BAC Information

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BAC

Clone NameB6Ng01-290G05
Chromosome10 (Build37)
Map Location 16,228,729 - 16,229,808
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC637043, LOC100039492, LOC671439, LOC382457
Downstream geneLOC546472, LOC100039576, LOC627511
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290G05.bB6Ng01-290G05.g
ACCGA087542GA087543
length1,1811,075
definitionB6Ng01-290G05.b B6Ng01-290G05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacttctgtacaatattttttaatagggttatttggct
ccctggagtttaacttcttgtgttctttgtatatattagatattagcttt
caatcggatgtagggttggtaaggatcttttcccaatctcttggttcctg
ttttgtcccattgacagtgtcctttgccttacagaagctttatagtctta
tgaggtcctatttgtcaaaacttgatcttagagcataagccattggtgtt
ctcttcaggaaaatttctcctgtgcccatgtgtttgaagctcttttccac
tttctcttctagtagtttccgtgtatctggttttacatggagttccttga
tccacttggactttagttttgtgcaaggacataagaatagatcaatttgc
actcttctacattatgactgccagttgaatgagcaccattgttgaaaata
cagtcttttttccactagatggttttaacacctttgtcaaagataaagtt
accatagatgtacatgttcatttctggatcttcaattatgtttcattgat
ctacctgcctgtctctgtaccaatatcttgcagttcttatcactattgct
ctataatacagcttgaggtctaggatgatgattcccccagaagttctttt
attgttgagaacagttttcactttcctgggttttttgttattctagatga
atttccaaattgctctttctaacactactaaggactgatttggaattttg
atggggatagcatgaaatctgttgattgtttttgacaagacagccatttt
tactataataaaacaatccatgagcctgggagatatttccaactttgaga
tcttcttcaatttctttcttcagagacttgaagttcttgtcatacagatc
tttcacttgcttagttagattcacaccaaaggcattttattttatttttg
actattgtgaatggtgtcatttccctaatttctttctcagctgtttatcc
tttgagtaaggaaagcactgatgtgttgacttaatttttattatcagcag
ctggctgaagttgttttgtcagctctagagatctcttgggtggaattttg
gctcacttaatgttatacctatcatcacttgcaaatttggaatattttga
cctccctatacgtgtcgccaagttccgtatc

gaattccttctactttatatataccatttacagctatctaaattaactaa
aattatgtgtatatgattaggtatttaaaccacagaaaaatcaaagtatg
aataattattctgatatttataattcaataaataaaatcaataaataaaa
ttagatgcttaaatcaggctacatttaataagtgataagtgaattattat
aagtaacttttggcaattactaaatatccaataaagtatgaatgatataa
atgattgctatgttttctgtgtatgaacaccaaatgtgaaaactatatgg
ctcacggatttcactccaattaagagaaacaacattgcattgtaagtttt
taaaatttccaatgttaaaagaatatacaaaatgacatatcttgaaatga
tacaagtattaactaagttcccagaaatatgtttaagtacacatgtaata
aaataaaaataaaataaaaagtaagataaaactcggttagtgacattcag
ggaaaaaaaaaaaaaaaagcagtgcctatgtttaattgtacagggaaaaa
gaccaagataaactaaggcatcattttatcaggaaccacagtaacaatgg
agatcatctttctcatctcccatgatagacagcttgtcaatttcattcac
tacaaaatggcttctcaaggttatatttttccacttctagatttatattt
tatatttcaaggcaaaattatattctgaaacaagagaagtacaaaaattg
gctccattccatgcaatgatcattgataaatgcattatatatacatatat
tcctatataattatgtattattaacattaaatcaatgtgcatttatgtac
caagggttgtcctgagacttctatgcaattcactgaaagatcctcatgaa
aattttactttaatagacaccagaaaatggcaggtaaagatgtctacctg
acacatgaatttgattgctggattcatctggccaaagagtgatgacttct
ataatttctttgtgactccaccatcatgctgtgacataatttggtacccc
ccacactaaccattctatacgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_16228729_16229808
seq2: B6Ng01-290G05.g_66_1140

seq1  GAATTCCTTCTACTTTATATATACCATTTACAGCTATCTAAATTAACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCTACTTTATATATACCATTTACAGCTATCTAAATTAACTAA  50

seq1  AATTATGTGTATATGATTAGGTATTTAAACCACAGAAAAATCAAAGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTGTATATGATTAGGTATTTAAACCACAGAAAAATCAAAGTATG  100

seq1  AATAATTATTCTGATATTTATAATTCAATAAATAAAATCAATAAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTATTCTGATATTTATAATTCAATAAATAAAATCAATAAATAAAA  150

seq1  TTAGATGCTTAAATCAGGCTACATTTAATAAGTGATAAGTGAATTATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGCTTAAATCAGGCTACATTTAATAAGTGATAAGTGAATTATTAT  200

seq1  AAGTAACTTTTGGCAATTACTAAATATCCAATAAAGTATGAATGATATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACTTTTGGCAATTACTAAATATCCAATAAAGTATGAATGATATAA  250

seq1  ATGATTGCTATGTTTTCTGTGTATGAACACCAAATGTGAAAACTATATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGCTATGTTTTCTGTGTATGAACACCAAATGTGAAAACTATATGG  300

seq1  CTCACGGATTTCACTCCAATTAAGAGAAACAACATTGCATTGTAAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGGATTTCACTCCAATTAAGAGAAACAACATTGCATTGTAAGTTTT  350

seq1  TAAAATTTCCAATGTTAAAAGAATATACAAAATGACATATCTTGAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTCCAATGTTAAAAGAATATACAAAATGACATATCTTGAAATGA  400

seq1  TACAAGTATTAACTAAGTTCCCAGAAATATGTTTAAGTACACATGTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTATTAACTAAGTTCCCAGAAATATGTTTAAGTACACATGTAATA  450

seq1  AAATAAAAATAAAATAAAAAGTAAGATAAAACTCGGTTAGTGACATTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAATAAAATAAAAAGTAAGATAAAACTCGGTTAGTGACATTCAG  500

seq1  GGAAAAAAAAAAAAAAAAGCAGTGCCTATGTTTAATTGTACAGGGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAAAAAAAAAAGCAGTGCCTATGTTTAATTGTACAGGGAAAAA  550

seq1  GACCAAGATAAACTAAGGCATCATTTTATCAGGAACCACAGTAACAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGATAAACTAAGGCATCATTTTATCAGGAACCACAGTAACAATGG  600

seq1  AGATCATCTTTCTCATCTCCCATGATAGACAGCTTGTCAATTTCATTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATCTTTCTCATCTCCCATGATAGACAGCTTGTCAATTTCATTCAC  650

seq1  TACAAAATGGCTTCTCAAGGTTATATTTTTCCACTTCTAGATTTATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATGGCTTCTCAAGGTTATATTTTTCCACTTCTAGATTTATATTT  700

seq1  TATATTTCAAGGCAAAATTATATTCTGAAACAAGAGAAGTACAAAAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCAAGGCAAAATTATATTCTGAAACAAGAGAAGTACAAAAATTG  750

seq1  GCTCCATTCCATGCAATGATCATTGATAAATGCATTATATATACATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATTCCATGCAATGATCATTGATAAATGCATTATATATACATATAT  800

seq1  TCCTATATAATTATGTATTATTAACATTAAATCAATGTGCATTTATGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATAATTATGTATTATTAACATTAAATCAATGTGCATTTATGTAC  850

seq1  CAAGGGTTGTCCTGAGACTTCTATGCAATTCACTGAAAGATCCTCATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTTGTCCTGAGACTTCTATGCAATTCACTGAAAGATCCTCATGAA  900

seq1  AATTTTAC-TTAATAGACACCAGAAAAATGGCAGGTAAAGATGTCTACCT  949
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  AATTTTACTTTAATAGACACCAG-AAAATGGCAGGTAAAGATGTCTACCT  949

seq1  GACAACATGAATTTGATTGCTGGGATTCATCTGGCAAAAGGAGTGAATTG  999
      ||| ||||||||||||||||| ||||||||||||| ||| ||||||  ||
seq2  GAC-ACATGAATTTGATTGCT-GGATTCATCTGGCCAAA-GAGTGA--TG  994

seq1  ACTTCTATTAATTTCTTTGTGACTTCAACATTCATGCTGTGACATA--TT  1047
      ||||||| |||||||||||||||| || || |||||||||||||||  ||
seq2  ACTTCTA-TAATTTCTTTGTGACTCCACCA-TCATGCTGTGACATAATTT  1042

seq1  TGTA-CCCCCACACTTACCCATCTATACAGAAAA  1080
       ||| |||||||||| |||  ||||||| |||||
seq2  GGTACCCCCCACACTAACCATTCTATAC-GAAAA  1075


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