BAC Information

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BAC

Clone NameB6Ng01-284P16
Chromosome10 (Build37)
Map Location 54,935,100 - 55,020,351
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041898, LOC382460
Downstream geneLOC100041927, D630037F22Rik, 1700060H10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284P16.bB6Ng01-284P16.g
ACCGA083545GA083546
length1,0971,007
definitionB6Ng01-284P16.b B6Ng01-284P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,019,251 - 55,020,351)(54,935,100 - 54,936,105)
sequence
gaattccatggtgtgctaattgcatctcagcaaagctccattaagatgaa
ggaaagtgaatgttgtgacactgagtttctgtttcagtatttttccttct
cctaaacttgctgaggtctcccaaatataacagatgattattcccttctt
tcagctggctttccacacatcgacagatgccacggcaacttctgactgca
ccgagtgaacagactagaatgaattcaacattgagaccgaccggtaaagc
cagctgctcagtacatgagatcctgagattgcttgtatgtctaggcactt
ctgttcacacctgttcagctggcccaggcttagtgatctcttttcaaggc
ccacagagatagttttgttttgttatgccaactttccccctttctgctat
gtcttccttcacttgttctttaagtcaaacactatctgtttcagagctcc
agaaacgtattcaacctattttcagttgtgatgtcccctatttcaataat
ataaccccttttccccactgttatgatatatgaagttggagtatgaggca
gtgcattgtggaggtgggatttttcatgatatacatggtatttgataata
tataaaatatttgataatatataaaaagataatacaaatcagtagcattt
taaaatgtagagaatgagccactggtgaactaaaggaaaagcaagcacac
ttaaattgtctttgaaaaaaaatcagggaaaacagtggtaaattgtgtca
aatgctgttgtatcaataaaagttcatttacttaaagcttgcaactcgat
ggcttttagtatattcagcacctgtaatttcatgtggggttgggaataag
tgactgaccaattctactttttttgaaatttaactgaagtttaaggtcac
tatcactattctggccaaggcaaacaactagtagctctattaccaatccc
ctcttctgtagccacattggaaatgatggtgatttgttcattttgaaaat
aattttgactccctagcactgaaagagtgacactactcatctctgatcat
gcgtttcaaaacagcacagtgggaatttcactaactaggaaggaaag

gaattcttttctataggtcttcccttctatagtatgggacttatagctgc
tcaggctctattctcaagacatgttttgttagttcattggattctccaat
ttgtttaggagtttgaggcaagctaaccactgagtgtatcctaagattac
caatctgctcattctgtacagaacaagatgatattctctccaatcagaaa
aaaaaattctgcttgcacacattagaaattagaaaggaaacgtatgtctt
gcagaaagtagagtagaacttatcagtagaagggccaacatttggaggtc
agaaatagatttgattgcttcaaagccatgaagacaaagataagaggaat
ctagaacagcatcagtcaatgagcaatgccttcttgaagcatagttgtcc
ttccagtttcttcactttctcttgtcttattaggacttcgttttattaag
ctttcacttgtctaatataaatttatcatttcataatattttattggtaa
aagttaaatgtaaatgccaattttattttctccagtggtaggatgagatg
acagctgtaaccatgctgtggaatacacagtttgggcttgaacccaaagg
atttctttctctgttctgtctctaagcctaggcctggaagcttctcactt
acatacaatctaatcttctatggtgactggttcaatctggcttctttcaa
tttctgactgaatagttctacatggcctcaaactaactgtagcaatatgg
tctaattttctggctcattctcatactctgactgtttctgccttcacctc
tgtctagcttgttctctctcaaacctgttatcataaaactgtcctggtaa
atttgccatatgtaagccatgccaccacctaccctttctttctcaatgtt
cctaaatagcctttctttcctgtgctgttctcatgtgagttgggcatata
ctgtctctggctcattttgtcaaatctttctctgattcatcacattgtat
gcctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_55019251_55020351
seq2: B6Ng01-284P16.b_45_1141 (reverse)

seq1  CTTTCCTT--AAGTAAGTGAAA-TCCCACTGTGCTGTTTTGAAACGCATG  47
      ||||||||   ||| ||||||| |||||||||||||||||||||||||||
seq2  CTTTCCTTCCTAGTTAGTGAAATTCCCACTGTGCTGTTTTGAAACGCATG  50

seq1  ACCCAGAGATGAGTAGGTGTTCACTCTTTCAGTGGCCTAGGGAGTCAAAA  97
      |  |||||||||||| ||| ||||||||||||||  ||||||||||||||
seq2  A-TCAGAGATGAGTA-GTG-TCACTCTTTCAGTG--CTAGGGAGTCAAAA  95

seq1  TTATTTTCAAAATTGGACAAATCACCATCATTTCCAATGTTGGCTACAGA  147
      |||||||||||| || ||||||||||||||||||||||| ||||||||||
seq2  TTATTTTCAAAA-TGAACAAATCACCATCATTTCCAATG-TGGCTACAGA  143

seq1  AGAGGGGATTGGTAATAGAGCTACTAGTTGTTTGCCTTGGCCAGAATAGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGGATTGGTAATAGAGCTACTAGTTGTTTGCCTTGGCCAGAATAGT  193

seq1  GATAGTGACCTTAAACTTCAGTTAAATTTCAAAAAAAGTAGAATTGGTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGACCTTAAACTTCAGTTAAATTTCAAAAAAAGTAGAATTGGTCA  243

seq1  GTCACTTATTCCCAACCCCACATGAAATTACAGGTGCTGAATATACTAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTATTCCCAACCCCACATGAAATTACAGGTGCTGAATATACTAAA  293

seq1  AGCCATCGAGTTGCAAGCTTTAAGTAAATGAACTTTTATTGATACAACAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCGAGTTGCAAGCTTTAAGTAAATGAACTTTTATTGATACAACAG  343

seq1  CATTTGACACAATTTACCACTGTTTTCCCTGATTTTTTTTCAAAGACAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACACAATTTACCACTGTTTTCCCTGATTTTTTTTCAAAGACAAT  393

seq1  TTAAGTGTGCTTGCTTTTCCTTTAGTTCACCAGTGGCTCATTCTCTACAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTGCTTGCTTTTCCTTTAGTTCACCAGTGGCTCATTCTCTACAT  443

seq1  TTTAAAATGCTACTGATTTGTATTATCTTTTTATATATTATCAAATATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATGCTACTGATTTGTATTATCTTTTTATATATTATCAAATATTT  493

seq1  TATATATTATCAAATACCATGTATATCATGAAAAATCCCACCTCCACAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTATCAAATACCATGTATATCATGAAAAATCCCACCTCCACAAT  543

seq1  GCACTGCCTCATACTCCAACTTCATATATCATAACAGTGGGGAAAAGGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCCTCATACTCCAACTTCATATATCATAACAGTGGGGAAAAGGGG  593

seq1  TTATATTATTGAAATAGGGGACATCACAACTGAAAATAGGTTGAATACGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTATTGAAATAGGGGACATCACAACTGAAAATAGGTTGAATACGT  643

seq1  TTCTGGAGCTCTGAAACAGATAGTGTTTGACTTAAAGAACAAGTGAAGGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGCTCTGAAACAGATAGTGTTTGACTTAAAGAACAAGTGAAGGA  693

seq1  AGACATAGCAGAAAGGGGGAAAGTTGGCATAACAAAACAAAACTATCTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAGCAGAAAGGGGGAAAGTTGGCATAACAAAACAAAACTATCTCT  743

seq1  GTGGGCCTTGAAAAGAGATCACTAAGCCTGGGCCAGCTGAACAGGTGTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCTTGAAAAGAGATCACTAAGCCTGGGCCAGCTGAACAGGTGTGA  793

seq1  ACAGAAGTGCCTAGACATACAAGCAATCTCAGGATCTCATGTACTGAGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTGCCTAGACATACAAGCAATCTCAGGATCTCATGTACTGAGCA  843

seq1  GCTGGCTTTACCGGTCGGTCTCAATGTTGAATTCATTCTAGTCTGTTCAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTTTACCGGTCGGTCTCAATGTTGAATTCATTCTAGTCTGTTCAC  893

seq1  TCGGTGCAGTCAGAAGTTGCCGTGGCATCTGTCGATGTGTGGAAAGCCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGCAGTCAGAAGTTGCCGTGGCATCTGTCGATGTGTGGAAAGCCAG  943

seq1  CTGAAAGAAGGGAATAATCATCTGTTATATTTGGGAGACCTCAGCAAGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGAAGGGAATAATCATCTGTTATATTTGGGAGACCTCAGCAAGTT  993

seq1  TAGGAGAAGGAAAAATACTGAAACAGAAACTCAGTGTCACAACATTCACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAGGAAAAATACTGAAACAGAAACTCAGTGTCACAACATTCACT  1043

seq1  TTCCTTCATCTTAATGGAGCTTTGCTGAGATGCAATTAGCACACCATGGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCATCTTAATGGAGCTTTGCTGAGATGCAATTAGCACACCATGGA  1093

seq1  ATTC  1101
      ||||
seq2  ATTC  1097


seq1: chr10_54935100_54936105
seq2: B6Ng01-284P16.g_65_1071

seq1  GAATTCTTTTCTATAGGTCTTCCCTTCTATAGTATGGGACTTATAGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTATAGGTCTTCCCTTCTATAGTATGGGACTTATAGCTGC  50

seq1  TCAGGCTCTATTCTCAAGACATGTTTTGTTAGTTCATTGGATTCTCCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTCTATTCTCAAGACATGTTTTGTTAGTTCATTGGATTCTCCAAT  100

seq1  TTGTTTAGGAGTTTGAGGCAAGCTAACCACTGAGTGTATCCTAAGATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAGGAGTTTGAGGCAAGCTAACCACTGAGTGTATCCTAAGATTAC  150

seq1  CAATCTGCTCATTCTGTACAGAACAAGATGATATTCTCTCCAATCAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGCTCATTCTGTACAGAACAAGATGATATTCTCTCCAATCAGAAA  200

seq1  AAAAAATTCTGCTTGCACACATTAGAAATTAGAAAGGAAACGTATGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTCTGCTTGCACACATTAGAAATTAGAAAGGAAACGTATGTCTT  250

seq1  GCAGAAAGTAGAGTAGAACTTATCAGTAGAAGGGCCAACATTTGGAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGTAGAGTAGAACTTATCAGTAGAAGGGCCAACATTTGGAGGTC  300

seq1  AGAAATAGATTTGATTGCTTCAAAGCCATGAAGACAAAGATAAGAGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGATTTGATTGCTTCAAAGCCATGAAGACAAAGATAAGAGGAAT  350

seq1  CTAGAACAGCATCAGTCAATGAGCAATGCCTTCTTGAAGCATAGTTGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACAGCATCAGTCAATGAGCAATGCCTTCTTGAAGCATAGTTGTCC  400

seq1  TTCCAGTTTCTTCACTTTCTCTTGTCTTATTAGGACTTCGTTTTATTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTTCTTCACTTTCTCTTGTCTTATTAGGACTTCGTTTTATTAAG  450

seq1  CTTTCACTTGTCTAATATAAATTTATCATTTCATAATATTTTATTGGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACTTGTCTAATATAAATTTATCATTTCATAATATTTTATTGGTAA  500

seq1  AAGTTAAATGTAAATGCCAATTTTATTTTCTCCAGTGGTAGGATGAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAATGTAAATGCCAATTTTATTTTCTCCAGTGGTAGGATGAGATG  550

seq1  ACAGCTGTAACCATGCTGTGGAATACACAGTTTGGGCTTGAACCCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTAACCATGCTGTGGAATACACAGTTTGGGCTTGAACCCAAAGG  600

seq1  ATTTCTTTCTCTGTTCTGTCTCTAAGCCTAGGCCTGGAAGCTTCTCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCTCTGTTCTGTCTCTAAGCCTAGGCCTGGAAGCTTCTCACTT  650

seq1  ACATACAATCTAATCTTCTATGGTGACTGGTTCAATCTGGCTTCTTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAATCTAATCTTCTATGGTGACTGGTTCAATCTGGCTTCTTTCAA  700

seq1  TTTCTGACTGAATAGTTCTACATGGCCTCAAACTAACTGTAGCAATATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACTGAATAGTTCTACATGGCCTCAAACTAACTGTAGCAATATGG  750

seq1  TCTAATTTTCTGGCTCATTCTCATACTCTGACTGTTTCTGCCTTCACCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTTCTGGCTCATTCTCATACTCTGACTGTTTCTGCCTTCACCTC  800

seq1  TGTCTAGCTTGTTCTCTCTCAAACCTGTTATCATAAAACTGTCCTGGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGCTTGTTCTCTCTCAAACCTGTTATCATAAAACTGTCCTGGTAA  850

seq1  AATTGCCATATGTAAGCCATGCCACCACCTA-CCTTTCTTTCTCAATGTT  899
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTGCCATATGTAAGCCATGCCACCACCTACCCTTTCTTTCTCAATGTT  900

seq1  CCTAAATAGCCTTTCTTTCCTGTGCTGTTCTCATGTGAGTTGGGCATATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATAGCCTTTCTTTCCTGTGCTGTTCTCATGTGAGTTGGGCATATA  950

seq1  CTGTCTCTGGCTCATTTTGTCAAATCTTTCTCTGATTCATCACATTGTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGGCTCATTTTGTCAAATCTTTCTCTGATTCATCACATTGTAT  1000

seq1  GCCTCTC  1006
      |||||||
seq2  GCCTCTC  1007


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