BAC Information

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BAC

Clone NameB6Ng01-288P10
Chromosome10 (Build37)
Map Location 81,038,616 - 81,039,720
singlet/doubletsinglet
Overlap geneTle2
Upstream geneKlf16, D10Bwg1364e, Scamp4, Csnk1g2, Btbd2, Mknk2, Mobkl2a, 9030607L17Rik, Ap3d1, Dot1l, Plekhj1, Sf3a2, Amh, Jsrp1, Oaz1, BC072620, Lsm7, 3110056O03Rik, Tmprss9, Timm13, Lmnb2, Gadd45b, Gng7, LOC100042403, Diras1, Slc39a3, Sgta, Thop1, Creb3l3, Map2k2, Zbtb7a, Pias4, Eef2, Dapk3, Itgb1bp3, Atcay, 9130206N08Rik, Matk, Mrpl54, Apba3, Tjp3, Pip5k1c, 2510012J08Rik, Tbxa2r, Gipc3, Hmg20b, F630110N24Rik, 4930404N11Rik, Fzr1, Dohh, 2210404O07Rik, Nfic, Brunol5, Ncln, Edg6, Gna15, Gna11, Aes
Downstream geneTle6, BC025920, Sirt6, Ankrd24, LOC100040916, EG666448, EG666458, LOC666711, LOC382388, LOC100040944, EG210583, EG666738, EG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288P10.bB6Ng01-288P10.g
ACCGA086491GA086492
length1,2241,121
definitionB6Ng01-288P10.b B6Ng01-288P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcatgtacatgaaggtgactgcgacgtgcaaaggctttacca
cactgagtacatacatacggtttctctccagtatgacatctttcatgtat
atgaaggtgactgcgacgtgcaaaggctttaccacactgagtacatacat
acggtttctctccagtatgacatctttcatgtatataaagattactgcaa
tatgcaaaggctttaccacatagagtacattcatatggtttctcaagagt
atgatgttcctcatgatttcgaagactactacgatttgcaaaggctttac
cacattgattacatccatagggtttctctccagtatgaattatttcatgt
cgatgaagatcactgttatatgcaaaagctttaccacattgattacactc
ataaggtttctctccagtatgcactcttttatgtatttgaagatgactgc
gacctataaaggctttaccgcattgattacattcatatggtttctctcca
gtgtgagttctttcatgtatttgaagatgcctgcgagttgcaaaggcttt
cccacattcatcacaatcataaggtttctctccagtgtgagttcttttgt
gtatttgaagatgactgcgacatgcaaatgctttcccacattcattgcaa
ccatagggtttctctcctgtatgacttcttttatgtattagaagagcgct
gctacgtgcaaatgcttttccacattcactgcaatcatagggtttctctc
ctgtatgagttcttttatgtatttgaagatgactgcgagttgaaaaggct
tttccacattcattacagtcatagagtttctctcttgtatgcgttctttc
gtgtatttgaagagaactgcgacttacaaaggctttactgcactgactac
actcatagggtttttctctagtatgatttttctcatgttttcgaagacta
cggaaatttgcaaaggctttactgcattgactacatccatacggttctct
tcagtttggaattctatcatattatttgaagaaaattgttacagccaaag
gatatattggtctttccatatccctttatgctcaacaagcttgtattccc
acaatgacagattgtttaatactattaaacgagaaattaaccaccaaagt
tcacactgccatacaccacacaggtgaaagttttcattccccaccgattg
agaaataatgtgtgggctcactag
gaattccagtttcttcaagctcagtaccacaggtgagggagccctagttc
tgggccctgggaagccccatgggggtgagcggggactcttggaggggcgt
ggtttctagggcaaggggcggggctcattgggcctactggagggctttct
ggtggaggtggtgcccagaagagtgtgagatgaatggattcagggaaagc
cttccctgagaatgttttggtcccaggagtagatctgggctcgagaggac
tgggaacagtttctaaaggaatggggagccagcagcttctgcctgtcact
gtggaaactgacccatgtggggtgtggcaagtcaacccccatttttgtct
attcttcctgcccagcctcaagctagaatgtgagaagctggccagcgaga
agacagaaatgcaaaggcattatgtgatggtaaggagtacctgcccattc
tgcccacttccgtgttctccctaaaaagggcaggctgggataccaggcac
tgttctgtgggtctccccccccctccaatttgggggactacctgattgtc
ctatctctctgagcccatccgtgatccatcttgtgggttccctgtctggg
tctccatggggctcagggtgtttgtgtcttgccctgatactcgtaccacc
ccctcgaggctgcaccccatcagtgtccccagggtggcaccagctatcca
cactggccaagactgtctcctttgcagtactacgagatgtcctacggact
caacattgagatgcataaacaggtgaccatgtggggtacgggtgtctgcg
gggagggtctaactaagttcatccacatttccaggtggtcatcccaaagg
ttctgagtggatctgagatttgagatagcccttgaaggttctgaggggtc
cagggatcctgagatagcccctgaaaagttctgagataacttgacagttc
ccaaggactgggaggttctgagatagccctgaaggtcttgagggcctgag
cttctgagatagcattggaggttgcattggttgaccccatgggcttctga
agactccagcccttatggtgtaaggttctgagaatacaactctatgggtg
gagatgactttgagagtctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_81038616_81039720
seq2: B6Ng01-288P10.g_68_1188

seq1  GAATTCCAGTTTCTTCAAGCTCAGTACCACAGGTGAGGGAGCCCTAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTTCTTCAAGCTCAGTACCACAGGTGAGGGAGCCCTAGTTC  50

seq1  TGGGCCCTGGGAAGCCCCATGGGGGTGAGCGGGGACTCTTGGAGGGGCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCTGGGAAGCCCCATGGGGGTGAGCGGGGACTCTTGGAGGGGCGT  100

seq1  GGTTTCTAGGGCAAGGGGCGGGGCTCATTGGGCCTACTGGAGGGCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTAGGGCAAGGGGCGGGGCTCATTGGGCCTACTGGAGGGCTTTCT  150

seq1  GGTGGAGGTGGTGCCCAGAAGAGTGTGAGATGAATGGATTCAGGGAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGTGGTGCCCAGAAGAGTGTGAGATGAATGGATTCAGGGAAAGC  200

seq1  CTTCCCTGAGAATGTTTTGGTCCCAGGAGTAGATCTGGGCTCGAGAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGAGAATGTTTTGGTCCCAGGAGTAGATCTGGGCTCGAGAGGAC  250

seq1  TGGGAACAGTTTCTAAAGGAATGGGGAGCCAGCAGCTTCTGCCTGTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACAGTTTCTAAAGGAATGGGGAGCCAGCAGCTTCTGCCTGTCACT  300

seq1  GTGGAAACTGACCCATGTGGGGTGTGGCAAGTCAACCCCCATTTTTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAACTGACCCATGTGGGGTGTGGCAAGTCAACCCCCATTTTTGTCT  350

seq1  ATTCTTCCTGCCCAGCCTCAAGCTAGAATGTGAGAAGCTGGCCAGCGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCCTGCCCAGCCTCAAGCTAGAATGTGAGAAGCTGGCCAGCGAGA  400

seq1  AGACAGAAATGCAAAGGCATTATGTGATGGTAAGGAGTACCTGCCCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAATGCAAAGGCATTATGTGATGGTAAGGAGTACCTGCCCATTC  450

seq1  TGCCCACTTCCGTGTTCTCCCTAAAAAGGGCAGGCTGGGATACCAGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACTTCCGTGTTCTCCCTAAAAAGGGCAGGCTGGGATACCAGGCAC  500

seq1  TGTTCTGTGGGTCTCCCCCCCCCTCCAATTTGGGGGACTACCTGATTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTGGGTCTCCCCCCCCCTCCAATTTGGGGGACTACCTGATTGTC  550

seq1  CTATCTCTCTGAGCCCATCCGTGATCCATCTTGTGGGTTCCCTGTCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTCTGAGCCCATCCGTGATCCATCTTGTGGGTTCCCTGTCTGGG  600

seq1  TCTCCATGGGGCTCAGGGTGTTTGTGTCTTGCCCTGATACTCGTACCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATGGGGCTCAGGGTGTTTGTGTCTTGCCCTGATACTCGTACCACC  650

seq1  CCCTCGAGGCTGCACCCCATCAGTGTCCCCAGGGTGGCACCAGCTATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGAGGCTGCACCCCATCAGTGTCCCCAGGGTGGCACCAGCTATCCA  700

seq1  CACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTACGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCAAGACTGTCTCCTTTGCAGTACTACGAGATGTCCTACGGACT  750

seq1  CAACATTGAGATGCATAAACAGGTGACCATGTGGGGTACGGGTGTCTGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGAGATGCATAAACAGGTGACCATGTGGGGTACGGGTGTCTGCG  800

seq1  GGGAGGGTCTAACTAAGTTCATCCACATTT-CAGGTGGTCATCCCAAAGG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGGAGGGTCTAACTAAGTTCATCCACATTTCCAGGTGGTCATCCCAAAGG  850

seq1  TTCTGAGTGGATCTGAGATTTGAGATAGCCC-TGAAGGTTCTGA-GGGTT  897
      ||||||||||||||||||||||||||||||| |||||||||||| |||| 
seq2  TTCTGAGTGGATCTGAGATTTGAGATAGCCCTTGAAGGTTCTGAGGGGTC  900

seq1  CAAGGAT-CTGAGATAG-CCCTG-AAAGTTCTGAGATAAC-TGACAGTT-  942
      || |||| ||||||||| ||||| |||||||||||||||| |||||||| 
seq2  CAGGGATCCTGAGATAGCCCCTGAAAAGTTCTGAGATAACTTGACAGTTC  950

seq1  CCAAGGACT-GGAGGTTCTGAGATAGCCCTGAAGGTTCTGAGGGCTTGAG  991
      ||||||||| ||||||||||||||||||||||||||  ||||||| ||||
seq2  CCAAGGACTGGGAGGTTCTGAGATAGCCCTGAAGGTCTTGAGGGCCTGAG  1000

seq1  CTTCTGAGATAGCATTTGGAGTTGCA-TGGTTGATCCCATGGGCTTCTG-  1039
      |||||||||||||||| |  |||||| ||||||| |||||||||||||| 
seq2  CTTCTGAGATAGCATTGGAGGTTGCATTGGTTGACCCCATGGGCTTCTGA  1050

seq1  AGACTCCAGCC--TATGGTGTTAGGGTTCTGAG-ATAC-ACTCTAT--GT  1083
      |||||||||||  ||||||| || ||||||||| |||| |||||||  ||
seq2  AGACTCCAGCCCTTATGGTG-TAAGGTTCTGAGAATACAACTCTATGGGT  1099

seq1  GGAGATTGACTTTGAG-GTCTGT  1105
      ||||| |||||||||| ||||||
seq2  GGAGA-TGACTTTGAGAGTCTGT  1121