BAC Information

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BAC

Clone NameB6Ng01-285C20
Chromosome10 (Build37)
Map Location 50,132,171 - 50,132,827
singlet/doubletsinglet
Overlap genenone
Upstream geneGrik2
Downstream geneLOC629652, Ascc3, Sim1, LOC268300
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285C20.bB6Ng01-285C20.g
ACCGA083692GA083693
length1,196966
definitionB6Ng01-285C20.b B6Ng01-285C20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttccccatttctgctgaagcagttgcctccacctctgtctct
gcctcctgcattgagtctggttgggctgggcctatgagaagccaactagc
cagtgaggattgcaccagagcctcaggacagcacttcggaagagcagatc
tcttcccaagtgttacagctattaggacaaaagactcagatgacagagta
gttcttgcacacattttattccctggataggacttatatacaactttgag
gattattcagagtttgacagcagttacttctcattggcgtggactgaggg
tttggggaaaccttactggcatgtgggagggcttgctgcagctactacat
gactgatgctgcatacctccctgcaaggggagggggctgtggaaggctgt
agctatgtaacaggagccaggtgcccaggaggcatggccgaactccttct
gtcccatggaaatcaccacacactggggctctggggttccaaacctttgc
ttgaccagggatcaggctgtctgtgtacagcccaccatcctacactatat
gacaaaaacttcaagtctttcaaaaaataaatcaaagaagacctcagaaa
attgacaggtctcccatgattatgtattgatagaattatcatagtaaagg
gggccattctaccaaaagcaatctacagattcaacacgatccccatcaaa
atcccaagataattattcaaagatatgcaaagggcaattcccaaattcat
ctggaaaaacaagaaacccagaaaagctaagacaattttttttatttaaa
tattgtttttattacatattttcctcaattacatttccaatgctatccca
aaagtcccccatacacttcacccaccaccactccctacacacccactcct
acttcttgggcctggcgttcccatgtactggggcatatgaactttgcatg
tccaatggacctctctttccagtgatgggccgactaggtcatctttttga
taacatatgcagctagagtcaagagctccagggtactggttagttcataa
tgttgttacactaacaggtttgcagatctctttaactccttgaatacttt
tctctagctctcaattgggggaccttgtgatccattccaaatagcctgga
cctgtggagcacccacctttctgggtggaatttggcacagggcatc
gaattctccactaaacccatctgctcctgggctttttttttttttttttt
ggttgggagactattaatgacttgttctatttctttaggggttataggac
tgtataatgacatttaatacaagtattaagtgtattaaaagtattaaatt
taatgcaagtattaaatgtactttgagcatgtttctccttgtttgcttct
tcctcccctctccccttcagttctattaagtacgtttgtttctatttttc
atatatgcataaacattatttttgtatatctataaaatgtgggagccaca
aatgagagaacatgtggtgtatttgtctttctgaggctgactcatctcaa
ttactatgatcatgtctaattgcatacatttcctgcaaacaatatgactt
tgctcttttgtatgggtgaaaaaagaatctcattatgattgggtttatcc
actgatctattcacagattcttactttggttacccaagttagctactggg
aaccttccttgtatgcaaatatctctgtggaatggtgacttgaagtcctt
tatgtgaatagccaggagggttgtaactggaccacatagtagattgagtt
tcaggtttttgagagatcttcacactgatttttatagtgccttgactagt
ttgccttctctttagaagcatatgaggtggattcccttttgttgcatcct
tgtcagcatttactgttgtttgttttttgaatggctcatattttgattaa
ggtgggatggaatctcaatgttgttataatttgaatttcagtataagggc
aggttactaatttttgtatgttaattatatgtcttgtaacttttcttaga
gtatttattagatctagcaatttttcatggactctctaggggtttcttaa
tataaaatattatcatctccaaatgaagaaactgacttttttctttttgt
tcctttgtatggtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_50132171_50132827
seq2: B6Ng01-285C20.g_67_723 (reverse)

seq1  AAGGCAAACTAGTCAAGGCACTATAAAAATCAGTGTGAAGATCTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAACTAGTCAAGGCACTATAAAAATCAGTGTGAAGATCTCTCAAA  50

seq1  AACCTGAAACTCAATCTACTATGTGGTCCAGTTACAACCCTCCTGGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAAACTCAATCTACTATGTGGTCCAGTTACAACCCTCCTGGCTAT  100

seq1  TCACATAAAGGACTTCAAGTCACCATTCCACAGAGATATTTGCATACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAAAGGACTTCAAGTCACCATTCCACAGAGATATTTGCATACAAG  150

seq1  GAAGGTTCCCAGTAGCTAACTTGGGTAACCAAAGTAAGAATCTGTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTCCCAGTAGCTAACTTGGGTAACCAAAGTAAGAATCTGTGAATA  200

seq1  GATCAGTGGATAAACCCAATCATAATGAGATTCTTTTTTCACCCATACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTGGATAAACCCAATCATAATGAGATTCTTTTTTCACCCATACAA  250

seq1  AAGAGCAAAGTCATATTGTTTGCAGGAAATGTATGCAATTAGACATGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAAAGTCATATTGTTTGCAGGAAATGTATGCAATTAGACATGATC  300

seq1  ATAGTAATTGAGATGAGTCAGCCTCAGAAAGACAAATACACCACATGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAATTGAGATGAGTCAGCCTCAGAAAGACAAATACACCACATGTTC  350

seq1  TCTCATTTGTGGCTCCCACATTTTATAGATATACAAAAATAATGTTTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTGTGGCTCCCACATTTTATAGATATACAAAAATAATGTTTATG  400

seq1  CATATATGAAAAATAGAAACAAACGTACTTAATAGAACTGAAGGGGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGAAAAATAGAAACAAACGTACTTAATAGAACTGAAGGGGAGAG  450

seq1  GGGAGGAAGAAGCAAACAAGGAGAAACATGCTCAAAGTACATTTAATACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAGAAGCAAACAAGGAGAAACATGCTCAAAGTACATTTAATACT  500

seq1  TGCATTAAATTTAATACTTTTAATACACTTAATACTTGTATTAAATGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAAATTTAATACTTTTAATACACTTAATACTTGTATTAAATGTCA  550

seq1  TTATACAGTCCTATAACCCCTAAAGAAATAGAACAAGTCATTAATAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAGTCCTATAACCCCTAAAGAAATAGAACAAGTCATTAATAGTCT  600

seq1  CCCAACCAAAAAAAAAAAAAAAAAAGCCCAGGAGCAGATGGGTTTAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCAAAAAAAAAAAAAAAAAAGCCCAGGAGCAGATGGGTTTAGTGG  650

seq1  AGAATTC  657
      |||||||
seq2  AGAATTC  657