MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-289K01
Chromosome	10 (Build37)
Map Location	94,228,866 - 94,372,606
singlet/doublet	doublet
Overlap gene	4921537D05Rik, Plxnc1
Upstream gene	LOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955, Tmcc3, EG667315
Downstream gene	Cradd, Socs2, LOC100042004, D10Ertd322e, Ube2n, Nudt4, EG628119
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041907 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 449 ESTs, 6 Proteins pseudo : _no_value

name	Usp44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:327799 MGI:3045318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Metap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56307 MGI:1929701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Vezt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215008 MGI:2143698
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fgd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13998 MGI:1261419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nr2c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22025 MGI:1352465
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufa12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66414 MGI:1913664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG215472 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215472 MGI:3648918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041955 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Tmcc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319880 MGI:2442900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667315 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667315 MGI:3649017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	4921537D05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77048 MGI:1924298
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Plxnc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54712 MGI:1890127
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cradd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12905 MGI:1336168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Socs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:216233 MGI:1201787
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042004 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	D10Ertd322e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67270 MGI:1196413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2n (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93765 MGI:1934835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71207 MGI:1918457
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628119 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628119 MGI:3646302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 32 ESTs, 4 Proteins

name	Usp44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344982 GeneID:327799 MGI:3045318
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 44 transcript_id : NM_183199.2

name	Metap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83779008 GeneID:56307 MGI:1929701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methionine aminopeptidase 2 transcript_id : NM_019648.3

name	Vezt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365165 GeneID:215008 MGI:2143698
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vezatin, adherens junctions transmembrane protein transcript_id : NM_172538.3

name	Fgd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37693996 GeneID:13998 MGI:1261419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FYVE, RhoGEF and PH domain containing 6 transcript_id : NM_053072.2

name	Nr2c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982759 GeneID:22025 MGI:1352465
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear receptor subfamily 2, group C, member 1 transcript_id : NM_011629.2

name	Ndufa12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354746 GeneID:66414 MGI:1913664
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 transcript_id : NM_025551.2

name	EG215472 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374877 GeneID:215472 MGI:3648918
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG215472 transcript_id : NM_174999.2

name	LOC100041955 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261020 GeneID:100041955
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100041955 transcript_id : XM_001477257.1

name	Tmcc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78771619 GeneID:319880 MGI:2442900
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane and coiled coil domains 3 transcript_id : NM_172051.2

name	EG667315 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388569 GeneID:667315 MGI:3649017
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : predicted gene, EG667315 transcript_id : XM_989715.1

name	4921537D05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430700 GeneID:77048 MGI:1924298
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs product : RIKEN cDNA 4921537D05 gene transcript_id : NM_027479.1

name	Plxnc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9055375 GeneID:54712 MGI:1890127
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plexin C1 transcript_id : NM_018797.1

name	Cradd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892137 GeneID:12905 MGI:1336168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CASP2 and RIPK1 domain containing adaptor with death domain transcript_id : NM_009950.2

name	Socs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379297 GeneID:216233 MGI:1201787
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : suppressor of cytokine signaling 2 transcript_id : NM_007706.3

name	D10Ertd322e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803237 GeneID:67270 MGI:1196413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 10, ERATO Doi 322, expressed transcript_id : NM_026065.3

name	Ube2n (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131101 GeneID:93765 MGI:1934835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2N transcript_id : NM_080560.3

name	Nudt4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803369 GeneID:71207 MGI:1918457
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleoside diphosphate linked moiety X)-type motif 4 transcript_id : NM_027722.3

name	EG628119 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388573 GeneID:628119 MGI:3646302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 32 ESTs, 4 Proteins product : predicted gene, EG628119 transcript_id : XM_892842.2

name	Usp44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147264 CCDS:CCDS24129.1 GeneID:327799 MGI:3045318
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ubiquitin specific peptidase 44 protein_id : NP_899022.1

name	Metap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789873 GeneID:56307 MGI:1929701
definition	EC_number : 3.4.11.18 GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008235 - metalloexopeptidase activity [Evidence IEA]; GO:0004239 - methionyl aminopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : eIF-2-associated p67; initiation factor 2-associated protein (p67); peptidase M 2 product : methionine aminopeptidase 2 protein_id : NP_062622.1

name	Vezt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542087 GeneID:215008 MGI:2143698
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_process : GO:0016337 - cell-cell adhesion [Evidence IMP]; GO:0043009 - embryonic development (sensu Vertebrata) [Evidence IMP] codon_start : 1 product : transmembrane protein vezatin protein_id : NP_766126.2

name	Fgd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37693997 GeneID:13998 MGI:1261419
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : ethanol decreased 4 product : FYVE, RhoGEF and PH domain containing 6 protein_id : NP_444302.3

name	Nr2c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982760 CCDS:CCDS24131.1 GeneID:22025 MGI:1352465
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0042826 - histone deacetylase binding [Evidence IPI]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence ISS] [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : early embryonic nuclear receptor; 80-3 cNDA; orphan receptor, TR2-11; nuclear receptor subfamily 2, group H, member 1 product : nuclear receptor subfamily 2, group C, member 1 protein_id : NP_035759.2

name	Ndufa12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27228985 CCDS:CCDS24132.1 GeneID:66414 MGI:1913664
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : 13kDa differentiation-associated protein protein_id : NP_079827.2

name	EG215472 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239389 GeneID:215472 MGI:3648918
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC215472 protein_id : NP_778164.1

name	LOC100041955 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261021 GeneID:100041955
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477307.1

name	Tmcc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78771620 CCDS:CCDS24134.1 GeneID:319880 MGI:2442900
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : transmembrane and coiled coil domains 1 product : transmembrane and coiled coil domains 3 protein_id : NP_742048.2

name	EG667315 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388570 GeneID:667315 MGI:3649017
definition	codon_start : 1 product : hypothetical protein protein_id : XP_994809.1

name	4921537D05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430701 GeneID:77048 MGI:1924298
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC77048 protein_id : NP_081755.1

name	Plxnc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9055376 GeneID:54712 MGI:1890127
definition	codon_start : 1 exception : unclassified translation discrepancy note : viral-encoded semaphorin protein receptor product : plexin C1 protein_id : NP_061267.1

name	Cradd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753516 CCDS:CCDS24135.1 GeneID:12905 MGI:1336168
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0030693 - caspase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : CASP2 and RIPK1 domain-containing adaptor with death domain product : CASP2 and RIPK1 domain containing adaptor with death domain protein_id : NP_034080.1

name	Socs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671756 CCDS:CCDS24136.1 GeneID:216233 MGI:1201787
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0005131 - growth hormone receptor binding [Evidence ISS]; GO:0005159 - insulin-like growth factor receptor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0009968 - negative regulation of signal transduction [Evidence IEA]; GO:0045666 - positive regulation of neuron differentiation [Evidence IDA]; GO:0040014 - regulation of body size [Evidence IMP]; GO:0001558 - regulation of cell growth [Evidence ISS] [Evidence IEA] codon_start : 1 note : cytokine inducible SH2-containing protein 2; STAT-induced STAT inhibitor 2; cytokine-inducible SH2 protein 2 product : suppressor of cytokine signaling 2 protein_id : NP_031732.1

name	D10Ertd322e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385564 CCDS:CCDS24137.1 GeneID:67270 MGI:1196413
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 product : mitochondrial ribosomal protein L42 protein_id : NP_080341.1

name	Ube2n (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18017605 GeneID:93765 MGI:1934835
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS]; GO:0031372 - UBC13-MMS2 complex [Evidence ISS] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI]; GO:0043130 - ubiquitin binding [Evidence ISS]; GO:0004840 - ubiquitin conjugating enzyme activity [Evidence IDA] [Evidence ISS]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0045739 - positive regulation of DNA repair [Evidence ISS]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0016567 - protein ubiquitination [Evidence ISS]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 product : ubiquitin-conjugating enzyme E2N protein_id : NP_542127.1

name	Nudt4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541994 CCDS:CCDS24138.1 GeneID:71207 MGI:1918457
definition	GO_component : GO:0005622 - intracellular [Evidence ISS] GO_function : GO:0008486 - diphosphoinositol-polyphosphate diphosphatase activity [Evidence ISS] [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence ISS]; GO:0019935 - cyclic-nucleotide-mediated signaling [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence ISS]; GO:0046907 - intracellular transport [Evidence ISS]; GO:0046831 - regulation of RNA export from nucleus [Evidence ISS] codon_start : 1 exception : mismatches in translation product : nudix-type motif 4 protein_id : NP_081998.2

name	EG628119 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83027699 GeneID:628119 MGI:3646302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_897935.1

name	LOC100042004 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042004
definition	number : 2 pseudo : _no_value

name	LOC100042004 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042004
definition	number : 1 pseudo : _no_value

name	LOC100041907 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261019 GeneID:100041907
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 449 ESTs, 6 Proteins product : similar to farnesyl pyrophosphate synthase pseudo : _no_value transcript_id : XR_033108.1

clone name	MSMg01-537C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524L08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-134O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469G14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061L12
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-289K01.b	B6Ng01-289K01.g
ACC	GA086972	GA086973
length	1,133	956
definition	B6Ng01-289K01.b	B6Ng01-289K01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(94,228,866 - 94,229,991)	(94,371,666 - 94,372,606)
sequence	gaattccagggcactcaagactacatagagaaactctgtctcaaaaccaa ccaaacaaaaatccaccaccaataaaacattgctgctgttgtatccatgt gtaattctcattgttgccactccatactctgtacttgttgctaaagatgt aatttgtgtttttttatgtgaatataatatcgctgccaagagtctaaata tttaggattatatattgcattgtgcctattgtcaaacaaccatcctgtag aatgattgaccagttcaatgaaataaatgaattattgattcataatttct ttgtttggttatggtttttaggttaaaacttcaacaacaaattgtgaata ccgaaaaagcagaaaaagaaaaacttgaaaattctgaactgaaacaggtg attgtaatgcagtttgcttttattttgttgaatgcttctttttagtctgt tttgtgtagcttttgcagttaataataattaatactttgtaatctgatca ccataattcataatatactgatgaagctgttatgtaaagataaaatgttt caaattttctgctataatttagtagacttgctttacttttgctgtttacc ttaatatattggtacgtggtagcctttgacaaattttttgttatagttaa aataacatattttggcattctgaattttaaaattagaaatattcagcttt ttaagttacacatgtaaaaatattctgtgacacgtcataggtttttgttg ttttggttttgttttcttgctgtatttgtctaaaatttaagagttgtgtt tataggaagaaagttttattttagttaaaagaaatatttctataatgtag ggtaaagtacacatgaatatttgtttctaaattctgttttttcattttgc ttgggatgtttctattttcttagattatgagtagtgaggattccacttag aattttccccatctgctgacactgcccttgcacatgcactttgaggacct gaattgagagaaaataatgcttgcatgtcagctgaaactgcttgtgtgtg ccacttatggagcctcaagtggccagggcacagtacttcagacacctgtg ttttccgcctgttctattggatctaagagttaa	gaattcttacaatatggaagtcattgtgttttgtagggtctgtatgtgta ctgggttgtgtgtgtgtgtgtgtgtggacacatgcatgtaataaagaata ctaatgaaatatgttaatgaaattattactccacttatatatatgagcag tctaagactgggaaaggcaagcagttccaggagatatgtgtgtatatatc tgacgtgtatatctacatgtagatacagatataacatatctctatgtatt gtctttaacagggctagaactcaaactcggtcctgattctagaacccatg ctttatcctggcctggtagttttgatccatgaccctctgaacacactaag taagaagaaggcattcgggacttaaataattacacaatggatgtcacagg ggcccttaccctccccccatttgtcacttcttcttttttagccactctca ggaggagagcaatgactgtcctacgtgtgcttgcctttttgagtcacagg ctaggggtgacagtatcaagtattcttagaaaggccacattgctcttttc agtttggaaagttggatatatccagtgatcccattaaagatggtctcaca tctgactctcccttagcctttttcggctttacaccacggccttctgcgcc ggtctactcagtcaaacactgttatgtctctttccctgggatcccagatt tgaaagacttttgtctattcaacaaactgttgtttatgaagtaaccattc ccattcccaggcttttatttatcaagggacatctcaaaactgccagccag agtactggactgtgctaccacgcaacgctgataaaaattccaacccccct cccccctaccagagcaaagcttctggaagtctggcttagtcttgtgccat attttttttccaatttgcttttggaagattactgcaagcgctcattaatt tcccat
quality values	Open. Hide. 58 36 16 31 62 62 38 11 62 54 49 41 56 47 62 47 42 62 62 47 47 62 62 54 47 62 62 62 59 62 59 59 44 47 59 46 34 46 34 32 59 49 30 54 54 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 59 62 62 42 54 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 54 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 54 49 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 49 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 45 34 58 58 58 58 46 58 52 58 58 49 52 58 58 58 58 58 58 58 58 58 58 54 54 54 47 54 58 58 54 45 54 58 58 52 54 54 58 58 58 58 58 58 42 58 58 58 58 58 58 58 54 58 58 48 58 48 50 51 58 54 58 51 58 58 58 51 58 51 58 58 45 51 49 51 54 58 58 58 49 58 50 58 58 58 58 58 54 47 52 41 58 50 48 58 58 58 58 58 58 53 51 50 54 51 53 53 41 46 58 49 44 51 49 51 51 52 58 53 54 58 58 58 58 37 37 46 58 58 52 58 51 58 43 40 58 58 51 42 58 58 58 50 50 50 50 51 49 41 40 30 32 58 53 40 53 53 58 58 58 58 35 50 50 37 41 34 35 50 39 52 45 53 54 35 33 54 54 54 30 35 37 41 49 53 53 49 50 52 41 37 39 49 37 52 49 39 49 33 7 28 31 54 54 54 41 42 35 53 53 23 54 54 53 54 54 27 54 54 42 47 25 54 54 52 45 40 52 53 37 52 53 32 33 30 54 52 51 35 47 45 53 54 46 42 32 49 30 20 47 18 46 19 33 33 30 26 47 40 40 33 32 42 31 31 30 33 27 28 47 49 47 20 13 47 51 24 33 31 51 51 31 31 22 34 51 37 51 51 41 26 51 51 37 30 27 42 51 41 32 36 39 42 28 32 31 45 28 43 38 51 31 18 29 48 46 31 31 30 31 36 41 31 41 31 33 37 41 30 31 46 35 37 36 48 38 43 34 32 46 24 29 31 31 38 32 27 47 47 47 47 39 23 19 37 41 41 23 30 32 30 37 37 33 26 34 18 35 31 46 27 31 31 31 30 47 46 30 30 14 30 28 18 37 31 8 22 19 34 37 20 25 31 35 31 24 32 31 15 18 13 21 30 27 31 33 31 20 22 23 34 21 31 48 48 31 32 48 44 38 22 28 29 27 29 29 31 27 20 6 4 8 32 34 13 47 18 32 22 32 31 8 12 16 23 27 32 19 27 32 43 22 27 32 7 13 22 16 13 12 17 18 25 14 14 18 21 8 27 12 21 6 5 9 13 19 24 7 21 27 27 20 28 20 14 20 23 16 16 13 6 22 28 16 20 47 23 27 24 28 16 21 10 8 10 27 19 27 18 21 8 7 12 6 11 12 20 17 28 10 16 5 12 7 11 27 9 14 13 15 20 25 6 8 23 5 28 17 9 7 7 8 9 16 21 20 9 8 12 12 9 22 7 7 4 15 9 19 9 18 11 30 24 12 8 6 11 4 5 5 6 6 6 15 4 11 9 10 20 14 10 7 7 7 4 4 4 12 3 1 4 5 23	Open. Hide. 62 47 39 44 62 62 62 54 62 59 39 25 34 28 23 32 28 28 34 45 50 62 62 62 62 62 62 62 54 49 62 62 62 62 59 62 62 54 54 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 54 43 49 43 54 56 62 59 62 62 62 62 62 49 54 62 62 62 62 62 62 62 59 62 59 62 56 62 62 59 62 62 62 59 59 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 59 59 59 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 56 54 62 59 62 54 54 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 56 54 49 48 46 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 59 56 62 59 62 59 59 59 59 59 59 62 62 62 62 62 62 62 62 59 62 56 62 62 62 62 62 62 62 62 59 59 59 62 62 59 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 56 54 54 62 62 59 59 54 46 59 62 59 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 59 62 62 59 62 62 62 59 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 59 59 59 59 62 62 62 62 62 56 50 56 46 46 59 59 56 59 59 62 62 62 59 59 59 51 59 59 59 62 62 62 62 62 59 44 62 62 51 62 59 59 59 59 59 59 44 59 62 18 14 8 20 13 59 56 47 44 56 51 62 62 62 62 62 56 62 62 56 56 44 56 51 56 62 56 62 56 56 56 56 56 56 56 62 56 51 56 51 62 43 56 47 62 62 56 31 43 56 37 39 42 37 38 39 56 38 43 56 62 56 47 51 34 56 56 56 47 47 43 56 56 56 62 47 47 47 47 47 56 56 56 56 56 56 50 32 42 43 42 56 39 56 50 62 56 54 49 47 45 54 38 54 62 47 62 38 15 19 43 43 36 20 38 52 62 52 52 50 31 10 38 38 35 47 28 33 35 12 27 32 49 45 52 52 52 46 46 46 54 34 54 48 48 36 39 48 52 48 42 33 40 46 47 52 52 54 39 54 38 39 41 42 42 14 18 52 52 28 20 13 15 19 16 22 32 26 31 46 46 46 46 47 41 32 16 23 37 54 49 28 35 54 30 16 12 12 41 26 47 47 46 49 28 37 50 38 41 51 51 50 50 49 50 35 24 50 13 12 58 32 30 30 50 50 34 48 13 47 48 34 39 41 29 37 36 39 51 49 42 20 53 32 41 29 25 27 32 50 49 39 32 32 11 19 10 23 26 17 31 15 34 39 21 7 10 41 39 42 13 17 50 42 34 21 12 32 32 31 21 33 35 40 50 40 33 40 24 25 35 25 43 21 29 11 33 22 23 41 50 13 17 35 41 41 16 52 32 9 15 10 25 26 33 28 24 32 43 47 42 50 37 54 32 34 40 40 31 14 25 20 35 40 24 39 52 12 21 37 37 34 18 16 29 25 13 24 17 35 41 45 24 16 23 9 11 12 28 41 8 13 4 5 11 12 28 19 12 37 37 32 8 15 9 14 9 21 33 34 35 40 22 39 19 39 20 52 52 37 34 13 6 10 16 23 18 6 25 27 24 14 31 45 22 23 29 14 32 27 22 28 10 18 25 19 32 23 51 26 31 13 34 19 9 20 31 7 7 28 5 21 6 12 9 16 17 15 30 32 31 40 40 26 32 18 10 6 7 22 40 29 38 9 23 40 16 40 14 9 7 13 12 16 7 12 8 15 18 30 20 22 21 12 25 16 30 32 12 16 19 10 12 30 12 30 18 31 27 25 11 26

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_94228866_94229991
seq2: B6Ng01-289K01.b_48_1180

seq1  GAATTCCAGGGCACTCAAGACTACATAGAGAAACTCTGTCTCAAAACCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCACTCAAGACTACATAGAGAAACTCTGTCTCAAAACCAA  50

seq1  CCAAACAAAAATCCACCACCAATAAAACATTGCTGCTGTTGTATCCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAAAAATCCACCACCAATAAAACATTGCTGCTGTTGTATCCATGT  100

seq1  GTAATTCTCATTGTTGCCACTCCATACTCTGTACTTGTTGCTAAAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTCATTGTTGCCACTCCATACTCTGTACTTGTTGCTAAAGATGT  150

seq1  AATTTGTGTTTTTTTATGTGAATATAATATCGCTGCCAAGAGTCTAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGTTTTTTTATGTGAATATAATATCGCTGCCAAGAGTCTAAATA  200

seq1  TTTAGGATTATATATTGCATTGTGCCTATTGTCAAACAACCATCCTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATTATATATTGCATTGTGCCTATTGTCAAACAACCATCCTGTAG  250

seq1  AATGATTGACCAGTTCAATGAAATAAATGAATTATTGATTCATAATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGACCAGTTCAATGAAATAAATGAATTATTGATTCATAATTTCT  300

seq1  TTGTTTGGTTATGGTTTTTAGGTTAAAACTTCAACAACAAATTGTGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGTTATGGTTTTTAGGTTAAAACTTCAACAACAAATTGTGAATA  350

seq1  CCGAAAAAGCAGAAAAAGAAAAACTTGAAAATTCTGAACTGAAACAGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAAAAGCAGAAAAAGAAAAACTTGAAAATTCTGAACTGAAACAGGTG  400

seq1  ATTGTAATGCAGTTTGCTTTTATTTTGTTGAATGCTTCTTTTTAGTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAATGCAGTTTGCTTTTATTTTGTTGAATGCTTCTTTTTAGTCTGT  450

seq1  TTTGTGTAGCTTTTGCAGTTAATAATAATTAATACTTTGTAATCTGATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTAGCTTTTGCAGTTAATAATAATTAATACTTTGTAATCTGATCA  500

seq1  CCATAATTCATAATATACTGATGAAGCTGTTATGTAAAGATAAAATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTCATAATATACTGATGAAGCTGTTATGTAAAGATAAAATGTTT  550

seq1  CAAATTTTCTGCTATAATTTAGTAGACTTGCTTTACTTTTGCTGTTTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTTCTGCTATAATTTAGTAGACTTGCTTTACTTTTGCTGTTTACC  600

seq1  TTAATATATTGGTACGTGGTAGCCTTTGACAAATTTTTTGTTATAGTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATATTGGTACGTGGTAGCCTTTGACAAATTTTTTGTTATAGTTAA  650

seq1  AATAACATATTTTGGCATTCTGAATTTTAAAATTAGAAATATTCAGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATATTTTGGCATTCTGAATTTTAAAATTAGAAATATTCAGCTTT  700

seq1  TTAAGTTACACATGTAAAAATATTCTGTGACACGTCATAGGTTTTTGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTACACATGTAAAAATATTCTGTGACACGTCATAGGTTTTTGTTG  750

seq1  TTTTGGTTTTGTTTTCTTGCTGTATTTGTCTAAAATTTAAGAGTTGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTTGTTTTCTTGCTGTATTTGTCTAAAATTTAAGAGTTGTGTT  800

seq1  TATAGGAAGAAAGTTTTATTTTAGTTAAAAGAAATATTTCTATAATGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAAGAAAGTTTTATTTTAGTTAAAAGAAATATTTCTATAATGTAG  850

seq1  GGTAAAGTACACATGAATATTTGTTTCTAAATTCTGTTTTTTCATTTTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGTACACATGAATATTTGTTTCTAAATTCTGTTTTTTCATTTTGC  900

seq1  TTGGGATGTTTCTATTTTCTTAGATTATGAGTAGTGAGGATTCCACTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATGTTTCTATTTTCTTAGATTATGAGTAGTGAGGATTCCACTTAG  950

seq1  AATTTTCCCCATCTGCTGACACTG-CCTTGCACATGCACTTTGAGGACCT  999
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATTTTCCCCATCTGCTGACACTGCCCTTGCACATGCACTTTGAGGACCT  1000

seq1  GAATTGAGAGAGAATAATGCTTGCATGTCAGCTGAAACTGCTTTGTGTGT  1049
      ||||||||||| ||||||||||||||||||||||||||||| ||||||||
seq2  GAATTGAGAGAAAATAATGCTTGCATGTCAGCTGAAACTGC-TTGTGTGT  1049

seq1  G-CACTTATGGAGCCTCAAGTGG-CAGGGCACAGTAC-TCAGACA-CTGT  1095
      | ||||||||||||||||||||| ||||||||||||| ||||||| ||||
seq2  GCCACTTATGGAGCCTCAAGTGGCCAGGGCACAGTACTTCAGACACCTGT  1099

seq1  GGTTT-CGGCTGTCCTA-TGGATCT-AGAGTTAA  1126
      | ||| || |||| ||| ||||||| ||||||||
seq2  GTTTTCCGCCTGTTCTATTGGATCTAAGAGTTAA  1133

seq1: chr10_94371666_94372606
seq2: B6Ng01-289K01.g_70_1025 (reverse)

seq1  ATGGG-AATTTATGAGCGCTTTGCAGT-ATC-TCCAAAAGCAAAATGG-A  46
      ||||| |||| |||||||| ||||||| ||| |||||||||||| ||| |
seq2  ATGGGAAATTAATGAGCGC-TTGCAGTAATCTTCCAAAAGCAAATTGGAA  49

seq1  AAAAAATAT-GCAC-AGACTAAGCCAGACTTCCAGGAGCTTTGCTTTGGT  94
      ||||||||| |||| |||||||||||||||||||| ||||||||| ||||
seq2  AAAAAATATGGCACAAGACTAAGCCAGACTTCCAGAAGCTTTGCTCTGGT  99

seq1  -GGGGGGA-GGGGGTTGGAA-TTTTATCAGCGTTGCGTGGTAGCACAGT-  140
       ||||||| ||||||||||| |||||||||||||||||||||||||||| 
seq2  AGGGGGGAGGGGGGTTGGAATTTTTATCAGCGTTGCGTGGTAGCACAGTC  149

seq1  CAGTACTCTGGCTGGCAGTTTTGAGATGT-CCTTGATAAAT-AAAGCCTG  188
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  CAGTACTCTGGCTGGCAGTTTTGAGATGTCCCTTGATAAATAAAAGCCTG  199

seq1  GGAATGGGAATGGTTACTTCATAAAC-ACAGTTTGTTGAATAGACAAAAG  237
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGAATGGGAATGGTTACTTCATAAACAACAGTTTGTTGAATAGACAAAAG  249

seq1  TCTTTCAAATCTGGGATCCCAGGG-AAGAGACATAACAGTGTTTGACTGA  286
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTTTCAAATCTGGGATCCCAGGGAAAGAGACATAACAGTGTTTGACTGA  299

seq1  GTAGACCGGCGCAGAAGGCCGTGGTGT-AAGCCGAAAAAGGCTAAGGGAG  335
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTAGACCGGCGCAGAAGGCCGTGGTGTAAAGCCGAAAAAGGCTAAGGGAG  349

seq1  AGTCAGATGTGAGACCATC-TTAATGGGATCACTGGATATATCCAACTTT  384
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGTCAGATGTGAGACCATCTTTAATGGGATCACTGGATATATCCAACTTT  399

seq1  CCAAACTGAAAAGAGCAATGTGGCCTTTCTAAGAATACTTGATACTGTCA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTGAAAAGAGCAATGTGGCCTTTCTAAGAATACTTGATACTGTCA  449

seq1  CCCCTAGCCTGTGACTCAAAAAGGCAAGCACACGTAGGACAGTCATTGCT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGCCTGTGACTCAAAAAGGCAAGCACACGTAGGACAGTCATTGCT  499

seq1  CTCCTCCTGAGAGTGGCTAAAAAAGAAGAAGTGACAAATGGGGGGAGGGT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTGAGAGTGGCTAAAAAAGAAGAAGTGACAAATGGGGGGAGGGT  549

seq1  AAGGGCCCCTGTGACATCCATTGTGTAATTATTTAAGTCCCGAATGCCTT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCCCTGTGACATCCATTGTGTAATTATTTAAGTCCCGAATGCCTT  599

seq1  CTTCTTACTTAGTGTGTTCAGAGGGTCATGGATCAAAACTACCAGGCCAG  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTACTTAGTGTGTTCAGAGGGTCATGGATCAAAACTACCAGGCCAG  649

seq1  GATAAAGCATGGGTTCTAGAATCAGGACCGAGTTTGAGTTCTAGCCCTGT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGCATGGGTTCTAGAATCAGGACCGAGTTTGAGTTCTAGCCCTGT  699

seq1  TAAAGACAATACATAGAGATATGTTATATCTGTATCTACATGTAGATATA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACAATACATAGAGATATGTTATATCTGTATCTACATGTAGATATA  749

seq1  CACGTCAGATATATACACACATATCTCCTGGAACTGCTTGCCTTTCCCAG  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCAGATATATACACACATATCTCCTGGAACTGCTTGCCTTTCCCAG  799

seq1  TCTTAGACTGCTCATATATATAAGTGGAGTAATAATTTCATTAACATATT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGACTGCTCATATATATAAGTGGAGTAATAATTTCATTAACATATT  849

seq1  TCATTAGTATTCTTTATTACATGCATGTGTCCACACACACACACACACAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGTATTCTTTATTACATGCATGTGTCCACACACACACACACACAC  899

seq1  AACCCAGTACACATACAGACCCTACAAAACACAATGACTTCCATATTGTA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTACACATACAGACCCTACAAAACACAATGACTTCCATATTGTA  949

seq1  AGAATTC  941
      |||||||
seq2  AGAATTC  956

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information