BAC Information

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BAC

Clone NameB6Ng01-292O04
Chromosome10 (Build37)
Map Location 108,866,242 - 108,867,313
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667814, Syt1, EG368203
Downstream geneNav3, LOC100042497, LOC100042502, LOC100042506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292O04.bB6Ng01-292O04.g
ACCGA089406GA089407
length1,2051,079
definitionB6Ng01-292O04.b B6Ng01-292O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagagctactaagagctggcttcctgagctcat
ctagtgacgagtatctcctagagacctccgctaatcgatcttttttcttt
tcttttttcttttccttccttctaatctctccccaggtattcttacctga
cctaaacttttcctcgggttcaagacccttggaaaggcctgtatacttat
tttgtgtaccatattttctctttgctcctactctctctccccgctttact
tctgatagcttgtcctgaatttcatctagaatccgccctgccttaaccac
ttgataacatgtgaaaaggaacaaaagggcttctaacactagaaaaaatt
caaggccaaacattttccactttacttctgatagactgtcttgaatttcc
ttagaaagttcaagatcagacttacctcgtaaagctgtactcactggtac
tctcgttccccagctgaaaagttctgaattcatacagttgaatccttctt
aacagtctgctttacgggaacctttattaccgcgacccgcagttctggtt
ctggaatgagggatcttccttgcgccagtcccgagttttttctcgtcccg
gaattcggcaccaattgttattagacgcgttctcacgaccggccaggaaa
gacgcaacaaaccagaatcttctgcggcaaagctttattgcttacatctt
caggagcaagagtgtaagaagcaagagagagagaaaacgaaaccccgtcc
ctattaaggagaattttccttcgcctaggacgtgtcactccctgattggc
tgcagcccatcggccgagttgacgtcacgaggaaggcagagcacatggag
tgaagaaccaccctcggcacatgcgcagattatttgtttaccacttagaa
cacagctgtcagcgccatcttgtaacggcgaatgtgggcgcggctcccaa
caccttgatatagtttttatgtccctaagagacagagcagatagtcacct
acccctgaatttccctaatgctcataagtcaagcctatagctcagttggg
tgctatctgtatgggagactctagcatgtggactttgcagaataaaacac
ctctgtataacatacctgtttggtctggagatatacctcctacagctata
ccttttgaactcacgacctctacatacctttggaagtctataaccacagt
gctcg
gaattcactctgtctatcctgttctgtaacatctgtacctggtttcatgg
ggtacaaccatcataaaattgttttaaaaaaccaaacatctttaaataaa
cactatgcaattttacatataggtttgccacatgtgctggttatgcctat
gttaacgtgacataagttagagttttctgaaggaaggtaatctcaaatga
gaaaatgcttccataaggtccagctgtaagagattttcttaattagtgat
agatgggggagaatccagcccaccgttggcggtgccattcctaggctagt
ggtcctgtgtagtctcccctcccctagcctgaaacctgcttgctcggggt
ggagcttcctgctcattcgttctgccacgcccactgctggaacctgagga
gccacacacgtgcacctttctactggaccagagattattcggcgggaatc
gggtcccctcccccttccttcataactagtgtcgcaacaataaaatttga
gctttgatcagaatgaaattgtcttagctccgttttttcttccgccccgt
ctagattcctctcttacagctccagcggccttctcagtcgaaccgttcac
gttgcgagctgctggcggccgcaacagtcctggattctataagaaagcag
actgaatgggatataagagcaagttagtaagtgcatgtatgtagatctgt
agtgtatggaacaaactatggggggggtggatttgtcaaaaaggcaaagg
attctgtgaataagctagtagacaccacccatccatggtctctgcaagag
ctcccacctctaggttcctgccccatttctatcttgactttcctcactga
ttgatgtacctggagatgtaagctaaagtaaacccctttactccccaagt
tgccttggtcactgggttttatcacagccaacagtaaccctggagccacc
acattttaagtatagtacacattttttttcccattgacttttgctcctct
cacacttctacccttgtggcttaactatcccctagtcttgtgtcattcca
ccctgttcacctctaacttaattttgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_108866242_108867313
seq2: B6Ng01-292O04.g_63_1141 (reverse)

seq1  TTTCAAAAATAAGTTAGAGGTG-ACA-GGTGG-ATGACACAAGACTA-GG  46
      |||||||| ||||||||||||| ||| ||||| |||||||||||||| ||
seq2  TTTCAAAATTAAGTTAGAGGTGAACAGGGTGGAATGACACAAGACTAGGG  50

seq1  GATAG-TAAGCCACAAAGGGTAGAAGTGTGAGA-GAGCAAAAGTTCAATG  94
      ||||| |||||||| |||||||||||||||||| ||||||||| ||||||
seq2  GATAGTTAAGCCAC-AAGGGTAGAAGTGTGAGAGGAGCAAAAG-TCAATG  98

seq1  G--AAAAAAATGTGTACTAATACTTAAAATGTGGTGGCT-CAGGGTTACT  141
      |  ||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  GGAAAAAAAATGTGTACT-ATACTTAAAATGTGGTGGCTCCAGGGTTACT  147

seq1  G-TGGCTGTGATAAAACCCAGTGACCAAGGCAACTTGGGGAGTAAAGGGG  190
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTGTGATAAAACCCAGTGACCAAGGCAACTTGGGGAGTAAAGGGG  197

seq1  TTTACTTTAGCTTACATCTCCAGGTACATCAATCAGTGAGGAAAGTCAAG  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTAGCTTACATCTCCAGGTACATCAATCAGTGAGGAAAGTCAAG  247

seq1  ATAGAAATGGGGCAGGAACCTAGAGGTGGGAGCTCTTGCAGAGACCATGG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAATGGGGCAGGAACCTAGAGGTGGGAGCTCTTGCAGAGACCATGG  297

seq1  ATGGGTGGTGTCTACTAGCTTATTCACAGAATCCTTTGCCTTTTTGACAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGGTGTCTACTAGCTTATTCACAGAATCCTTTGCCTTTTTGACAA  347

seq1  ATCCACCCCCCCCATAGTTTGTTCCATACACTACAGATCTACATACATGC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCCCCCCATAGTTTGTTCCATACACTACAGATCTACATACATGC  397

seq1  ACTTACTAACTTGCTCTTATATCCCATTCAGTCTGCTTTCTTATAGAATC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACTAACTTGCTCTTATATCCCATTCAGTCTGCTTTCTTATAGAATC  447

seq1  CAGGACTGTTGCGGCCGCCAGCAGCTCGCAACGTGAACGGTTCGACTGAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGTTGCGGCCGCCAGCAGCTCGCAACGTGAACGGTTCGACTGAG  497

seq1  AAGGCCGCTGGAGCTGTAAGAGAGGAATCTAGACGGGGCGGAAGAAAAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCGCTGGAGCTGTAAGAGAGGAATCTAGACGGGGCGGAAGAAAAAA  547

seq1  CGGAGCTAAGACAATTTCATTCTGATCAAAGCTCAAATTTTATTGTTGCG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCTAAGACAATTTCATTCTGATCAAAGCTCAAATTTTATTGTTGCG  597

seq1  ACACTAGTTATGAAGGAAGGGGGAGGGGACCCGATTCCCGCCGAATAATC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGTTATGAAGGAAGGGGGAGGGGACCCGATTCCCGCCGAATAATC  647

seq1  TCTGGTCCAGTAGAAAGGTGCACGTGTGTGGCTCCTCAGGTTCCAGCAGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCCAGTAGAAAGGTGCACGTGTGTGGCTCCTCAGGTTCCAGCAGT  697

seq1  GGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCGAGCAAGCAGGTT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCGAGCAAGCAGGTT  747

seq1  TCAGGCTAGGGGAGGGGAGACTACACAGGACCACTAGCCTAGGAATGGCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTAGGGGAGGGGAGACTACACAGGACCACTAGCCTAGGAATGGCA  797

seq1  CCGCCAACGGTGGGCTGGATTCTCCCCCATCTATCACTAATTAAGAAAAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCAACGGTGGGCTGGATTCTCCCCCATCTATCACTAATTAAGAAAAT  847

seq1  CTCTTACAGCTGGACCTTATGGAAGCATTTTCTCATTTGAGATTACCTTC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAGCTGGACCTTATGGAAGCATTTTCTCATTTGAGATTACCTTC  897

seq1  CTTCAGAAAACTCTAACTTATGTCACGTTAACATAGGCATAACCAGCACA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAAACTCTAACTTATGTCACGTTAACATAGGCATAACCAGCACA  947

seq1  TGTGGCAAACCTATATGTAAAATTGCATAGTGTTTATTTAAAGATGTTTG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAAACCTATATGTAAAATTGCATAGTGTTTATTTAAAGATGTTTG  997

seq1  GTTTTTTAAAACAATTTTATGATGGTTGTACCCCATGAAACCAGGTACAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTAAAACAATTTTATGATGGTTGTACCCCATGAAACCAGGTACAG  1047

seq1  ATGTTACAGAACAGGATAGACAGAGTGAATTC  1072
      ||||||||||||||||||||||||||||||||
seq2  ATGTTACAGAACAGGATAGACAGAGTGAATTC  1079