BAC Information

Click to search

BAC

Clone NameB6Ng01-290F18
Chromosome10 (Build37)
Map Location 16,171,433 - 16,172,542
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439, LOC382457
Downstream geneLOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290F18.bB6Ng01-290F18.g
ACCGA087520GA087521
length1,127987
definitionB6Ng01-290F18.b B6Ng01-290F18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatgaaattaaactagacaacaaatagtccatttctgctgttc
acctggataggacagagtctggtgtgtactccattgtcaagctttacaat
gttttgttttctacactacacgccttggatagatactggtacatatagcc
tataaaatgtttggtaacttagtttcaaattttctcaagagcagaacatt
tatgtaattattttgtccctttacatgagagatttatttgctaacatgtt
ttatattcaagtacctacttgtataggtttgaatttatgtatattttttc
tgtttcttgagcaataaaatactacattatttgagaagggcactgggatg
atctttgtactagtgtgggtcctgtgaaagtggcacagtgtaattttttt
gacttagaactgattaggtaaagcatgctgactccagacttgtggccatc
gtcttacttgggaacacagtcgtgtgcaataagtccaggttataattaaa
tcatttgcatttttgtcattttttagtgagtctgttaagttttaattact
ttatttcccttttttttttttttttttttttttttactgatagccatgat
atgcatataataaacaggatgctgtcttgagacatggaattttctttttt
ttttcttttttctttttccattttttattaggtatttagctcatttacat
ttcttttaaatacaaaaaaatgttccactgtcaaactatataatttttaa
gtttttgtgaatttcttgatttaactatccaatggtctctctgtgatttt
tttttccttaaattgggaaaagttatttagtacccaacaatttcctcatt
agggatgttcatttattctgggatgtctttgcttctttgccctcttagtt
cacaaaagtagaaaaatatttgtgactattcacctccacatgtgtacctc
ataatttgaaatatatcatagctttgttttatctgaattaatcccaaagc
cagcttctacaggaacatataagttcagttttgcttatctgtaaaccttt
caacttcaactattcatcattctgttcaattttaattaattccagcccaa
cataatacaatgtttaaatggttaata
gaattctcacctgaggaatacctaatgactgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggcgacag
ctgatgctggcgaggatgtgaagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctgtcggttcctc
agaaaattggacatagtactactggaggttcccacattacctctcctggg
catatatccagaagatattccaaccagtaagaaggacacattctccacta
tgttcatagaagccatatttataatagccagaagctggaaagaacccaga
tgcccctcaatagaggaatggatatagaaaatgtggtacattttcacaat
ggagtactactcagctattaaaaagaatgaatttagaattgggaacaaaa
cacccatggaaggagttacagagacaaagtttggagctgagatgaaagga
tggacgatgtagagactgccatatccagggatccaccccataatcagcat
ccaaacgctgacaccattgcatatactagcaagattttatcgaaaggacc
cagatgtagctgtctcttgtgagactatgccggggcctagcaaacacaga
agtggatgctcacagtcagctaatggatggatcacagggcccccagtgga
ggagctttagaaagtacccaaggagctaaagggatctgcaaccctacagg
tagaaaaacattatgaactaaccagtaccccggagctcttgactctagct
gcatatgtatcaaaagatagcctagttggccatcactggaaaagagaggc
ccattggacacgcaaactttatatgccccagtacaggggaacgccagggc
caaaaagggtgagcgggtgggttaggggggagttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16171433_16172542
seq2: B6Ng01-290F18.b_47_1173 (reverse)

seq1  TATTAACCATTTTAAACATTGTA-TATGTT-GGCTGGAATTA--TATAAA  46
      ||||||||| ||||||||||||| |||||| |||||||||||  || || 
seq2  TATTAACCA-TTTAAACATTGTATTATGTTGGGCTGGAATTAATTAAAAT  49

seq1  TGAACAG-ATGATGAATAGTTGAAGTTGAA--GGTTACAGATAAGCAAAA  93
      ||||||| ||||||||||||||||||||||  | ||||||||||||||||
seq2  TGAACAGAATGATGAATAGTTGAAGTTGAAAGGTTTACAGATAAGCAAAA  99

seq1  CTGAAACTTATAATGTTCCCTGTAG-AGCTGGCTTT-GGATTAA-TCAGA  140
      ||| ||||||| ||||| ||||||| |||||||||| ||||||| |||||
seq2  CTG-AACTTAT-ATGTT-CCTGTAGAAGCTGGCTTTGGGATTAATTCAGA  146

seq1  TAAA--CAAGCTATGATATATTTC-AATTATGA-GTACACATGTG--AGT  184
      ||||   ||||||||||||||||| |||||||| |||||||||||   ||
seq2  TAAAACAAAGCTATGATATATTTCAAATTATGAGGTACACATGTGGAGGT  196

seq1  GAATAGTCACAAATA-TTTTCTAC-TTTGTGAACTAAGA-GGCAAAGAAG  231
      ||||||||||||||| |||||||| |||||||||||||| ||||||||||
seq2  GAATAGTCACAAATATTTTTCTACTTTTGTGAACTAAGAGGGCAAAGAAG  246

seq1  CAAAGACATCCCAG-ATAAATGAACATCCCTAATGAGGAAATTGTTGGGT  280
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAAAGACATCCCAGAATAAATGAACATCCCTAATGAGGAAATTGTTGGGT  296

seq1  ACT-AATAACTTTTCCCAATTTAAGGAAAAAAAAATCACAGAGAGACCAT  329
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATAACTTTTCCCAATTTAAGGAAAAAAAAATCACAGAGAGACCAT  346

seq1  TGGATAGTTAAATCAAGAAATTCACAAAAACTTAAAAATTATATAGTTTG  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGTTAAATCAAGAAATTCACAAAAACTTAAAAATTATATAGTTTG  396

seq1  ACAGTGGAACATTTTTTTGTATTTAAAAGAAATGTAAATGAGCTAAATAC  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAACATTTTTTTGTATTTAAAAGAAATGTAAATGAGCTAAATAC  446

seq1  CTAATAAAAAATGGAAAAAGAAAAAAGAAAAAAAAAAGAAAATTCCATGT  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAAATGGAAAAAGAAAAAAGAAAAAAAAAAGAAAATTCCATGT  496

seq1  CTCAAGACAGCATCCTGTTTATTATATGCATATCATGGCTATCAGTAAAA  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGACAGCATCCTGTTTATTATATGCATATCATGGCTATCAGTAAAA  546

seq1  AAAAAAAAAAAAAAAAAAAAAAGGGAAATAAAGTAATTAAAACTTAACAG  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAAGGGAAATAAAGTAATTAAAACTTAACAG  596

seq1  ACTCACTAAAAAATGACAAAAATGCAAATGATTTAATTATAACCTGGACT  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTAAAAAATGACAAAAATGCAAATGATTTAATTATAACCTGGACT  646

seq1  TATTGCACACGACTGTGTTCCCAAGTAAGACGATGGCCACAAGTCTGGAG  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCACACGACTGTGTTCCCAAGTAAGACGATGGCCACAAGTCTGGAG  696

seq1  TCAGCATGCTTTACCTAATCAGTTCTAAGTCAAAAAAATTACACTGTGCC  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATGCTTTACCTAATCAGTTCTAAGTCAAAAAAATTACACTGTGCC  746

seq1  ACTTTCACAGGACCCACACTAGTACAAAGATCATCCCAGTGCCCTTCTCA  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCACAGGACCCACACTAGTACAAAGATCATCCCAGTGCCCTTCTCA  796

seq1  AATAATGTAGTATTTTATTGCTCAAGAAACAGAAAAAATATACATAAATT  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTAGTATTTTATTGCTCAAGAAACAGAAAAAATATACATAAATT  846

seq1  CAAACCTATACAAGTAGGTACTTGAATATAAAACATGTTAGCAAATAAAT  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTATACAAGTAGGTACTTGAATATAAAACATGTTAGCAAATAAAT  896

seq1  CTCTCATGTAAAGGGACAAAATAATTACATAAATGTTCTGCTCTTGAGAA  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGTAAAGGGACAAAATAATTACATAAATGTTCTGCTCTTGAGAA  946

seq1  AATTTGAAACTAAGTTACCAAACATTTTATAGGCTATATGTACCAGTATC  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAAACTAAGTTACCAAACATTTTATAGGCTATATGTACCAGTATC  996

seq1  TATCCAAGGCGTGTAGTGTAGAAAACAAAACATTGTAAAGCTTGACAATG  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAGGCGTGTAGTGTAGAAAACAAAACATTGTAAAGCTTGACAATG  1046

seq1  GAGTACACACCAGACTCTGTCCTATCCAGGTGAACAGCAGAAATGGACTA  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACACACCAGACTCTGTCCTATCCAGGTGAACAGCAGAAATGGACTA  1096

seq1  TTTGTTGTCTAGTTTAATTTCATGAGAATTC  1110
      |||||||||||||||||||||||||||||||
seq2  TTTGTTGTCTAGTTTAATTTCATGAGAATTC  1127