BAC Information

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BAC

Clone NameB6Ng01-289I19
Chromosome10 (Build37)
Map Location 23,835,807 - 23,978,857
singlet/doubletdoublet
Overlap geneStx7, Moxd1
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9
Downstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289I19.bB6Ng01-289I19.g
ACCGA086916GA086917
length1,1451,112
definitionB6Ng01-289I19.b B6Ng01-289I19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,835,807 - 23,836,655)(23,977,767 - 23,978,857)
sequence
gaattcttattacagttatgtacggcaggctacattacttaatagaagaa
aggcccccacaaattcacctagaataacagccgagtcactcccattacag
gaatttgcaatggcctaggaagtaggaaggttgtggtctaagaaggaact
agaataaattcttagaataacagctgagtcactcccatacacaggaattt
acaaaggcctagaaagaaggtggattaactatggcaagggcataaagccc
ttgcccctggcttctaagaataagctgaccttagatggggctgcttttta
tcccagttgtaaacactgcctgactcctgtcagctattatgtatgcattt
ctctgttctgtgtaaagagtcattttgcattgggtaacctcaatgtacct
ggataaccttaatgtatcacctaacttccttgttttcttctgtaatttaa
gtctgatgctcgatttgagacattacattcagatgcagcactctctgtgt
cagtgtctgtttgtcactttctgccgactccttgcctatctgggtaccag
gaccctgattctcctgtgggttgagggactgactgagtcaagtctgccgc
aacatatcctttcatgtgcttgcttttgaagaataccatttcacctgagt
ctgcttcattgaaacattccttcgtgagtctgccttagcctttcacctgt
atccacttcagctagacattccttcatttgtttgccttagcaaaacgcca
tccaacacactgactttgcaaagaatcctttcactttccacttcaaatat
gccttaagatcatataaaacagggctggaatgaggctcagtggctaagag
tcctgactactcttccagaggtcctgagttcaatttccagcaaccacatg
gtggctcataaccatctatatgggatctgatgccctcttctggtgtgtct
gaagacagtgactatgtatatacaaaatgaatctttaaaaaaaaatcata
caaacccatgtactttaactctactgtggactaagcctgaataagtttaa
cctcattttttccctcgtctctgccttgaatttttttaagattaggattt
attcattacattccaatgcctatctcaaaaagtcccaacaccctc
gaattcaatccctttgtagtttatgtgactataaagaacacccaggtaga
tagacaaacccctgatatatctgacatagatgtagcccaggaggatactg
agcagtcttcaacattgattaccctgcctgtatcagcaatctttaaaatt
tgcttctctaagtcacatcattaccagtaaggttgatgttcctactaata
tctctccaaccaaaagcttaggtttagccagcacaaataccctgggcttc
tcatcttttcatatatatgtgtgtatgtatctgtatatatttgtgtgtgt
gtgtgtgtgcgtgtataaaatcagatgctttaaatataagggatataatt
atttgtcactgattctctatgtagcacaaattactaaaatgtggattgtt
gaaacttttctatttacagcatgaacttttactggaatcatgagtattgc
aaagtttttagaagaagtggaacatggcttaacatgaggcttattgtgaa
aatgcatttgtctcaacttgttaaacagatccatcgacagatccaaagat
ctgcctccagggagtacagtaagagagccagggatgaaagctagacagtg
gtgagcaaaagccattccccgtggtcagagcagatctggaaaaagcacac
tggaccaccgagtcagtcgacagcaaacatcttgttcccacatggtaacg
tgagcacatggcaaagactgataacagtgtgggcacacaccctgaagaca
agaccaacaagcatcgccatggggagggaaggcagtcagcatcagtgaag
atgccacttcaggaggaagacaaggagtgagatacactgagagagaaaag
ctaactctgatccctcagaggatcgagtagtttttatatcagtcagggtc
aattcccatgattatgaaaatcgactcccgtttactccctcttaaaaata
agtaccctaattagggacatttgatgttcctgtgaacatgctttaatgat
ggaagtttctccacctcaacaatgtccttttccattctaaggaaatgtaa
ttgacaccagcccaatcttatttatctatgaatatattgacagaaacatt
accttctatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23835807_23836655
seq2: B6Ng01-289I19.b_345_1192

seq1  TTATCCCAGTTGTAAACACTGCCTGACTCCTGTCAGCTATTATGTATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCCAGTTGTAAACACTGCCTGACTCCTGTCAGCTATTATGTATGCA  50

seq1  TTTCTCTGTTCTGTGTAAAGAGTCATTTTGCATTGGGTAACCTCAATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTTCTGTGTAAAGAGTCATTTTGCATTGGGTAACCTCAATGTA  100

seq1  CCTGGATAACCTTAATGTATCACCTAACTTCCTTGTTTTCTTCTGTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATAACCTTAATGTATCACCTAACTTCCTTGTTTTCTTCTGTAATT  150

seq1  TAAGTCTGATGCTCGATTTGAGACATTACATTCAGATGCAGCACTCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTGATGCTCGATTTGAGACATTACATTCAGATGCAGCACTCTCTG  200

seq1  TGTCAGTGTCTGTTTGTCACTTTCTGCCGACTCCTTGCCTATCTGGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTGTCTGTTTGTCACTTTCTGCCGACTCCTTGCCTATCTGGGTAC  250

seq1  CAGGACCCTGATTCTCCTGTGGGTTGAGGGACTGACTGAGTCAAGTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCTGATTCTCCTGTGGGTTGAGGGACTGACTGAGTCAAGTCTGC  300

seq1  CGCAACATATCCTTTCATGTGCTTGCTTTTGAAGAATACCATTTCACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAACATATCCTTTCATGTGCTTGCTTTTGAAGAATACCATTTCACCTG  350

seq1  AGTCTGCTTCATTGAAACATTCCTTCGTGAGTCTGCCTTAGCCTTTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCTTCATTGAAACATTCCTTCGTGAGTCTGCCTTAGCCTTTCACC  400

seq1  TGTATCCACTTCAGCTAGACATTCCTTCATTTGTTTGCCTTAGCAAAACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCACTTCAGCTAGACATTCCTTCATTTGTTTGCCTTAGCAAAACG  450

seq1  CCATCCAACACACTGACTTTGCAAAGAATCC-TTCACTTTCCACTTCAAA  499
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCATCCAACACACTGACTTTGCAAAGAATCCTTTCACTTTCCACTTCAAA  500

seq1  TATGCCTTAAGATCATATAAAACAGGGCTGGAATGAGGCTCAGTGGCTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTAAGATCATATAAAACAGGGCTGGAATGAGGCTCAGTGGCTAA  550

seq1  GAGTCCTGACTACTCTTCCAGAAGTCCTGAGTTCAATTTCCAGCAACCAC  599
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGTCCTGACTACTCTTCCAGAGGTCCTGAGTTCAATTTCCAGCAACCAC  600

seq1  ATGGTGGCTCATAACCATCTATAATGGGATCTGATGCCCTCTTCTGGTGT  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATGGTGGCTCATAACCATCTAT-ATGGGATCTGATGCCCTCTTCTGGTGT  649

seq1  GTCTGAAGACAGTGACTATGTATATACAAAATGAATCTTTAAAAAAAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGACAGTGACTATGTATATACAAAATGAATCTTTAAAAAAAAAT  699

seq1  CATACAAAACCATGTAC-TTAACTCTACTGTGGACTAAGCCTGAATAAGT  748
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  CATACAAACCCATGTACTTTAACTCTACTGTGGACTAAGCCTGAATAAGT  749

seq1  TTAA-CTCATTTTTTTCCTTCGTCTCTGCTTTGTATTTTTTTAAAATTAG  797
      |||| |||| |||||||| |||||||||| ||| |||||||||| |||||
seq2  TTAACCTCA-TTTTTTCCCTCGTCTCTGCCTTGAATTTTTTTAAGATTAG  798

seq1  GTATTTATTTCATTTACATTTCCAATG-CTATCTC-AAAAGTCCCCACAC  845
      | ||||| |||| ||||| |||||||| ||||||| ||||||||| ||||
seq2  G-ATTTA-TTCA-TTACA-TTCCAATGCCTATCTCAAAAAGTCCCAACAC  844

seq1  CCTC  849
      ||||
seq2  CCTC  848

seq1: chr10_23977767_23978857
seq2: B6Ng01-289I19.g_71_1182 (reverse)

seq1  GGCATAG-AGTAAATGTTTCTGTCATTATA-TCATAGATTAAATAGATTT  48
      ||||||| ||  ||||||||||||| |||| |||||||| ||  ||||| 
seq2  GGCATAGAAGGTAATGTTTCTGTCAATATATTCATAGATAAATAAGATTG  50

seq1  GGCT-GTGTTCATT-CATTT-CTTAGAATG--AAAGGACATTGTTGA-GT  92
      |||| ||||  ||| ||||| |||||||||  ||||||||||||||| ||
seq2  GGCTGGTGTCAATTACATTTCCTTAGAATGGAAAAGGACATTGTTGAGGT  100

seq1  GGAG-AACTT-CATCATTAAAGCATG-TCACA-GAACATCAAATGT-CCT  137
      |||| ||||| ||||||||||||||| ||||| ||||||||||||| |||
seq2  GGAGAAACTTCCATCATTAAAGCATGTTCACAGGAACATCAAATGTCCCT  150

seq1  AA-TAGGTTACT--ATTTTAAGA--GAGTAAAC-GGAGTCGATTTTCATA  181
      || |||| ||||   ||||||||  |||||||| ||||||||||||||||
seq2  AATTAGGGTACTTATTTTTAAGAGGGAGTAAACGGGAGTCGATTTTCATA  200

seq1  ATCATGGGAATTTGACCCTGACTGATAT-AAAACTACTCGATCCTCTGA-  229
      |||||||||| ||||||||||||||||| |||||||||||||||||||| 
seq2  ATCATGGGAA-TTGACCCTGACTGATATAAAAACTACTCGATCCTCTGAG  249

seq1  GGATCAGAGTTAGCTTTTCTCTCTCAGTGTATCTCACTCC-TGTCTTCCT  278
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGATCAGAGTTAGCTTTTCTCTCTCAGTGTATCTCACTCCTTGTCTTCCT  299

seq1  CCTGAAGTGGCATCTTCACTGATGCTGACTGCCTTCCCTCCCCATGGCGA  328
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGTGGCATCTTCACTGATGCTGACTGCCTTCCCTCCCCATGGCGA  349

seq1  TGCTTGTTGGTCTTGTCTTCAGGGTGTGTGCCCACACTGTTATCAGTCTT  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTGGTCTTGTCTTCAGGGTGTGTGCCCACACTGTTATCAGTCTT  399

seq1  TGCCATGTGCTCACGTTACCATGTGGGAACAAGATGTTTGCTGTCGACTG  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTGCTCACGTTACCATGTGGGAACAAGATGTTTGCTGTCGACTG  449

seq1  ACTCGGTGGTCCAGTGTGCTTTTTCCAGATCTGCTCTGACCACGGGGAAT  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGTGGTCCAGTGTGCTTTTTCCAGATCTGCTCTGACCACGGGGAAT  499

seq1  GGCTTTTGCTCACCACTGTCTAGCTTTCATCCCTGGCTCTCTTACTGTAC  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTGCTCACCACTGTCTAGCTTTCATCCCTGGCTCTCTTACTGTAC  549

seq1  TCCCTGGAGGCAGATCTTTGGATCTGTCGATGGATCTGTTTAACAAGTTG  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGAGGCAGATCTTTGGATCTGTCGATGGATCTGTTTAACAAGTTG  599

seq1  AGACAAATGCATTTTCACAATAAGCCTCATGTTAAGCCATGTTCCACTTC  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATGCATTTTCACAATAAGCCTCATGTTAAGCCATGTTCCACTTC  649

seq1  TTCTAAAAACTTTGCAATACTCATGATTCCAGTAAAAGTTCATGCTGTAA  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAAACTTTGCAATACTCATGATTCCAGTAAAAGTTCATGCTGTAA  699

seq1  ATAGAAAAGTTTCAACAATCCACATTTTAGTAATTTGTGCTACATAGAGA  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAGTTTCAACAATCCACATTTTAGTAATTTGTGCTACATAGAGA  749

seq1  ATCAGTGACAAATAATTATATCCCTTATATTTAAAGCATCTGATTTTATA  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGACAAATAATTATATCCCTTATATTTAAAGCATCTGATTTTATA  799

seq1  CACGCACACACACACACACACAAATATATACAGATACATACACACATATA  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCACACACACACACACACAAATATATACAGATACATACACACATATA  849

seq1  TATGAAAAGATGAGAAGCCCAGGGTATTTGTGCTGGCTAAACCTAAGCTT  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAAGATGAGAAGCCCAGGGTATTTGTGCTGGCTAAACCTAAGCTT  899

seq1  TTGGTTGGAGAGATATTAGTAGGAACATCAACCTTACTGGTAATGATGTG  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGAGAGATATTAGTAGGAACATCAACCTTACTGGTAATGATGTG  949

seq1  ACTTAGAGAAGCAAATTTTAAAGATTGCTGATACAGGCAGGGTAATCAAT  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAGAAGCAAATTTTAAAGATTGCTGATACAGGCAGGGTAATCAAT  999

seq1  GTTGAAGACTGCTCAGTATCCTCCTGGGCTACATCTATGTCAGATATATC  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGACTGCTCAGTATCCTCCTGGGCTACATCTATGTCAGATATATC  1049

seq1  AGGGGTTTGTCTATCTACCTGGGTGTTCTTTATAGTCACATAAACTACAA  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTGTCTATCTACCTGGGTGTTCTTTATAGTCACATAAACTACAA  1099

seq1  AGGGATTGAATTC  1091
      |||||||||||||
seq2  AGGGATTGAATTC  1112