BAC Information

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BAC

Clone NameB6Ng01-283P12
Chromosome10 (Build37)
Map Location 104,337,646 - 104,462,854
singlet/doubletdoublet
Overlap geneLOC100042383
Upstream geneEG627488, EG667692, EG667695, LOC100043292
Downstream geneTmtc2, EG627573, BC067068, Ccdc59
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283P12.bB6Ng01-283P12.g
ACCGA082790GA082791
length1,1091,051
definitionB6Ng01-283P12.b B6Ng01-283P12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,461,737 - 104,462,854)(104,337,646 - 104,338,701)
sequence
gaattcctagatgaaggtactttcttgcaaaggtatacatgccttggtag
aaagtattatataaataatttgtaggaaaacacaaactcagtatgaaagc
agatgtggtactttacaagaacatcaatggggccatgcagttgttaactt
ttgaaccagcacatttaaaggaaaaacgttggcagaggaaagcctatctc
ttgggagtacaggctagaccatctgtcaaagggagaattgaaaccatatt
tcaattagtggtggtcattggtcatgtggtgatgatttctgcagagaaat
tggacagattgtggcatagtctactatcttatctcatgctcaggcttcag
acattcattaggaaagacaattttctgtgtaggatttgatcagtgtttta
aaatgtgattatgggagaggcaggaactctgcagacttcagttggataaa
aacatcgttcggaacaggggatgaatactttgtgttggatctgagtccca
gtaatcagctgaaagacctttaagaccaaatgcagggacactttcaattc
tgcaaaaacaaaagcaaaaacaaaaacaaaaacaaaaaaaccaaaaaacc
aaaaaacaaacaaagaaataaaaaatgagagagattgagagagagagaga
gagaagagagagaagagagagaagaaattatttacttatttgttagataa
gaaaaactacagatgaatcattaactagaatctaactagaaaaatcatta
aaaaaaaagatgtgatttgggagaaaggaccctttgaggaagctattatt
acatttaatagaaatatctcaaattacctattgtctctttcagatatgat
tgtacatgtggataatctctaaataccattattaatcttgaatactgaaa
atgtatacatgtgaacaaatatattgctgtatccatttttgtattttaaa
tctcatgtatgttaatattaatcatatttatgttgagcagtagatcttat
ggggttgagaaagaaacttttttctataatttcagcaggaaagttttttg
gcatgtcatacgtacatgtttataattaaatttcttgataccttaataac
atttatata
gaattcttagagtcatgtatgaatccttttatatcaactgcaaatggagt
tattttgccttcttcccttatctttgattccaatttgtatccctttgtta
tccctcagatatcttattgttctagttaagacttcaagaactatattgaa
taggtacagaacgaatggacagccttgtcttgttcctgattttaatggaa
ttgcttttagtttctctcaaattaacatgatgttgttataggtttgttgt
aagctgcctttattatgtttttttttttcctgaagaggacgtagattcaa
ttcctagtaaccacatggtgatttataaccatcactaactccagtttcaa
aaactgtgatactcttttgtgacttccacagtcatcaagcacatacatga
tgcatatatatacattccatcgaatcactcacaaaattagtaaatctaat
aaaatgtttaaaaatattcaagattttccattacaatttaaatgcatcat
ttcttttaattgttttatcctgtccatcttcttcctggattcctagtgct
agatgcaactgtataaaacagtgatactttatcagaaatcaatcatgtta
ttttcatatattatgcacaatataggccttaaaatactagtgaagagggg
atgttcctcccctcttgtctgtctcctcagagatgtggtaacacagcagc
tcttcctgatatgctattatttaaaaactgctcttgtcccagaactccaa
gaatattagatttagagtatgatggcctatttgatatttataatctcaat
tcaagcctgagatgcagcactgtctattctttgaacaactaactgagaaa
cactcacaatacagtgtcaaaatcacgtaattacttttccagtaagagac
accatgagctattttttgaatctctctccttaactttcacattgtgaagg
tataaaatcactattgatatccagaaaacactgtattttaatttttttgc
atcctctaatctactatcttttgttgatactcatatccactcaccttctt
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104461737_104462854
seq2: B6Ng01-283P12.b_44_1152 (reverse)

seq1  TATATAAATG-TATTAAAGTATCAAAGAAATTTAATTAATAAAACATGTA  49
      |||||||||| |||||| ||||| ||||||||||||||   |||||||||
seq2  TATATAAATGTTATTAAGGTATC-AAGAAATTTAATTA--TAAACATGTA  47

seq1  CGTATGACCATGCAAAAAAACTTTCTTGCTGAAAATTAATAGAAAAAGTT  99
      ||||||| ||||| ||||||||||| ||||||||  | |||||||||  |
seq2  CGTATGA-CATGCCAAAAAACTTTCCTGCTGAAA--TTATAGAAAAAAGT  94

seq1  TTCTTTCTCCAACCCCATAAGATCTTACTGCTCAAACATAAATATGATTA  149
      |||||||| ||||||||||||||| |||||||| ||||||||||||||||
seq2  TTCTTTCT-CAACCCCATAAGATC-TACTGCTC-AACATAAATATGATTA  141

seq1  ATATTAAACATACATGAGATTTAAAATACAAAAATGGATACAGCAATATA  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATT-AACATACATGAGATTTAAAATACAAAAATGGATACAGCAATATA  190

seq1  TTTGTTCACATGTATACATTTTCAGTATTCAAGATTAATAATGGTATTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCACATGTATACATTTTCAGTATTCAAGATTAATAATGGTATTTA  240

seq1  GAGATTATCCACATGTACAATCATATCTGAAAGAGACAATAGGTAATTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTATCCACATGTACAATCATATCTGAAAGAGACAATAGGTAATTTG  290

seq1  AGATATTTCTATTAAATGTAATAATAGCTTCCTCAAAGGGTCCTTTCTCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTCTATTAAATGTAATAATAGCTTCCTCAAAGGGTCCTTTCTCC  340

seq1  CAAATCACATCTTTTTTTTTAATGATTTTTCTAGTTAGATTCTAGTTAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACATCTTTTTTTTTAATGATTTTTCTAGTTAGATTCTAGTTAAT  390

seq1  GATTCATCTGTAGTTTTTCTTATCTAACAAATAAGTAAATAATTTCTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATCTGTAGTTTTTCTTATCTAACAAATAAGTAAATAATTTCTTCT  440

seq1  CTCTCTTCTCTCTCTTCTCTCTCTCTCTCTCTCAATCTCTCTCATTTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCTCTCTCTTCTCTCTCTCTCTCTCTCAATCTCTCTCATTTTTT  490

seq1  ATTTCTTTGTTTGTTTTTTGGTTTTTTGGTTTTTTTGTTTTTGTTTTTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTGTTTGTTTTTTGGTTTTTTGGTTTTTTTGTTTTTGTTTTTGT  540

seq1  TTTTGCTTTTGTTTTTGCAGAATTGAAAGTGTCCCTGCATTTGGTCTTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTTGTTTTTGCAGAATTGAAAGTGTCCCTGCATTTGGTCTTAA  590

seq1  AGGTCTTTCAGCTGATTACTGGGACTCAGATCCAACACAAAGTATTCATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTTCAGCTGATTACTGGGACTCAGATCCAACACAAAGTATTCATC  640

seq1  CCCTGTTCCGAACGATGTTTTTATCCAACTGAAGTCTGCAGAGTTCCTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCCGAACGATGTTTTTATCCAACTGAAGTCTGCAGAGTTCCTGC  690

seq1  CTCTCCCATAATCACATTTTAAAACACTGATCAAATCCTACACAGAAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCATAATCACATTTTAAAACACTGATCAAATCCTACACAGAAAAT  740

seq1  TGTCTTTCCTAATGAATGTCTGAAGCCTGAGCATGAGATAAGATAGTAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCCTAATGAATGTCTGAAGCCTGAGCATGAGATAAGATAGTAGA  790

seq1  CTATGCCACAATCTGTCCAATTTCTCTGCAGAAATCATCACCACATGACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCACAATCTGTCCAATTTCTCTGCAGAAATCATCACCACATGACC  840

seq1  AATGACCACCACTAATTGAAATATGGTTTCAATTCTCCCTTTGACAGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCACCACTAATTGAAATATGGTTTCAATTCTCCCTTTGACAGATG  890

seq1  GTCTAGCCTGTACTCCCAAGAGATAGGCTTTCCTCTGCCAACGTTTTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGCCTGTACTCCCAAGAGATAGGCTTTCCTCTGCCAACGTTTTTCC  940

seq1  TTTAAATGTGCTGGTTCAAAAGTTAACAACTGCATGGCCCCATTGATGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGTGCTGGTTCAAAAGTTAACAACTGCATGGCCCCATTGATGTT  990

seq1  CTTGTAAAGTACCACATCTGCTTTCATACTGAGTTTGTGTTTTCCTACAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAAAGTACCACATCTGCTTTCATACTGAGTTTGTGTTTTCCTACAA  1040

seq1  ATTATTTATATAATACTTTCTACCAAGGCATGTATACCTTTGCAAGAAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTATATAATACTTTCTACCAAGGCATGTATACCTTTGCAAGAAAG  1090

seq1  TACCTTCATCTAGGAATTC  1118
      |||||||||||||||||||
seq2  TACCTTCATCTAGGAATTC  1109

seq1: chr10_104337646_104338701
seq2: B6Ng01-283P12.g_63_1113

seq1  GAATTCTTAGAGTCATGTATGAATCCTTTTATATCAACTGCAAATGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGAGTCATGTATGAATCCTTTTATATCAACTGCAAATGGAGT  50

seq1  TATTTTGCCTTCTTCCCTTATCTTTGATTCCAATTTGTATCCCTTTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCCTTCTTCCCTTATCTTTGATTCCAATTTGTATCCCTTTGTTA  100

seq1  TCCCTCAGATATCTTATTGTTCTAGTTAAGACTTCAAGAACTATATTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGATATCTTATTGTTCTAGTTAAGACTTCAAGAACTATATTGAA  150

seq1  TAGGTACAGAACGAATGGACAGCCTTGTCTTGTTCCTGATTTTAATGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACAGAACGAATGGACAGCCTTGTCTTGTTCCTGATTTTAATGGAA  200

seq1  TTGCTTTTAGTTTCTCTCAAATTAACATGATGTTGTTATAGGTTTGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTAGTTTCTCTCAAATTAACATGATGTTGTTATAGGTTTGTTGT  250

seq1  AAGCTGCCTTTATTATGTTTTTTTTTTTCCTGAAGAGGACGTAGATTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCTTTATTATGTTTTTTTTTTTCCTGAAGAGGACGTAGATTCAA  300

seq1  TTCCTAGTAACCACATGGTGATTTATAACCATCACTAACTCCAGTTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGTAACCACATGGTGATTTATAACCATCACTAACTCCAGTTTCAA  350

seq1  AAACTGTGATACTCTTTTGTGACTTCCACAGTCATCAAGCACATACATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGATACTCTTTTGTGACTTCCACAGTCATCAAGCACATACATGA  400

seq1  TGCATATATATACATTCCATCGAATCACTCACAAAATTAGTAAATCTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATATATACATTCCATCGAATCACTCACAAAATTAGTAAATCTAAT  450

seq1  AAAATGTTTAAAAATATTCAAGATTTTCCATTACAATTTAAATGCATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTTAAAAATATTCAAGATTTTCCATTACAATTTAAATGCATCAT  500

seq1  TTCTTTTAATTGTTTTATCCTGTCCATCTTCTTCCTGGATTCCTAGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAATTGTTTTATCCTGTCCATCTTCTTCCTGGATTCCTAGTGCT  550

seq1  AGATGCAACTGTATAAAACAGTGATACTTTATCAGAAATCAATCATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAACTGTATAAAACAGTGATACTTTATCAGAAATCAATCATGTTA  600

seq1  TTTTCATATATTATGCACAATATAGGCCTTAAAATACTAGTGAAGAGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATATTATGCACAATATAGGCCTTAAAATACTAGTGAAGAGGGG  650

seq1  ATGTTCCTCCCCTCTTGTCTGTCTCCTCAGAGATGTGGTAACACAGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCTCCCCTCTTGTCTGTCTCCTCAGAGATGTGGTAACACAGCAGC  700

seq1  TCTTCCTGATATGCTATTATTTAAAAACTGCTCTTGTCCCAGAACTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTGATATGCTATTATTTAAAAACTGCTCTTGTCCCAGAACTCCAA  750

seq1  GAATATTAGATTTAGAGTATGATGGCCTATTTGATATTTATAATCTCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTAGATTTAGAGTATGATGGCCTATTTGATATTTATAATCTCAAT  800

seq1  TCAAGCCTGAGATGCAGCACTGTCTATTCTTTGAACAACTAACTGAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTGAGATGCAGCACTGTCTATTCTTTGAACAACTAACTGAGAAA  850

seq1  CACTCACAATACAGTGTCAAAATCACGTAATTACTTTTCCAGTAAGAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACAATACAGTGTCAAAATCACGTAATTACTTTTCCAGTAAGAGAC  900

seq1  ACCATGAGCTA-TTTTTGAATCTCTCTCCTTAACTTTCACATTGTGAAGG  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACCATGAGCTATTTTTTGAATCTCTCTCCTTAACTTTCACATTGTGAAGG  950

seq1  TATAAAATCACTATTGATATCCAGAAAACACTGTATTTTAATTTTTTTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATCACTATTGATATCCAGAAAACACTGTATTTTAATTTTTTTGC  1000

seq1  ATTCCTCTTAATTCTACTAATCTTTTGTTTTGATACTCAATAT-CACTCA  1048
      | ||||||  | |||||| ||||||||  ||||||||| |||| ||||||
seq2  A-TCCTCT--AATCTACT-ATCTTTTG--TTGATACTC-ATATCCACTCA  1043

seq1  CCTTCTTT  1056
      ||||||||
seq2  CCTTCTTT  1051