BAC Information

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BAC

Clone NameB6Ng01-292A14
Chromosome10 (Build37)
Map Location 92,684,551 - 92,870,533
singlet/doubletdoublet
Overlap genePctk2, Elk3, LOC100041854
Upstream geneLOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik, EG667314
Downstream geneLta4h, Hal, Amdhd1, Ccdc38, Snrpf, LOC100041873, Ntn4, LOC667338, LOC100041907, Usp44, Metap2, Vezt, Fgd6, Nr2c1, Ndufa12, EG215472, LOC100041955
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292A14.bB6Ng01-292A14.g
ACCGA088776GA088777
length8941,122
definitionB6Ng01-292A14.b B6Ng01-292A14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,869,685 - 92,870,533)(92,684,551 - 92,686,650)
sequence
gaattctctgtttagctctgttccccatttttaatagggttatttggttc
tctggagtctaacttcttgagttctttgtatatattggatattaaccctc
tagcagatgtaagattggtaaaggtcttttcccaatctgttggttgtcga
tttgccctgttgacagtgtcctttgccttacagaagctttgcaattttat
gaggtcccatttgttgattcttgatcttagagcataaggcattggtgttc
tgttcaggaacttttctcctgactcacttttgagagacaaaggattcact
ctggcctgaggattcctgaggtccactggcatgctttgctcctctcgggg
ataatgactttttaaaagttagaacaaggggctggagaaatggctcagct
gttaagagtacttactggcccagcagtggtggtgcatacctttaatccca
gcacttggaaggcagaggcagaggcagaggcagaggcagaggcagaggca
gaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcaga
ggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcagagg
cagaggcagaggcagaggcagaggcagaggcagaggcaggcggatttctg
aatttgaggccagtttggtctacagagtgagttccaggacagctggggtt
acacagagaaaccctgtctcgaaaaaccaaaaccaaaccaaaccaaacca
accaaacccaaaaccccaacaacaacaagaacaacaccaacccaatccaa
acaaccaacaacaaaacccaacccccccaaaaaagagtacttactgctct
tcagagtgcggagcctcagttgctaccactcacatgctggctca
gaattctggaatgaccactattacctaaaagactatataccgaattctga
aatgatcgctattacctaaaagattatatacctgactctgaaatgaccgc
tgtgagctaaaagactatatactgaattctggaatgaccactattatcta
aaagattatataccaaattctgaaatgaccactgttacctaaaagagtat
atacctgactctgaaatgaccgctattacttaaaagaatgaatatatata
tactgaattttgcaatgaccactattacctaaaagattatatacctgtct
ctgaaatgacaattacctaacagactatataccgaattttgagatgactg
ctattacctaaaagagtatatactgaattctgagataaccactattacct
aagagattatataccaaattctgaaatgaccgctgttacctaaaatatga
tataccaaattctgcaatgaccactattacctaagagattatttaccgaa
ttctgaaatgaccgctattacctaaaagagtatatacctgactctgaaat
gaccgctattacttaaaagtatatatatatatatacttaaaagtatatat
atatatatatatatatatatatatatatatatatactgaattctgcaatg
accactattacctaaaagattatatacctgtctctgaaatgactattacc
taacagactatataccgaattttgagatgactgctattacctaaaagagt
atatactgaattctgagataaccgctattacctaagagattatataccaa
attctgaaatgaccgctgttacctaaaatataatataccaaattttgcaa
tgaccactattacctaagagattatttacccgaattctgaaatgactgct
attacctaaaaagaatatacacctgactctgaaatgaccgctattactta
aaaggaatatatatatatactggaattctacaatggaccactattaccta
aaaagaatttattataccttgtctcttggaaatgacttataccctaacag
actatatactgattttttggagatgaccactataccttaaaggactatta
tatcgaatttctggaaatgacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_92869685_92870533
seq2: B6Ng01-292A14.b_46_898 (reverse)

seq1  TGAAGAGCAGTAAGTACTCTTTTTTTGGGGGGGGTTGGGTTTTGTTGTTG  50
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  TGAAGAGCAGTAAGTACTCTTTTTT--GGGGGGGTTGGGTTTTGTTGTTG  48

seq1  TTGTTTTGGATTGGTTTGGTGTTGTTCTTGTTGTTGTTGGGGTTTTGGTT  100
       |  |||||||||| ||||||||||||||||||||||||||||||||| |
seq2  GTTGTTTGGATTGGGTTGGTGTTGTTCTTGTTGTTGTTGGGGTTTTGGGT  98

seq1  TGGTTTGGTTTGGTTTGGTTTGGTTTTGGTTTTTCGAGACAGGGTTTCTC  150
      | | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTGGTTTGGTTTGGTTTGGTTTTGGTTTTTCGAGACAGGGTTTCTC  148

seq1  TGTGTAACCCCAGCTGTCCTGGAACTCACTCTGTAGACCAAACTGGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAACCCCAGCTGTCCTGGAACTCACTCTGTAGACCAAACTGGCCTC  198

seq1  AAATTCAGAAATCCGC------CTGCCTCTGCCTCTGCCTCTGCCTCTGC  244
      ||||||||||||||||      ||||||||||||||||||||||||||||
seq2  AAATTCAGAAATCCGCCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGC  248

seq1  CTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCT  298

seq1  CTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCT  348

seq1  GCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTTCCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTTCCA  398

seq1  AGTGCTGGGATTAAAGGTATGCACCACCACTGCTGGGCCAGTAAGTACTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGATTAAAGGTATGCACCACCACTGCTGGGCCAGTAAGTACTC  448

seq1  TTAACAGCTGAGCCATTTCTCCAGCCCCTTGTTCTAACTTTTAAAAAGTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCTGAGCCATTTCTCCAGCCCCTTGTTCTAACTTTTAAAAAGTC  498

seq1  ATTATCCCCGAGAGGAGCAAAGCATGCCAGTGGACCTCAGGAATCCTCAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCCCGAGAGGAGCAAAGCATGCCAGTGGACCTCAGGAATCCTCAG  548

seq1  GCCAGAGTGAATCCTTTGTCTCTCAAAAGTGAGTCAGGAGAAAAGTTCCT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTGAATCCTTTGTCTCTCAAAAGTGAGTCAGGAGAAAAGTTCCT  598

seq1  GAACAGAACACCAATGCCTTATGCTCTAAGATCAAGAATCAACAAATGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAACACCAATGCCTTATGCTCTAAGATCAAGAATCAACAAATGGG  648

seq1  ACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAACAGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATAAAATTGCAAAGCTTCTGTAAGGCAAAGGACACTGTCAACAGG  698

seq1  GCAAATCGACAACCAACAGATTGGGAAAAGACCTTTACCAATCTTACATC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCGACAACCAACAGATTGGGAAAAGACCTTTACCAATCTTACATC  748

seq1  TGCTAGAGGGTTAATATCCAATATATACAAAGAACTCAAGAAGTTAGACT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGGGTTAATATCCAATATATACAAAGAACTCAAGAAGTTAGACT  798

seq1  CCAGAGAACCAAATAACCCTATTAAAAATGGGGAACAGAGCTAAACAGAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAACCAAATAACCCTATTAAAAATGGGGAACAGAGCTAAACAGAG  848

seq1  AATTC  849
      |||||
seq2  AATTC  853

seq1: chr10_92684551_92686650
seq2: B6Ng01-292A14.g_64_1185

seq1  GAATTCTGGAATGACCACTATTACCTAAAAGACTATATACCGAATTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAATGACCACTATTACCTAAAAGACTATATACCGAATTCTGA  50

seq1  AATGATCGCTATTACCTAAAAGATTATATACCTGACTCTGAAATGACCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCGCTATTACCTAAAAGATTATATACCTGACTCTGAAATGACCGC  100

seq1  TGTGAGCTAAAAGACTATATACTGAATTCTGGAATGACCACTATTATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTAAAAGACTATATACTGAATTCTGGAATGACCACTATTATCTA  150

seq1  AAAGATTATATACCAAATTCTGAAATGACCACTGTTACCTAAAAGAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTATATACCAAATTCTGAAATGACCACTGTTACCTAAAAGAGTAT  200

seq1  ATACCTGACTCTGAAATGACCGCTATTACTTAAAAGAATGAATATATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTGACTCTGAAATGACCGCTATTACTTAAAAGAATGAATATATATA  250

seq1  TACTGAATTTTGCAATGACCACTATTACCTAAAAGATTATATACCTGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAATTTTGCAATGACCACTATTACCTAAAAGATTATATACCTGTCT  300

seq1  CTGAAATGACAATTACCTAACAGACTATATACCGAATTTTGAGATGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATGACAATTACCTAACAGACTATATACCGAATTTTGAGATGACTG  350

seq1  CTATTACCTAAAAGAGTATATACTGAATTCTGAGATAACCACTATTACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACCTAAAAGAGTATATACTGAATTCTGAGATAACCACTATTACCT  400

seq1  AAGAGATTATATACCAAATTCTGAAATGACCGCTGTTACCTAAAATATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATTATATACCAAATTCTGAAATGACCGCTGTTACCTAAAATATGA  450

seq1  TATACCAAATTCTGCAATGACCACTATTACCTAAGAGATTATTTACCGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAAATTCTGCAATGACCACTATTACCTAAGAGATTATTTACCGAA  500

seq1  TTCTGAAATGACCGCTATTACCTAAAAGAGTATATACCTGACTCTGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAATGACCGCTATTACCTAAAAGAGTATATACCTGACTCTGAAAT  550

seq1  GACCGCTATTACTTAAAAGTATATATATATATATACTTAAAAGTATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGCTATTACTTAAAAGTATATATATATATATACTTAAAAGTATATAT  600

seq1  ATATATATATATATATATATATATATATATATATACTGAATTCTGCAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATACTGAATTCTGCAATG  650

seq1  ACCACTATTACCTAAAAGATTATATACCTGTCTCTGAAATGACTATTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTATTACCTAAAAGATTATATACCTGTCTCTGAAATGACTATTACC  700

seq1  TAACAGACTATATACCGAATTTTGAGATGACTGCTATTACCTAAAAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGACTATATACCGAATTTTGAGATGACTGCTATTACCTAAAAGAGT  750

seq1  ATATACTGAATTCTGAGATAACCGCTATTACCTAAGAGATTATATACCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGAATTCTGAGATAACCGCTATTACCTAAGAGATTATATACCAA  800

seq1  ATTCTGAAATGACCGCTGTTACCTAAAATATAATATACCAAATTTTGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAAATGACCGCTGTTACCTAAAATATAATATACCAAATTTTGCAA  850

seq1  TGACCACTATTACCTAAGAGATTATTTA-CCGAATTCTGAAATGACTGCT  899
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGACCACTATTACCTAAGAGATTATTTACCCGAATTCTGAAATGACTGCT  900

seq1  ATTACCT-AAAAGAATATACACCTGACTCTGAAATGACCGCTATTACTTA  948
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTAAAAAGAATATACACCTGACTCTGAAATGACCGCTATTACTTA  950

seq1  AAA-GAATATATATATATACT-GAATTCTACAAT-GACCACTATTACCT-  994
      ||| ||||||||||||||||| |||||||||||| |||||||||||||| 
seq2  AAAGGAATATATATATATACTGGAATTCTACAATGGACCACTATTACCTA  1000

seq1  AAAAGA--TTA-TATACC-TGTCTCT--GAAATGAC-TATTACCTAACAG  1037
      ||||||  ||| |||||| |||||||  |||||||| |||  ||||||||
seq2  AAAAGAATTTATTATACCTTGTCTCTTGGAAATGACTTATACCCTAACAG  1050

seq1  ACTATATACTGAATTTT--GAGATGACCACTATTACCTAAAAGACTA-TA  1084
      |||||||||||| ||||  ||||||||||||||  | |||| ||||| ||
seq2  ACTATATACTGATTTTTTGGAGATGACCACTATACCTTAAAGGACTATTA  1100

seq1  TACCGAA-TTCT-GAAATGA-CTGCTATTGCCTAAAAGAGTATATACCTG  1131
      || |||| |||| ||||||| |                            
seq2  TATCGAATTTCTGGAAATGACC----------------------------  1122

seq1  ACTCTGAAATGACCGCTATTACTTAAAAGAATATATATGTGTATATATAT  1181
                                                        
seq2  --------------------------------------------------  1122

seq1  ATATATATATATGTATGTATGTATGTATGCTGAATTCTGCAATGACCACT  1231
                                                        
seq2  --------------------------------------------------  1122

seq1  ATTACCTAAAAGATTATATACCTGTCTCTGAAATGACTATTACCTAACAG  1281
                                                        
seq2  --------------------------------------------------  1122

seq1  ACTATATACTGAATTTTGAGATGACCGCTATTACCTAAAGACTATATACC  1331
                                                        
seq2  --------------------------------------------------  1122

seq1  AAATTTTGAGATGACTGCTATTACCTAAGAGATTATATTCTGAATTCTGA  1381
                                                        
seq2  --------------------------------------------------  1122

seq1  AATGACCACTGTTACCTAAAATATCATATACCAAATTTTGCAGTGACCAC  1431
                                                        
seq2  --------------------------------------------------  1122

seq1  TATTACCTAAGAGATTATTTACCGAATTCTGAAATGACCGCTATTACCTA  1481
                                                        
seq2  --------------------------------------------------  1122

seq1  AAAGAGTATATACCTGTCTCTGAAATGACTATTACCTAAAAGACTATATA  1531
                                                        
seq2  --------------------------------------------------  1122

seq1  CCGAATTTTGAGATGGCCACTATTACCTAAAAGACTATATACCGAATTTT  1581
                                                        
seq2  --------------------------------------------------  1122

seq1  GAGATGACCACTATTACCTAACAGACTATATACCGAATTTTGAGATGACC  1631
                                                        
seq2  --------------------------------------------------  1122

seq1  GCTATTACCTAAAGACTATATACCGAATTTTGAGATGACTGCTATTACCT  1681
                                                        
seq2  --------------------------------------------------  1122

seq1  AAGAGATTATATTCTGAATTCTGAAATGACCGCTGTTACCTAAAATATCA  1731
                                                        
seq2  --------------------------------------------------  1122

seq1  TATACCAAATTCTGCAATGACCACTATTACCTACGAGATTATTTACCGAA  1781
                                                        
seq2  --------------------------------------------------  1122

seq1  TTCTGAAATGGCCGCTATTACCTAAAAGAGTATATACCTGACTCTGAAAT  1831
                                                        
seq2  --------------------------------------------------  1122

seq1  GACTGCTAGTACCTAAAAGTATATAGCTGACTCTGAAATGGCCACTATTA  1881
                                                        
seq2  --------------------------------------------------  1122

seq1  CTTAAAAGAATATATATATATATATATATATATATATATACTGAATTCTG  1931
                                                        
seq2  --------------------------------------------------  1122

seq1  CAATGACCACTATTACCTAAAAGATTATATACCTGTCTCTGAAATGACAA  1981
                                                        
seq2  --------------------------------------------------  1122

seq1  TTACCTAACAGACTATATACTGAATTTTGAGATGACTGCTATTACCTAAA  2031
                                                        
seq2  --------------------------------------------------  1122

seq1  AGACTATATACTGAATTCTGAGATGACCGCTATTACCTAAGAGATTATAT  2081
                                                        
seq2  --------------------------------------------------  1122

seq1  ACCAAATTCTGAAATGACC  2100
                         
seq2  -------------------  1122