BAC Information

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BAC

Clone NameB6Ng01-292F23
Chromosome10 (Build37)
Map Location 87,442,800 - 87,552,007
singlet/doubletdoublet
Overlap genenone
Upstream geneStab2, 1700113H08Rik, Ascl1, Pah, LOC100041517, ENSMUSG00000058934, Igf1, Tyms-ps
Downstream genePmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab, Sycp3, Chpt1, 8030451F13Rik, LOC667046, LOC627414, LOC100042998, EG435236, Spic, EG237433, Arl1, Utp20, Slc5a8, Tmem16d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292F23.bB6Ng01-292F23.g
ACCGA089031GA089032
length1,181943
definitionB6Ng01-292F23.b B6Ng01-292F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,550,817 - 87,552,007)(87,442,800 - 87,443,566)
sequence
gaattcttcaccctgctgtcagatcaattgccttatctatttatattttt
atgtctagtaaatgaagcctatcagcatctcatcagccattcatttctct
taagcagttccttggcaattcttggacaattcttagttcaaaagcatgcg
gcttcccataggactttctctgaagacacactaacccagactcccagcaa
gtgttgaaatggagggagcagacatctttgcagggtaatgattttataga
ggataataacactttatcctggagagcaaccttagacctcctgtctactg
tctaaatggcaggagattcctatttctgccttactgatagctttaccacc
atttgttggattttattgaatacttaatactatatgtattttagaaatgg
tgatataattttctttagtttttagtaagctaatagattgtttctagtat
tgaagttttcatatgcctgtaaaacaaatcttttatttatattcaacttg
gaaatatttcattcagtaatattaaattattaccatgaatgtgatttata
cgttctctttttaatattgaatttgtctgagtttgacattagattataat
aatttcataagatgtaatgagagagagcctattcctttactgttgatcta
tttgggtgtgggattctcttgataggatttaatttttttcatctatagat
aggtatttactttttacttttttgtttaaagaattcacattctatgacat
atgcaatgtaaaatttatcagatagacatagttaatgccaaatcacttgg
ggctaccaagatcaaaataggcaagtgtttcctgatgtctttgttcttaa
gagagtgcttatctatgtttttttgttgttgtttgtttgcttgcttttaa
tcttcttaatgccgttagtcgtggcctagtttgttttctagcattgaaaa
ccttctatggaggtgtgtgcaatttatagaaatgcttgttaatactaacc
ttttccttttctcttagttgcagtcttgggctaataataaatattaataa
ttattgtaatgtgtctaagttccactggggtgaattattttggctaggct
tctcttaagaattgggttcgatcaatcaattcgtgacggttaaattaggg
ttcttatttgtgactgttctagcgtttctaa
gaattctttttataggggctaaagaagcatgtagatgcattaaaatcagt
tggtagtaccttgaagtgccttaaaaagttacaatctttttttaaataag
ggacagaatcattaagcaaaggaaccactaggggccagaaggcacccagt
gcaaggcacaaccaacaatcattggcccgtgatagattagagaaatttag
ggtgacatgtgtagctgcaaggatatcagaggtttgggggtccacatcaa
tgccttttggtttgggcaatgtgatggtttgtatattcttggaccaggga
gtggcaccatttggaggtgtggtcttgttggaatatgtgtgacctggttg
aagtaggtgtgtcaatgggtgtgggcttaagactctcacaccagttgcct
ggaagtcagtcttccactagcagcctttggatgaagacgtagaactctca
gctctgcatgcaccatgatagcctggatgctgccatgctcccaccttgat
gataatggactgaacctctgaacctgtaagctagctccaatgaaatgttg
ttctttataagacttgccttggtcacggtgtctgttcacagcagtaaaac
cctaactaagacagaagttggtgccagggactggggtattgctgtgatag
gcctgatgatgctttgatttgaaagtgtgaatttttggtctttggatttg
gaattcagtggaatgctttaaatggggcttaatgggtcatcctagtagga
atatggaagtctttgttgctgggagtaatttgaactgtgttgacctggcc
caagagatttcaaaggagaagaatttcagtatgtggcataagactgtttt
ttgtgggtatttggtgaagaatgtggctactttttgccctttgtctgaaa
agtctgcctgagctaaagtgaagagacttgaattaatttgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_87550817_87552007
seq2: B6Ng01-292F23.b_47_1227 (reverse)

seq1  TTAGAA--GCTAGAACAGTTTAAACAAAATAAAGGAAAACACTAATTTTT  48
      ||||||  |||||||||||     || ||  |||   ||| |||||||  
seq2  TTAGAAACGCTAGAACAGT-----CACAAATAAG---AACCCTAATTT--  40

seq1  TAAACTGTCA-GAATGGTTTGGATTTGACCCCAATCTTAGAGGAAGCCTA  97
        ||| |||| |||| | || |||   |||| | |||||   ||||||||
seq2  --AACCGTCACGAATTGATT-GATCGAACCCAATTCTTAAGAGAAGCCTA  87

seq1  GCCAAAATAATTCA-CCCAGTGGAAACTTAGAACACAATAC-ATAATTAT  145
      |||||||||||||| |||||||| ||||||| ||||| ||| ||||||||
seq2  GCCAAAATAATTCACCCCAGTGG-AACTTAG-ACACATTACAATAATTAT  135

seq1  TAATATTTATTA-TAGCCCAAGACTGCAACTAAGAAGAAAAGGAAAAGGT  194
      |||||||||||| ||||||||||||||||||||| |||||||||||||||
seq2  TAATATTTATTATTAGCCCAAGACTGCAACTAAG-AGAAAAGGAAAAGGT  184

seq1  TAGTATTAACAAGCATTTCTATAAATTGCACACACCTCCATAGAAGGTTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTAACAAGCATTTCTATAAATTGCACACACCTCCATAGAAGGTTT  234

seq1  TCAATGCTAGAAAACAAACTAGGCCACGACTAACGGCATTAAGAAGATTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGCTAGAAAACAAACTAGGCCACGACTAACGGCATTAAGAAGATTA  284

seq1  AAAGCAAGCAAACAAACAACAACAAAAAAACATAGATAAGCACTCTCTTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGCAAACAAACAACAACAAAAAAACATAGATAAGCACTCTCTTA  334

seq1  AGAACAAAGACATCAGGAAACACTTGCCTATTTTGATCTTGGTAGCCCCA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAGACATCAGGAAACACTTGCCTATTTTGATCTTGGTAGCCCCA  384

seq1  AGTGATTTGGCATTAACTATGTCTATCTGATAAATTTTACATTGCATATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTGGCATTAACTATGTCTATCTGATAAATTTTACATTGCATATG  434

seq1  TCATAGAATGTGAATTCTTTAAACAAAAAAGTAAAAAGTAAATACCTATC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAATGTGAATTCTTTAAACAAAAAAGTAAAAAGTAAATACCTATC  484

seq1  TATAGATGAAAAAAATTAAATCCTATCAAGAGAATCCCACACCCAAATAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATGAAAAAAATTAAATCCTATCAAGAGAATCCCACACCCAAATAG  534

seq1  ATCAACAGTAAAGGAATAGGCTCTCTCTCATTACATCTTATGAAATTATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAGTAAAGGAATAGGCTCTCTCTCATTACATCTTATGAAATTATT  584

seq1  ATAATCTAATGTCAAACTCAGACAAATTCAATATTAAAAAGAGAACGTAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTAATGTCAAACTCAGACAAATTCAATATTAAAAAGAGAACGTAT  634

seq1  AAATCACATTCATGGTAATAATTTAATATTACTGAATGAAATATTTCCAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACATTCATGGTAATAATTTAATATTACTGAATGAAATATTTCCAA  684

seq1  GTTGAATATAAATAAAAGATTTGTTTTACAGGCATATGAAAACTTCAATA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATATAAATAAAAGATTTGTTTTACAGGCATATGAAAACTTCAATA  734

seq1  CTAGAAACAATCTATTAGCTTACTAAAAACTAAAGAAAATTATATCACCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAACAATCTATTAGCTTACTAAAAACTAAAGAAAATTATATCACCA  784

seq1  TTTCTAAAATACATATAGTATTAAGTATTCAATAAAATCCAACAAATGGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAATACATATAGTATTAAGTATTCAATAAAATCCAACAAATGGT  834

seq1  GGTAAAGCTATCAGTAAGGCAGAAATAGGAATCTCCTGCCATTTAGACAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGCTATCAGTAAGGCAGAAATAGGAATCTCCTGCCATTTAGACAG  884

seq1  TAGACAGGAGGTCTAAGGTTGCTCTCCAGGATAAAGTGTTATTATCCTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGGAGGTCTAAGGTTGCTCTCCAGGATAAAGTGTTATTATCCTCT  934

seq1  ATAAAATCATTACCCTGCAAAGATGTCTGCTCCCTCCATTTCAACACTTG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCATTACCCTGCAAAGATGTCTGCTCCCTCCATTTCAACACTTG  984

seq1  CTGGGAGTCTGGGTTAGTGTGTCTTCAGAGAAAGTCCTATGGGAAGCCGC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGTCTGGGTTAGTGTGTCTTCAGAGAAAGTCCTATGGGAAGCCGC  1034

seq1  ATGCTTTTGAACTAAGAATTGTCCAAGAATTGCCAAGGAACTGCTTAAGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTGAACTAAGAATTGTCCAAGAATTGCCAAGGAACTGCTTAAGA  1084

seq1  GAAATGAATGGCTGATGAGATGCTGATAGGCTTCATTTACTAGACATAAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAATGGCTGATGAGATGCTGATAGGCTTCATTTACTAGACATAAA  1134

seq1  AATATAAATAGATAAGGCAATTGATCTGACAGCAGGGTGAAGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAATAGATAAGGCAATTGATCTGACAGCAGGGTGAAGAATTC  1181

seq1: chr10_87442800_87443566
seq2: B6Ng01-292F23.g_64_830

seq1  GAATTCTTTTTATAGGGGCTAAAGAAGCATGTAGATGCATTAAAATCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTATAGGGGCTAAAGAAGCATGTAGATGCATTAAAATCAGT  50

seq1  TGGTAGTACCTTGAAGTGCCTTAAAAAGTTACAATCTTTTTTTAAATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTACCTTGAAGTGCCTTAAAAAGTTACAATCTTTTTTTAAATAAG  100

seq1  GGACAGAATCATTAAGCAAAGGAACCACTAGGGGCCAGAAGGCACCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAATCATTAAGCAAAGGAACCACTAGGGGCCAGAAGGCACCCAGT  150

seq1  GCAAGGCACAACCAACAATCATTGGCCCGTGATAGATTAGAGAAATTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCACAACCAACAATCATTGGCCCGTGATAGATTAGAGAAATTTAG  200

seq1  GGTGACATGTGTAGCTGCAAGGATATCAGAGGTTTGGGGGTCCACATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACATGTGTAGCTGCAAGGATATCAGAGGTTTGGGGGTCCACATCAA  250

seq1  TGCCTTTTGGTTTGGGCAATGTGATGGTTTGTATATTCTTGGACCAGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTGGTTTGGGCAATGTGATGGTTTGTATATTCTTGGACCAGGGA  300

seq1  GTGGCACCATTTGGAGGTGTGGTCTTGTTGGAATATGTGTGACCTGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACCATTTGGAGGTGTGGTCTTGTTGGAATATGTGTGACCTGGTTG  350

seq1  AAGTAGGTGTGTCAATGGGTGTGGGCTTAAGACTCTCACACCAGTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGTGTGTCAATGGGTGTGGGCTTAAGACTCTCACACCAGTTGCCT  400

seq1  GGAAGTCAGTCTTCCACTAGCAGCCTTTGGATGAAGACGTAGAACTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCAGTCTTCCACTAGCAGCCTTTGGATGAAGACGTAGAACTCTCA  450

seq1  GCTCTGCATGCACCATGATAGCCTGGATGCTGCCATGCTCCCACCTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCATGCACCATGATAGCCTGGATGCTGCCATGCTCCCACCTTGAT  500

seq1  GATAATGGACTGAACCTCTGAACCTGTAAGCTAGCTCCAATGAAATGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGGACTGAACCTCTGAACCTGTAAGCTAGCTCCAATGAAATGTTG  550

seq1  TTCTTTATAAGACTTGCCTTGGTCACGGTGTCTGTTCACAGCAGTAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATAAGACTTGCCTTGGTCACGGTGTCTGTTCACAGCAGTAAAAC  600

seq1  CCTAACTAAGACAGAAGTTGGTGCCAGGGACTGGGGTATTGCTGTGATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTAAGACAGAAGTTGGTGCCAGGGACTGGGGTATTGCTGTGATAG  650

seq1  GCCTGATGATGCTTTGATTTGAAAGTGTGAATTTTTGGTCTTTGGATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATGATGCTTTGATTTGAAAGTGTGAATTTTTGGTCTTTGGATTTG  700

seq1  GAATTCAGTGGAATGCTTTAAATGGGGCTTAATGGGTCATCCTAGTAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGAATGCTTTAAATGGGGCTTAATGGGTCATCCTAGTAGGA  750

seq1  ATATGGAAGTCTTTGTT  767
      |||||||||||||||||
seq2  ATATGGAAGTCTTTGTT  767