BAC Information

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BAC

Clone NameB6Ng01-287E17
Chromosome10 (Build37)
Map Location 16,292,061 - 16,419,997
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439, LOC382457
Downstream geneLOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287E17.bB6Ng01-287E17.g
ACCGA085259GA085260
length1,1731,077
definitionB6Ng01-287E17.b B6Ng01-287E17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,418,822 - 16,419,997)(16,292,061 - 16,292,930)
sequence
gaattccctatctgcccttctctgatgtggtgatgaggataatgatagtg
aagataccccttttttgtttgtttgtttgttttgtttttttcctgattct
tactggcatgccagtttctctatggcatcgtccagagtctactactctaa
tccatgattcatttctctctaagtttgtcttttctattcagtggattcat
agccctttggtccatcttgcaaaaaacaaacaacaaacaaaaaactttat
tttaagaactaaaacttgtgaaggctagttttttgtttgttttttgtttg
tttgtttgtttgtttgtttttagaaagtgctttatacagaaccaaagaca
catacaacacaaaataatttttaaaacaaatataaaagaatacattttct
tcctgcctgcccccaactccatgaaacagaaaaataaaaataagaaaact
ttaaaccaaaagggagagttgggattttagtttcaggtcattctatgcac
aatatggggctaacatgcatggagaaggggtctatgctgctcccgtagag
taccctagagttaacattttcttttgaagtcagctaagagtatctcacac
agaagtccttagcatgtgtgtcaaccatgactttggccatcagttagcca
aggagttacagactaagctagcacttgccttttagttgcttttgtgtata
tcatctgttctgatgctcaggcaaaaaggcaacgacacaaatacacacac
actcaaaggtaagcaatctttatttacaattatgtcaaggttctccaata
aaaaattaaaatctccattaaagtcacaattaaagttaagtatatttcct
tcccatctcatgcatcaatgaagtaacctctattcaaagcattagaaatt
ctcacgagctgctcagtttctacttatgaaagaacatttcagtgagacaa
aataaggagaagttaatttatgaagttgtttacatgatttgttaaggacc
tcagaaacaaaagtaatattctgaagaattttaaatcaaattcttaactt
gtgctatcttttttaagatatttatttgaattgtatgctcctcctctaac
tgggagcttgaggtagtggaataaatgaagccacatgggcctgtggattg
ctagaccatgtgttggactactg

gaattctgattggatgaggtggggtggagctagaaggagatgagtaggtg
tgagtagtgaggagtttttctttttagctcttgccgtgagtagaagctag
tggtagtaagagaaactgttgtaagagagagttgtaagtaaagctgcaag
aaagaaggaaggaatagaagaagaggctgctggggaagagagctgtaagg
aaaaaagcctgaagacattgtttcgtgaacccgacttggtgtctgtgtca
ttcatgtcaccactggcttgaaggaccaacaacaatgtttttctgtaatt
ctttaagggatttatgtgtttcctttttaagggcttctacatgtttacct
gtgatctcctgtattactttaggagagctatttatgtcgcccttaaggtc
ctctatcaacttcatgagatgagattttagatcagaatcttgcttttcag
gtgtgttaggttatcctgggtttgctgaggtgggataactagtttctgat
gttgccaagtttcttttgctaatgttcttgaacttgcctttttggtatta
tctctggtgttaactggtcttgctgtctctcctatgagcctggttatgtg
gacttccttgggtcaggctgtctctgggtgtgggagggggtctgaagtgc
ttgatctgtgagcctggctatgacatacctactgggagtcaagctgactc
tgtgtatgggcaggatgggggttgatggagcacacaatccaactgggtgc
aattgagaactggaaggaagattgatatcaaagatttaaatacacaaaga
acctgaagtatctgaatggcagaagaatcttgcatataattctgttcccc
aagaaatcatattaaatatcaattatattatcaaagcttttaatagaaaa
tgacaaatttattacagaatttatggtgaaaagcaaatgaccaaaaagaa
gaaaaatagcttgaaataagattagaaagaacatgttatttcaaagtgag
acttttatgtaatactattgaaaatgctatctgggttaaaattattttaa
ttttttccatatattgaaagctatcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16418822_16419997
seq2: B6Ng01-287E17.b_45_1217 (reverse)

seq1  CAGTAGTCAAACACATGGTCTAGCCATACCACA-GCCCATGTGGCTTCAT  49
      |||||||| ||||||||||||||| || ||||| ||||||||||||||| 
seq2  CAGTAGTCCAACACATGGTCTAGCAAT-CCACAGGCCCATGTGGCTTCA-  48

seq1  TTTATTCCACTTACCTCAAGCTCCCAGTTTAGAGGAGGAAGCATACAA-T  98
      |||||||||| |||||||||||||||| |||||||||| ||||||||| |
seq2  TTTATTCCAC-TACCTCAAGCTCCCAG-TTAGAGGAGG-AGCATACAATT  95

seq1  CAAATAAATA-CTTTAAAAAGATAGCACAAGTTAAGAATTTGATTTAAAA  147
      |||||||||| ||| |||||||||||||||||||||||||||||||||||
seq2  CAAATAAATATCTTAAAAAAGATAGCACAAGTTAAGAATTTGATTTAAAA  145

seq1  TTCTTCAGAATA-TACTTTTG-TTCTGAGTTCCTT-ACAAATCATGTAAA  194
      |||||||||||| |||||||| ||||||| ||||| ||||||||||||||
seq2  TTCTTCAGAATATTACTTTTGTTTCTGAGGTCCTTAACAAATCATGTAAA  195

seq1  CAACTTCAATAAATTAACTTCTCCTTATTTTTGTCTTCACTGAAATGTTT  244
      ||||||| ||||||||||||||||||| ||||||| ||||||||||| ||
seq2  CAACTTC-ATAAATTAACTTCTCCTTA-TTTTGTC-TCACTGAAATG-TT  241

seq1  CTTTCATAAGTAGAAACTGAGCAGCTCGTGAGAATTTCTAATGCTTTGAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATAAGTAGAAACTGAGCAGCTCGTGAGAATTTCTAATGCTTTGAA  291

seq1  TAGAGGTTACTTCATTGATGCATGAGATGGGAAGGAAATATACTTAACTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTTACTTCATTGATGCATGAGATGGGAAGGAAATATACTTAACTT  341

seq1  TAATTGTGACTTTAATGGAGATTTTAATTTTTTATTGGAGAACCTTGACA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTGACTTTAATGGAGATTTTAATTTTTTATTGGAGAACCTTGACA  391

seq1  TAATTGTAAATAAAGATTGCTTACCTTTGAGTGTGTGTGTATTTGTGTCG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTAAATAAAGATTGCTTACCTTTGAGTGTGTGTGTATTTGTGTCG  441

seq1  TTGCCTTTTTGCCTGAGCATCAGAACAGATGATATACACAAAAGCAACTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTTTGCCTGAGCATCAGAACAGATGATATACACAAAAGCAACTA  491

seq1  AAAGGCAAGTGCTAGCTTAGTCTGTAACTCCTTGGCTAACTGATGGCCAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAGTGCTAGCTTAGTCTGTAACTCCTTGGCTAACTGATGGCCAA  541

seq1  AGTCATGGTTGACACACATGCTAAGGACTTCTGTGTGAGATACTCTTAGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGTTGACACACATGCTAAGGACTTCTGTGTGAGATACTCTTAGC  591

seq1  TGACTTCAAAAGAAAATGTTAACTCTAGGGTACTCTACGGGAGCAGCATA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCAAAAGAAAATGTTAACTCTAGGGTACTCTACGGGAGCAGCATA  641

seq1  GACCCCTTCTCCATGCATGTTAGCCCCATATTGTGCATAGAATGACCTGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTTCTCCATGCATGTTAGCCCCATATTGTGCATAGAATGACCTGA  691

seq1  AACTAAAATCCCAACTCTCCCTTTTGGTTTAAAGTTTTCTTATTTTTATT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAATCCCAACTCTCCCTTTTGGTTTAAAGTTTTCTTATTTTTATT  741

seq1  TTTCTGTTTCATGGAGTTGGGGGCAGGCAGGAAGAAAATGTATTCTTTTA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTCATGGAGTTGGGGGCAGGCAGGAAGAAAATGTATTCTTTTA  791

seq1  TATTTGTTTTAAAAATTATTTTGTGTTGTATGTGTCTTTGGTTCTGTATA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTTAAAAATTATTTTGTGTTGTATGTGTCTTTGGTTCTGTATA  841

seq1  AAGCACTTTCTAAAAACAAACAAACAAACAAACAAACAAAAAACAAACAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTTCTAAAAACAAACAAACAAACAAACAAACAAAAAACAAACAA  891

seq1  AAAACTAGCCTTCACAAGTTTTAGTTCTTAAAATAAAGTTTTTTGTTTGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAGCCTTCACAAGTTTTAGTTCTTAAAATAAAGTTTTTTGTTTGT  941

seq1  TGTTTGTTTTTTGCAAGATGGACCAAAGGGCTATGAATCCACTGAATAGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTTTTGCAAGATGGACCAAAGGGCTATGAATCCACTGAATAGA  991

seq1  AAAGACAAACTTAGAGAGAAATGAATCATGGATTAGAGTAGTAGACTCTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAAACTTAGAGAGAAATGAATCATGGATTAGAGTAGTAGACTCTG  1041

seq1  GACGATGCCATAGAGAAACTGGCATGCCAGTAAGAATCAGGAAAAAAACA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGATGCCATAGAGAAACTGGCATGCCAGTAAGAATCAGGAAAAAAACA  1091

seq1  AAACAAACAAACAAACAAAAAAGGGGTATCTTCACTATCATTATCCTCAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAACAAAAAAGGGGTATCTTCACTATCATTATCCTCAT  1141

seq1  CACCACATCAGAGAAGGGCAGATAGGGAATTC  1176
      ||||||||||||||||||||||||||||||||
seq2  CACCACATCAGAGAAGGGCAGATAGGGAATTC  1173


seq1: chr10_16292061_16292930
seq2: B6Ng01-287E17.g_271_1142

seq1  AGCCTGAAGACATTGTTTCGTGAACCCGACTTGGTGTCTGTGTCATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGAAGACATTGTTTCGTGAACCCGACTTGGTGTCTGTGTCATTCAT  50

seq1  GTCACCACTGGCTTGAAGGACCAACAACAATGTTTTTCTGTAATTCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACTGGCTTGAAGGACCAACAACAATGTTTTTCTGTAATTCTTTA  100

seq1  AGGGATTTATGTGTTTCCTTTTTAAGGGCTTCTACATGTTTACCTGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTATGTGTTTCCTTTTTAAGGGCTTCTACATGTTTACCTGTGAT  150

seq1  CTCCTGTATTACTTTAGGAGAGCTATTTATGTCGCCCTTAAGGTCCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTATTACTTTAGGAGAGCTATTTATGTCGCCCTTAAGGTCCTCTA  200

seq1  TCAACTTCATGAGATGAGATTTTAGATCAGAATCTTGCTTTTCAGGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTCATGAGATGAGATTTTAGATCAGAATCTTGCTTTTCAGGTGTG  250

seq1  TTAGGTTATCCTGGGTTTGCTGAGGTGGGATAACTAGTTTCTGATGTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTATCCTGGGTTTGCTGAGGTGGGATAACTAGTTTCTGATGTTGC  300

seq1  CAAGTTTCTTTTGCTAATGTTCTTGAACTTGCCTTTTTGGTATTATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTCTTTTGCTAATGTTCTTGAACTTGCCTTTTTGGTATTATCTCT  350

seq1  GGTGTTAACTGGTCTTGCTGTCTCTCCTATGAGCCTGGTTATGTGGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTAACTGGTCTTGCTGTCTCTCCTATGAGCCTGGTTATGTGGACTT  400

seq1  CCTTGGGTCAGGCTGTCTCTGGGTGTGGGAGGGGGTCTGAAGTGCTTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGTCAGGCTGTCTCTGGGTGTGGGAGGGGGTCTGAAGTGCTTGAT  450

seq1  CTGTGAGCCTGGCTATGACATACCTACTGGGAGTCAAGCTGACTCTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCCTGGCTATGACATACCTACTGGGAGTCAAGCTGACTCTGTGT  500

seq1  ATGGGCAGGATGGGGGTTGATGGAGCACACAATCCAACTGGGTGCAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGGATGGGGGTTGATGGAGCACACAATCCAACTGGGTGCAATTG  550

seq1  AGAACTGGAAGGAAGATTGATATCAAAGATTTAAATACACAAAGAACCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGGAAGGAAGATTGATATCAAAGATTTAAATACACAAAGAACCTG  600

seq1  AAGTATCTGAATGGCAGAAGAATC-TGCATATAATTCTGTTCCCCAAG-A  648
      |||||||||||||||||||||||| ||||||||||||||||||||||| |
seq2  AAGTATCTGAATGGCAGAAGAATCTTGCATATAATTCTGTTCCCCAAGAA  650

seq1  ATCATATTAAATATCAATTATATTATCAAAGCTTTTAATAGAAAATGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATTAAATATCAATTATATTATCAAAGCTTTTAATAGAAAATGACA  700

seq1  AATTTATTACAGAAATTTAT-GTGAAAAGCAAAGGACCAAAAAGAGAAAA  747
      |||||||||||| ||||||| |||||||||||| |||||||||||  |||
seq2  AATTTATTACAG-AATTTATGGTGAAAAGCAAATGACCAAAAAGAAGAAA  749

seq1  AATAGCTTGAAAATAAGAATAGAAAGAACATG-TATTTCAAAAGTTGAGA  796
      ||||||||| |||||||| ||||||||||||| |||||||||   |||||
seq2  AATAGCTTG-AAATAAGATTAGAAAGAACATGTTATTTCAAA--GTGAGA  796

seq1  CTTTTAATGTAATACTATGAAAAATGCTATCTGGTAAAAAATTATTT--A  844
      ||||| ||||||||||||  ||||||||||||||   ||||||||||  |
seq2  CTTTT-ATGTAATACTATTGAAAATGCTATCTGGGTTAAAATTATTTTAA  845

seq1  ATTTTTCAATA-AATGAAAGCTATCAC  870
       |||||| ||| | |||||||||||||
seq2  TTTTTTCCATATATTGAAAGCTATCAC  872


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