tctagatgatgattcctatcagaattcatctacaaagctcacatcttaat
tcccattcttctggaaaaaaattcttcccatctgcttcagatcaattgtc
atcctctactttgaacttatgcgctacttattatagctgtctttcatctg
acagttataatatattgtgttgtaatttcaatatcttcttttcacatatc
tgtaactcaatgtcacccacagcctaacacctgtaatatctgagtgtgtc
tcaaaccccttcctgacaatcctacacctgctaggtgactccagaaaatt
ctaggaagacatttgtgctccattatctccagttccgaccctctttagaa
ttgattcagtacatagatcctcttactcccctcccatgttattcattttc
tactcctgggccagtttagaagtcataatcaccctctcttgcatctaata
aataaaaacacgtaagccacggatactcttcataaaaagttttgcataaa
tggctattaccaaagcttgagaaaaaacaca

gaattccagatctcttcttttaacatgaaggggtgttgtattttgtcaaa
tagtgcaatccccatcaaaatccccacataattctacaaagatatggaaa
gagcaattctcaaattcatctggaaaggcaaaaaacccagaatagcaaaa
acaacccttaaaagaatggctgggggaaatcaccatccctgatctcaagc
tttaatacagaggaacagtaataaaacctgcatggtgttggtacagaggc
agacatgctgatcaatggaatagaattgaagactcaggaattaaaaccac
acacttatgcacacttgatctttggcaaagatgccaaaaatatacaatgg
aaaaaagaaagcatcttcaataaacggtgttggtctaactggatgtctgt
ctgtagaagaatgaaaatagacccatatttgtcacctttcacaaagctca
agtccaagtggatcaaggacctcaacataaaaccagataccctgaatcaa
atagaagggaaagtgggaaagagccttgaactcattggcacagggggaag
tttactaaacagaactccaaaggctcaagctctaagatcagcaattgata
aagggacctcatgaaactggaaagtttctgtaaggtaaaggacatagctg
agaaaacaaatcagcaacctacagattaggaaaaaaatcttcactaaccc
cacatccaatagaaggctaatattcaaaatatataaagaactcaagaagc
taaccaccaaaaaaccaaataactcaatcaaaaaatgaggtctaaaacta
aacctagaattcacaacagaggaatcttaaatggctgagaagcacctaaa
gacatgttcaaagcccttagtgatcagagaaatgaaaatcaaaacaaccc
tgagatccaccttacactgatcagaatgactaagatcaaaaccacaggtg
acagcacatattgtagaggatgtggaggaagaggagcacctcctccatgg
ctggtgagattcatactgtacatcactctgaaatcaatctgttgtctcag
aaaactgaatagatctactgaagattcagctaataccactctgggaatat
aaccaaagatgctacaccatgccaggaagcacagttcacttagttctcat
taggcgggcctgtgttttgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_9768150_9769235
seq2: B6Ng01-283J17.b_40_1120 (reverse)

seq1  TGTGTGTTTTTCTCAAGCTTTTGGTAAATTAGGCCATTTATGCAAAACTT  50
      ||||| |||||||||||| ||||||||  || ||||||||||||||||||
seq2  TGTGT-TTTTTCTCAAGC-TTTGGTAA--TA-GCCATTTATGCAAAACTT  45

seq1  TTTATGAAGAGTATCCGTGGCTTACGTTGTTTTTATTTATTAGATGCAAG  100
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTATGAAGAGTATCCGTGGCTTACG-TGTTTTTATTTATTAGATGCAAG  94

seq1  AGAGGGTGATTATGACTTCTAAACTGG-CCAGGAGTAGAAAATGAATAAC  149
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGAGGGTGATTATGACTTCTAAACTGGCCCAGGAGTAGAAAATGAATAAC  144

seq1  ATGGGAGGGGAGTAAGAGGATCTATGTACTGAATCAATTCTAAAGAGGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGGGGAGTAAGAGGATCTATGTACTGAATCAATTCTAAAGAGGGT  194

seq1  CGGAACTGGAGATAATGGAGCACAAATGTCTTCCTAGAATTTTCTGGAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAACTGGAGATAATGGAGCACAAATGTCTTCCTAGAATTTTCTGGAGT  244

seq1  CACCTAGCAGGTGTAGGATTGTCAGGAAGGGGTTTGAGACACACTCAGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGCAGGTGTAGGATTGTCAGGAAGGGGTTTGAGACACACTCAGAT  294

seq1  ATTACAGGTGTTAGGCTGTGGGTGACATTGAGTTACAGATATGTGAAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGGTGTTAGGCTGTGGGTGACATTGAGTTACAGATATGTGAAAAG  344

seq1  AAGATATTGAAATTACAACACAATATATTATAACTGTCAGATGAAAGACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTGAAATTACAACACAATATATTATAACTGTCAGATGAAAGACA  394

seq1  GCTATAATAAGTAGCGCATAAGTTCAAAGTAGAGGATGACAATTGATCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAATAAGTAGCGCATAAGTTCAAAGTAGAGGATGACAATTGATCTG  444

seq1  AAGCAGATGGGAAGAATTTTTTTCCAGAAGAATGGGAATTAAGATGTGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGATGGGAAGAATTTTTTTCCAGAAGAATGGGAATTAAGATGTGAG  494

seq1  CTTTGTAGATGAATTCTGATAGGAATCATCATCTAGAATAACAGGTACAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGATGAATTCTGATAGGAATCATCATCTAGAATAACAGGTACAA  544

seq1  GGCCTTCATTTTCTTTTAAATCTTTATTCAGCTCCTAGAAGTCAAGGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCATTTTCTTTTAAATCTTTATTCAGCTCCTAGAAGTCAAGGAGA  594

seq1  ATGATGGGCAGTCTGGATGTGTACATCATTGAGACAAGATTTCTATCCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGCAGTCTGGATGTGTACATCATTGAGACAAGATTTCTATCCAC  644

seq1  AGAATATAAACATAAGTGAAAAACTCCAGAAGCAAATGATTCTAATAGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAAACATAAGTGAAAAACTCCAGAAGCAAATGATTCTAATAGTG  694

seq1  GGCAGCCATGTGACCCCTTCACAGTTCTTTGAATAGCCTGTGGAGAAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCATGTGACCCCTTCACAGTTCTTTGAATAGCCTGTGGAGAAATA  744

seq1  CACATGGGAGCATTTTGGTCTGTTTGGGTCACTTAAGGGATGGCTTCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGAGCATTTTGGTCTGTTTGGGTCACTTAAGGGATGGCTTCACT  794

seq1  ACAAACTTGACATTACAGCTGGGCCTTGAGTGCTGTAGACTATGACTAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTGACATTACAGCTGGGCCTTGAGTGCTGTAGACTATGACTAGG  844

seq1  TGGAGACTGGGATAAGATCAGGGAGCCATGTAAGCAAAGCTGCGAGGTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACTGGGATAAGATCAGGGAGCCATGTAAGCAAAGCTGCGAGGTTC  894

seq1  AGAGCACATAAGTCTGCAAAACACAGCTAAGTCCAGTGTGCAGGAAGGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACATAAGTCTGCAAAACACAGCTAAGTCCAGTGTGCAGGAAGGGT  944

seq1  GGAAGAAGGCTGGAACAGCATATATGGCAAGAAGGTGGACGGGTGAGAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGGCTGGAACAGCATATATGGCAAGAAGGTGGACGGGTGAGAAG  994

seq1  AATTGGTTTCTGAGCTGGTGAGCATGGTTGGATTTATTTTGTCAAAGTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTTTCTGAGCTGGTGAGCATGGTTGGATTTATTTTGTCAAAGTAT  1044

seq1  TATGATTGAGTAAAGGGGTGGAAACAAAAGAGAATTC  1086
      |||||||||||||||||||||||||||||||||||||
seq2  TATGATTGAGTAAAGGGGTGGAAACAAAAGAGAATTC  1081


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