BAC Information

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BAC

Clone NameB6Ng01-293D04
Chromosome10 (Build37)
Map Location 111,285,277 - 111,286,407
singlet/doubletsinglet
Overlap genenone
Upstream geneCsrp2, Zdhhc17, EG432502, LOC667904, Osbpl8, Bbs10, Nap1l1, EG382421, Phlda1
Downstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2, LOC100042639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293D04.bB6Ng01-293D04.g
ACCGA089638GA089639
length1,1901,118
definitionB6Ng01-293D04.b B6Ng01-293D04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattacaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacttgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaacctcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccataaccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatgggatcacagggctccc
aatggaggagctagagaaagtagccaaggagctaaagggatctggccacc
ctatagtggaacaacattatgaactaaccagtaccccggagctcttgact
ctagctgcatatgtatcaaagatggtcctagtcggcatccactgaaagaa
ggccattggactgtgcaactcttcattgctctagtacatggaaaccgcca
ggtccctaatatgtgagagtggcttggggagggggtagtg
gaattcaagggtgatacgctaaatgcttctgagagtaaacaatgttgttg
gtaaactgcttagcctggacagtgtcagtggtgaagtagagataagtttt
atttatattgatacagcttgaggaggaaagatatttaggaaagatgtaga
aaactgaagagctcacagtgcttttgaaagcctccaccgtgaagaagagg
aagataataggatggtaggaatgaacagagctgagggaggttttaaacac
tcagaacaatgagctcatcagatgatccaggaaagagacatgaatacccc
aaaattagatatagtcaatgagagtgttcctgccatgaccgagcagatgt
gaggagttccattaaagagccatggtttgaatctcggagagtaaggaaca
caatgatgtgagcagaggcaggcacatcatgacacactcagtaaatactg
tgagcctcagcaaagtactgaggtgacttctcagctcccagctcctccca
tcatagtgaacatatctctggaggttttccactcgattattacctgctga
ctgctgctcatgaacaccaaaagatcctttaaggacagagctctgtggtg
atcaactaggccccacccttaatgagccatcctactaccagctcctgatg
gactaatccattgatgaagttgatgcccttttgacccaacacctcgaaag
gctccaccctggaagagaccaggcatttgtggcaggggtaggagcgtctt
cttatccaaacaataatgaagtctactcttaagaaaagagagagactttg
tttaaaacatattagtttggtcaacaacaaacctagaaagaagaatccac
agagtctcaacccaatttttggattatttctaaaatttgtttgcaagtgt
ggcatctatagacatttaaattctacatcttcgatttggttaaagggttc
taaaggaagcattgctttgaaaaaacccacgatgggctactttgtcccca
tagtgctactggactttctgttttgcccaggtatgtacttttgtgacact
ccttgagcccatacctgtggtgggagtgccaagctgcctgagacataggc
atgaactgtctataagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_111285277_111286407
seq2: B6Ng01-293D04.g_66_1183

seq1  GAATTCAAGGGTGATACGCTAAATGCTTCTGAGAGTAAACAATGTTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGTGATACGCTAAATGCTTCTGAGAGTAAACAATGTTGTTG  50

seq1  GTAAACTGCTTAGCCTGGACAGTGTCAGTGGTGAAGTAGAGATAAGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTGCTTAGCCTGGACAGTGTCAGTGGTGAAGTAGAGATAAGTTTT  100

seq1  ATTTATATTGATACAGCTTGAGGAGGAAAGATATTTAGGAAAGATGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATATTGATACAGCTTGAGGAGGAAAGATATTTAGGAAAGATGTAGA  150

seq1  AAACTGAAGAGCTCACAGTGCTTTTGAAAGCCTCCACCGTGAAGAAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAGAGCTCACAGTGCTTTTGAAAGCCTCCACCGTGAAGAAGAGG  200

seq1  AAGATAATAGGATGGTAGGAATGAACAGAGCTGAGGGAGGTTTTAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATAGGATGGTAGGAATGAACAGAGCTGAGGGAGGTTTTAAACAC  250

seq1  TCAGAACAATGAGCTCATCAGATGATCCAGGAAAGAGACATGAATACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACAATGAGCTCATCAGATGATCCAGGAAAGAGACATGAATACCCC  300

seq1  AAAATTAGATATAGTCAATGAGAGTGTTCCTGCCATGACCGAGCAGATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGATATAGTCAATGAGAGTGTTCCTGCCATGACCGAGCAGATGT  350

seq1  GAGGAGTTCCATTAAAGAGCCATGGTTTGAATCTCGGAGAGTAAGGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTTCCATTAAAGAGCCATGGTTTGAATCTCGGAGAGTAAGGAACA  400

seq1  CAATGATGTGAGCAGAGGCAGGCACATCATGACACACTCAGTAAATACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGTGAGCAGAGGCAGGCACATCATGACACACTCAGTAAATACTG  450

seq1  TGAGCCTCAGCAAAGTACTGAGGTGACTTCTCAGCTCCCAGCTCCTCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTCAGCAAAGTACTGAGGTGACTTCTCAGCTCCCAGCTCCTCCCA  500

seq1  TCATAGTGAACATATCTCTGGAGGTTTTCCACTCGATTATTACCTGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTGAACATATCTCTGGAGGTTTTCCACTCGATTATTACCTGCTGA  550

seq1  CTGCTGCTCATGAACACCAAAAGATCCTTTAAGGACAGAGCTCTGTGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTCATGAACACCAAAAGATCCTTTAAGGACAGAGCTCTGTGGTG  600

seq1  ATCAACTAGGCCCCACCCTTAATGAGCCATCCTACTACCAGCTCCTGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTAGGCCCCACCCTTAATGAGCCATCCTACTACCAGCTCCTGATG  650

seq1  GACTAATCCATTGATGAAGTTGATGCCCTTTTGACCCAACACCTCGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAATCCATTGATGAAGTTGATGCCCTTTTGACCCAACACCTCGAAAG  700

seq1  GCTCCACCCTGGAAGAGACCAGGCATTTGTGGCAGGGGTAGGAGCGTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCCTGGAAGAGACCAGGCATTTGTGGCAGGGGTAGGAGCGTCTT  750

seq1  CTTATCCAAACAATAATGAAGTCTACTCTTAAGAAAAGAGAGAGACTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCAAACAATAATGAAGTCTACTCTTAAGAAAAGAGAGAGACTTTG  800

seq1  TTTAAAACATATTAGTTTGGTCAACAACAAACCTAGAAAGAAGAATCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACATATTAGTTTGGTCAACAACAAACCTAGAAAGAAGAATCCAC  850

seq1  AGAGTCTCAACCCAATTTTTGGATTATTTCTAAAATTTGTTTGCAAGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTCAACCCAATTTTTGGATTATTTCTAAAATTTGTTTGCAAGTGT  900

seq1  GGCATCTATAGACATTTAAATTCTACATCTTCGATTTGGTTTAAAGGGTT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGCATCTATAGACATTTAAATTCTACATCTTCGATTTGG-TTAAAGGGTT  949

seq1  CT-AAGGAAGCATTGCTTTGAAAAAACCCACGATGGCCTAACTTTGTCCC  999
      || ||||||||||||||||||||||||||||||||| || ||||||||||
seq2  CTAAAGGAAGCATTGCTTTGAAAAAACCCACGATGGGCT-ACTTTGTCCC  998

seq1  CATAGTGCTACTGGACCTTTCTGTTTTGCCCAGGTATGTACTTTTGTTGA  1049
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  CATAGTGCTACTGGA-CTTTCTGTTTTGCCCAGGTATGTACTTTTG-TGA  1046

seq1  CACTCCCTTGAGCCCATA-CTGTGGTGGGAAGTGCCAAGCTGGCTGAGGA  1098
      |||| ||||||||||||| |||||||||| |||||||||||| |||| ||
seq2  CACT-CCTTGAGCCCATACCTGTGGTGGG-AGTGCCAAGCTGCCTGA-GA  1093

seq1  CATAGGGCATTTGAGAACTGTCTTTATTAAGGA  1131
      |||| |||||    |||||||||    ||||||
seq2  CATA-GGCAT----GAACTGTCT---ATAAGGA  1118