BAC Information

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BAC

Clone NameB6Ng01-287J11
Chromosome10 (Build37)
Map Location 102,132,098 - 102,133,204
singlet/doubletsinglet
Overlap genenone
Upstream geneMgat4c, LOC667652, Nts, Pamci
Downstream geneLOC382413, Cart1, Lrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287J11.bB6Ng01-287J11.g
ACCGA085472GA085473
length1,1051,203
definitionB6Ng01-287J11.b B6Ng01-287J11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccctgtactgggacatataaagtttgtgtacccaatgggcctct
ctttccagtgatggccgactaggccatcttttgatacatatgcagctatt
aaaaagaatgaatttatgaaattcctaggcaaatggatggacctggaggg
tatcatcctgagtgaggtaacacaatcacaaaagaactcaaatgatatgt
actcactgataagtggatattagcccagaaacttagtatagtgagatata
agttacaatttgcaaaacacatgaaactgaagaaaaacgaagaccaaagt
atggacacttggccccttcttagaattggaaacaatcacccatggaagga
gttacagagacaaagtttggagctgagacaaaaggatggaccatctagag
actgccatatccagagatccatcccataattagcctccaaaggatgacac
cattgcatacactagcaagattttgctgaaaggtggaagagtttcataac
agccatccgaatgtcttttcattatagagggaagaggatttctatatgct
tttgaattatgagtaataatgctttgggatgaactaaagagacaaagaat
taggttgaactaagggggggggtactttgtataactaaacatttcatcaa
tgaatattttatggaacaatggcaaatgttgaaagatgtccaagatggag
atttaggaatacctgcaatatacacctgattcagcattcactgcctcatc
aaatctcagtgttacaaagttgagaagagtgaaatctggttacacagctt
gaaatcagcactcttcagctcagaatctagtcttcctttggagaggcatt
tggctagcatccctgggtattgttatacatgcagcagcgaaagaatttca
tcctttctaaattcagaaaggtgataatttgtggaactggatacaaaatg
gatttacaaacaaagtcttaaagaagatgacattatgcagtgttagtaac
tctagaagtatttttagaggtggccacggaagaacaaagcagaacagcat
ttaggacgagttttacagtcgctgtgagggaaacagtactaagaaaccga
tctaa

gaattcctgggcaagggaatgaggaaggagaagaaggggataaccaccat
gtaggggaagaagagaaaacatctcacctgagaagtgctggacagccagc
cagccaacacataagagctggggaagagcagccccagccccccagcccct
cactccgtctagggcaacaaagatggaatatagatttagtaagatataac
tcaggaatatcagaagggagtgtgttagccacataggggtttggaagtgg
ctcagccaatgagttgtttaaggcattttaaaatatgaggatgcatgtgt
gtggctttcatttgggaacccagaacactggggcaggtagcgagcaatgc
accacacactgctgctgctgggtgttgcatctttgggtaatgctacagct
ggttgtgagtggacagtccatgtgtctggtagttgttcagtttacaaggc
tggatgcttctgatggtcttcagtgtctgcttgcatcccaaagaaataga
tttcagtgtcagtgaagggatggacatgctagcaagatgagagcaaaaga
ctttgttttccatggccttatataagcttccagcagaatgtatggcccag
attaacttgtgttttgcagtctcaagatccaaactaaaggtctgtattct
taactcaaagatccagattaaactgtagtagattcctacttcaaattaag
taacaaaatctattttggattctagttctagatgtagtctagatgataac
caagaacagtcatatatatgtgtgtgtttgtttgtatgtgagtgtacccc
tatatttgtcacatatatatttgtatatatgtatttatagctgtatctac
tatatacatatttatgctgtttatatatatatatgcatatgtatatatat
gcatttacataaaaaccatgtttttactcatctttttgttggtgggaaac
taaccctaatttattacctggctattttgaaacagtcatattttaatatg
gtaattatttttattatatttccaataagactttagtggatattggagaa
aatctcaatttccaatgcttttgaggaacttctctggcaaattttttccc
caggggggctgaaactaattttaatccctttaacaaacaaagggataaga
aatggggtttctactccgcccgctatatcaccaataatggtgggtggttt
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_102132098_102133204
seq2: B6Ng01-287J11.b_45_1149

seq1  GAATTCCCCTGTACTGGGACATATAAAGTTTGTGTACCCAATGGGCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTGTACTGGGACATATAAAGTTTGTGTACCCAATGGGCCTCT  50

seq1  CTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTATT  100

seq1  AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGG  150

seq1  TATCATCCTGAGTGAGGTAACACAATCACAAAAGAACTCAAATGATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCCTGAGTGAGGTAACACAATCACAAAAGAACTCAAATGATATGT  200

seq1  ACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGTATAGTGAGATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGTATAGTGAGATATA  250

seq1  AGTTACAATTTGCAAAACACATGAAACTGAAGAAAAACGAAGACCAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAATTTGCAAAACACATGAAACTGAAGAAAAACGAAGACCAAAGT  300

seq1  ATGGACACTTGGCCCCTTCTTAGAATTGGAAACAATCACCCATGGAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACACTTGGCCCCTTCTTAGAATTGGAAACAATCACCCATGGAAGGA  350

seq1  GTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGGACCATCTAGAG  400

seq1  ACTGCCATATCCAGAGATCCATCCCATAATTAGCCTCCAAAGGATGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATATCCAGAGATCCATCCCATAATTAGCCTCCAAAGGATGACAC  450

seq1  CATTGCATACACTAGCAAGATTTTGCTGAAAGGTGGAAGAGTTTCATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCATACACTAGCAAGATTTTGCTGAAAGGTGGAAGAGTTTCATAAC  500

seq1  AGCCATCCGAATGTCTTTTCATTATAGAGGGAAGAGGATTTCTATATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCCGAATGTCTTTTCATTATAGAGGGAAGAGGATTTCTATATGCT  550

seq1  TTTGAATTATGAGTAATAATGCTTTGGGATGAACTAAAGAGACAAAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTATGAGTAATAATGCTTTGGGATGAACTAAAGAGACAAAGAAT  600

seq1  TAGGTTGAACTAAGGGGGGGGGTACTTTGTATAACTAAACATTTCATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGAACTAAGGGGGGGGGTACTTTGTATAACTAAACATTTCATCAA  650

seq1  TGAATATTTTATGGAACAATGGCAAATGTTGAAAGATGTCCAAGATGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTTATGGAACAATGGCAAATGTTGAAAGATGTCCAAGATGGAG  700

seq1  ATTTAGGAATACCTGCAATATACACCTGATTCAGCATTCACTGCCTCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGAATACCTGCAATATACACCTGATTCAGCATTCACTGCCTCATC  750

seq1  AAATCTCAGTGTTACAAAGTTGAGAAGAGTGAAATCTGGTTACACAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCAGTGTTACAAAGTTGAGAAGAGTGAAATCTGGTTACACAGCTT  800

seq1  GAAATCAGCACTCTTCAGCTCAGAATCTAGTCTTCCTTTGGAGAGGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGCACTCTTCAGCTCAGAATCTAGTCTTCCTTTGGAGAGGCATT  850

seq1  TGGCTAGCATCCCTGGGTATTGTTATACATGCAGCAGCGAAAGAATTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGCATCCCTGGGTATTGTTATACATGCAGCAGCGAAAGAATTTCA  900

seq1  TCC-TTCTAAATTCAG-AAGGTGATAA-TTGTGGAACTGGATACAAAATG  947
      ||| |||||||||||| |||||||||| ||||||||||||||||||||||
seq2  TCCTTTCTAAATTCAGAAAGGTGATAATTTGTGGAACTGGATACAAAATG  950

seq1  GATTTACAAACAAAGTCTTAAAG-AGATGACA-TATGCAGTGTTAGTAAC  995
      ||||||||||||||||||||||| |||||||| |||||||||||||||||
seq2  GATTTACAAACAAAGTCTTAAAGAAGATGACATTATGCAGTGTTAGTAAC  1000

seq1  TCTAAGAAGTATTTTTAGAGGTGGCACGGGAAGAACAAAGGCAGAACAAG  1045
      ||| |||||||||||||||||||||   ||||||||||| ||||||| ||
seq2  TCT-AGAAGTATTTTTAGAGGTGGCCACGGAAGAACAAA-GCAGAAC-AG  1047

seq1  CATTAGGAACGAGTTTTTACAGTCGCTGTGGAAGGGAAACAGTACTAAAG  1095
      ||||  | ||||| ||||||||||||||||  |||||||||||||| |||
seq2  CATTTAGGACGAG-TTTTACAGTCGCTGTG--AGGGAAACAGTACT-AAG  1093

seq1  AAAACGATCTAA  1107
      ||| ||||||||
seq2  AAACCGATCTAA  1105


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