BAC Information

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BAC

Clone NameB6Ng01-288B21
Chromosome10 (Build37)
Map Location 75,603,272 - 75,604,192
singlet/doubletsinglet
Overlap genenone
Upstream geneBcr, Specc1l, LOC100040670, Adora2a, EG544707, Upb1, 1110038D17Rik, Snrpd3, AI646023, Ggt1, Ggtla1, Susd2, Cabin1, Ddt, Gstt3, Gstt1, Gstt4, Gstt2, Mif, Derl3, Smarcb1, Mmp11, Ndg2, Gm867, Vpreb3, EG333669, Suhw2, Slc5a4b
Downstream geneSlc5a4a, LOC100040150, Prmt2, S100b, Dip2a, Pcnt, 2610028H24Rik, A130042E20Rik, Mcm3ap, Lss, 1700027D21Rik, Ftcd, Col6a2, Col6a1, Pcbp3, LOC100041099, Slc19a1, Col18a1, LOC665762
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288B21.bB6Ng01-288B21.g
ACCGA085865GA085866
length387927
definitionB6Ng01-288B21.b B6Ng01-288B21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccccagtgtctgtggtgctggcaccctttttcatctgtaatttt
attaatttttttctctttacatcttttagttaacttggctaaatgtttgc
caatcttattaattttttctcagagaactaactctccgttttttttgttt
ctgttttgattctttgtattttttttttaaattacaatgttattgattta
cgccccgagtttggttatttcttgctgactactccttttgtttttgtttt
tgtttttgttttgtttttttgtttcttgagacagggtttctctgtgtagc
cctggctgtcctggaactcactctgtagaccaggctggcctccaactcag
aaatctgcctgcctctgcttcccgacatgcgccacca
gaattcaataaacaaaataaaaagaagtaaagactgggacagggatcatt
gacatagcacaataggactttaaaaatagaagagaagaccaccaaccacc
tcatgtaaacatgcagcaaggagggaacagttaagacaacaggaacaggt
tcttaaaaccactcagagaagaaagattcgaactacagtattttgaaata
gcagttcacatacgtcagtagcaaacattgtaaaacttttaatactcatg
ttaggaagttggcatgcaaacagaactactaagtattgttgcaaggacat
tcaattcccaagtaggggactatggaaaatgcacttacccttcagtcaga
cttcttaaaaatatgtctcggtggtacagcgggtcacatacaaaagagtt
ttgtgcaaagtgtgttttcatggtggcattaaaaaaataagacatgtttc
ttaacagtaatctatgaaaaataattaaagataaagcagaaatctgtgaa
acacagaacaagtatttttggggggatggtgtagaaagtgcatgatcttt
gtgtctaaaagaggctgaaaattaatgaaatacccaactatcatctaacc
taatgtagacatcatatttaatagagtaacctcaaataatgtaaatggaa
gggtatacagagaagatagaaagataaaaaacaaagagaaacaaacccag
aagttagttaattgatagcaaatcgactagcttggtctggaggagaaggt
gtattagggagaacagtaaggaatcagggtgaagaggggattgtgtcaga
cactcaagcatgaccaatcgagactgatcttttggagcacagtatggtag
agatgagtcagtctgtaactgttattttggcagctggcactcgggtttca
tggatagaataatgggatgggatggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_75603272_75604192
seq2: B6Ng01-288B21.g_69_995 (reverse)

seq1  GTCCAT-CCAT-CCATTA-TCTATCCATGAAA-CCGAGTGCCAGCTGCCA  46
      |||||| |||| |||||| ||||||||||||| |||||||||||||||||
seq2  GTCCATCCCATCCCATTATTCTATCCATGAAACCCGAGTGCCAGCTGCCA  50

seq1  AAATAACAGTTACAGACTGACTCATCTCTA-CATACTGTGCT-CAAAAGA  94
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  AAATAACAGTTACAGACTGACTCATCTCTACCATACTGTGCTCCAAAAGA  100

seq1  TCAGTCTCGATTGGTCATGCCTGAGTGTCTGACACAATCCCCTCTTCACC  144
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAGTCTCGATTGGTCATGCTTGAGTGTCTGACACAATCCCCTCTTCACC  150

seq1  CTGATTCCTTACTGTTCTCCCTAATACACCTTCTCCTCCAGACCAAGCTA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCCTTACTGTTCTCCCTAATACACCTTCTCCTCCAGACCAAGCTA  200

seq1  GTCGATTTGCTATCAATTAACTAACTTCTGGGTTTGTTTCTCTTTGTTTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGATTTGCTATCAATTAACTAACTTCTGGGTTTGTTTCTCTTTGTTTT  250

seq1  TTATCTTTCTATCTTCTCTGTATACCCTTCCATTTACATTATTTGAGGTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTCTATCTTCTCTGTATACCCTTCCATTTACATTATTTGAGGTT  300

seq1  ACTCTATTAAATATGATGTCTACATTAGGTTAGATGATAGTTGGGTATTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATTAAATATGATGTCTACATTAGGTTAGATGATAGTTGGGTATTT  350

seq1  CATTAATTTTCAGCCTCTTTTAGACACAAAGATCATGCACTTTCTACACC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTTTCAGCCTCTTTTAGACACAAAGATCATGCACTTTCTACACC  400

seq1  ATCCCCCCAAAAATACTTGTTCTGTGTTTCACAGATTTCTGCTTTATCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCCAAAAATACTTGTTCTGTGTTTCACAGATTTCTGCTTTATCTT  450

seq1  TAATTATTTTTCATAGATTACTGTTAAGAAACATGTCTTATTTTTTTAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTTTCATAGATTACTGTTAAGAAACATGTCTTATTTTTTTAAT  500

seq1  GCCACCATGAAAACACACTTTGCACAAAACTCTTTTGTATGTGACCCGCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATGAAAACACACTTTGCACAAAACTCTTTTGTATGTGACCCGCT  550

seq1  GTACCACCGAGACATATTTTTAAGAAGTCTGACTGAAGGGTAAGTGCATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACCGAGACATATTTTTAAGAAGTCTGACTGAAGGGTAAGTGCATT  600

seq1  TTCCATAGTCCCCTACTTGGGAATTGAATGTCCTTGCAACAATACTTAGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAGTCCCCTACTTGGGAATTGAATGTCCTTGCAACAATACTTAGT  650

seq1  AGTTCTGTTTGCATGCCAACTTCCTAACATGAGTATTAAAAGTTTTACAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGTTTGCATGCCAACTTCCTAACATGAGTATTAAAAGTTTTACAA  700

seq1  TGTTTGCTACTGACGTATGTGAACTGCTATTTCAAAATACTGTAGTTCGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTACTGACGTATGTGAACTGCTATTTCAAAATACTGTAGTTCGA  750

seq1  ATCTTTCTTCTCTGAGTGGTTTTAAGAACCTGTTCCTGTTGTCTTAACTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTCTCTGAGTGGTTTTAAGAACCTGTTCCTGTTGTCTTAACTG  800

seq1  TTCCCTCCTTGCTGCATGTTTACATGAGGTGGTTGGTGGTCTTCTCTTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCTTGCTGCATGTTTACATGAGGTGGTTGGTGGTCTTCTCTTCT  850

seq1  ATTTTTAAAGTCCTATTGTGCTATGTCAATGATCCCTGTCCCAGTCTTTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAGTCCTATTGTGCTATGTCAATGATCCCTGTCCCAGTCTTTA  900

seq1  CTTCTTTTTATTTTGTTTATTGAATTC  921
      |||||||||||||||||||||||||||
seq2  CTTCTTTTTATTTTGTTTATTGAATTC  927