BAC Information

Click to search

BAC

Clone NameB6Ng01-293K20
Chromosome10 (Build37)
Map Location 91,245,053 - 91,339,946
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293K20.bB6Ng01-293K20.g
ACCGA090000GA090001
length1,1521,094
definitionB6Ng01-293K20.b B6Ng01-293K20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,245,053 - 91,246,209)(91,338,856 - 91,339,946)
sequence
gaattcttctgcattaaagtagtatttgagagatgtggttgtagcttaaa
aatagaaaaacatgccatgcttaataagatctacccaattaatttccact
gactcacttcccaaacttcctcaggaaaagcttaagtgtgatatttctca
aaatagcatgactgaaatatctggtactaattgtctacagaacaccggac
accacaggtgctccacacgtcatcttcttgaacctccatgaaattcccaa
gaggcagctgctaccatcacgagtcaccagggtaaaattacaaaaaggaa
ggttcatattagtatttattcagtgtcaaacatctagtcagagagagaga
gaaaaaatacagatttcagcagagagttgtcacttcctcatgttgacttt
caataagacccgaggatcactttacagttttcattttctattatattttt
atttccatccatgtatttcctcatttatttattcagtggtttgttcaaaa
aaatatttgaaggcatagctttaatattcaagtgctcagaataagataag
agacaaatgaaagtagagagtgagaaatttggaataatttcaagacaagc
catttgataactttactttaccctagaatattcctgaggttttcaagaat
caatgtggtttgtaatgagaaatgagcaagaaaagcatagaaaatgacac
ttccgttgggtttatcttttacctgatttatgtctacgcccaaatgtctc
ttcattgagatgatttcctcatgtcacttctgcctctttttaaccaataa
aaagttgctcagagaagtaatgatcaacaagtccagagactttcatctat
gatatggaatttggcagctactgggtatcaatcatattaacatacaaaag
ccaactgcatttttctctttgagagcaataagcatattatatctaaatta
aatgtaatctaacaattgctatctacattagctttttttctacttatcta
tccttttttcacatttttattagatatttctttataatacaatttcaatt
tcaaatgctacccaaagttccctataccctctcctcgccctgctccccta
cccactcacttcttgcctctgacttgggcattccctgtactgggcaatat
aa
gaattctttatggaacagttcattttgctgacaaattctgggttcaggtc
tgcttacagtggtccattctgttttaagtacttctttcttattttaaatt
tagatattttcttcatttacatttcaaattctatccccaaagccccctat
accctccccgcaccctgctccccaacccacccactcccacttcccagccc
tggcattcccctgtactggtgcatatgatcttcacaagaccaagggccac
tcctcccattgatggccaactaggccatcctctgctacatatgcaactag
agacacagctctgggagttactggttagttcatattgttaagcacaaaga
aaacctgtcctttggcttacttcagctttctctgggcagtggaaatagct
ctggttgaataggcttgttattatttaggagctgtgaagcctgaggacca
caaaatcatgacaactgaaaggacactgaaatgcctccagagagagagag
agagagagagagagagagagagttagagattgaaacagagacatacagca
gagatagagaagcagagacagagacacagagacagacagatagacagaca
gacagacaggcatgatgaatgaatgaatgaatgaatgaatgaatgaatga
atgaatatatgaatggcagagcataggaggaaatatcagttcaggtttat
tatggtgaccaaggtccttcatgatgcttcctgtgagaatatgatatcaa
gataaaaactatgggttcataagcttaggacctagcacagtaattaattt
cagcacaatcctaggcccaggagggctgcctctggttatataatagcccc
aaccttggcattattaaaacaggtttatagtagctaagtattagtgttga
taaaaagttgggttcacttggtagactctggaatacttggggtatatttg
aaaaccatgcccctggggaagaaaaatttcatttcagaaaaactcagaca
agtgcccgttgcatttttatgattgtccaggaacaaagtgtatctaacac
ataactgtaagccagaatgttagaacatcaagtcacaaatgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91245053_91246209
seq2: B6Ng01-293K20.b_45_1196

seq1  GAATTCTTCTGCATTAAAGTAGTATTTGAGAGATGTGGTTGTAGCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCATTAAAGTAGTATTTGAGAGATGTGGTTGTAGCTTAAA  50

seq1  AATAGAAAAACATGCCATGCTTAATAAGATCTACCCAATTAATTTCCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAAACATGCCATGCTTAATAAGATCTACCCAATTAATTTCCACT  100

seq1  GACTCACTTCCCAAACTTCCTCAGGAAAAGCTTAAGTGTGATATTTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCACTTCCCAAACTTCCTCAGGAAAAGCTTAAGTGTGATATTTCTCA  150

seq1  AAATAGCATGACTGAAATATCTGGTACTAATTGTCTACAGAACACCGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCATGACTGAAATATCTGGTACTAATTGTCTACAGAACACCGGAC  200

seq1  ACCACAGGTGCTCCACACGTCATCTTCTTGAACCTCCATGAAATTCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGGTGCTCCACACGTCATCTTCTTGAACCTCCATGAAATTCCCAA  250

seq1  GAGGCAGCTGCTACCATCACGAGTCACCAGGGTAAAATTACAAAAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGCTGCTACCATCACGAGTCACCAGGGTAAAATTACAAAAAGGAA  300

seq1  GGTTCATATTAGTATTTATTCAGTGTCAAACATCTAGTCAGAGAGAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATATTAGTATTTATTCAGTGTCAAACATCTAGTCAGAGAGAGAGA  350

seq1  GAAAAAATACAGATTTCAGCAGAGAGTTGTCACTTCCTCATGTTGACTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATACAGATTTCAGCAGAGAGTTGTCACTTCCTCATGTTGACTTT  400

seq1  CAATAAGACCCGAGGATCACTTTACAGTTTTCATTTTCTATTATATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGACCCGAGGATCACTTTACAGTTTTCATTTTCTATTATATTTTT  450

seq1  ATTTCCATCCATGTATTTCCTCATTTATTTATTCAGTGGTTTGTTCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATCCATGTATTTCCTCATTTATTTATTCAGTGGTTTGTTCAAAA  500

seq1  AAATATTTGAAGGCATAGCTTTAATATTCAAGTGCTCAGAATAAGATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGAAGGCATAGCTTTAATATTCAAGTGCTCAGAATAAGATAAG  550

seq1  AGACAAATGAAAGTAGAGAGTGAGAAATTTGGAATAATTTCAAGACAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAATGAAAGTAGAGAGTGAGAAATTTGGAATAATTTCAAGACAAGC  600

seq1  CATTTGATAACTTTACTTTACCCTAGAATATTCCTGAGGTTTTCAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATAACTTTACTTTACCCTAGAATATTCCTGAGGTTTTCAAGAAT  650

seq1  CAATGTGGTTTGTAATGAGAAATGAGCAAGAAAAGCATAGAAAATGACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGGTTTGTAATGAGAAATGAGCAAGAAAAGCATAGAAAATGACAC  700

seq1  TTCCGTTGGGTTTATCTTTTACCTGATTTATGTCTACGCCCAAATGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTTGGGTTTATCTTTTACCTGATTTATGTCTACGCCCAAATGTCTC  750

seq1  TTCATTGAGATGATTTCCTCATGTCACTTCTGCCTCTTTTTAACCAATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGAGATGATTTCCTCATGTCACTTCTGCCTCTTTTTAACCAATAA  800

seq1  AAAGTTGCTCAGAGAAGTAATGATCAACAAGTCCAGAGACTTTCATCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGCTCAGAGAAGTAATGATCAACAAGTCCAGAGACTTTCATCTAT  850

seq1  GATATGGAATTTGGCAGCTACTGGGTATCAATCATATTAACATACAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGAATTTGGCAGCTACTGGGTATCAATCATATTAACATACAAAAG  900

seq1  CCAACTGCATTTTTTCTCTTTGAGAGCAATAAGCATATTATATCTAAATT  950
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGCA-TTTTTCTCTTTGAGAGCAATAAGCATATTATATCTAAATT  949

seq1  AAATGTAATCTAACAATTGCTATCTACATTAGCTTTTTTTCTACTTATCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATCTAACAATTGCTATCTACATTAGCTTTTTTTCTACTTATCT  999

seq1  ATCCTTTTTTCACATTTTTTATTAGATATTTTCTTTAT-ATACATTTCAA  1049
      |||||||||||||| ||||||||||||| ||||||||| ||||| ||  |
seq2  ATCCTTTTTTCACA-TTTTTATTAGATA-TTTCTTTATAATACAATTTCA  1047

seq1  ATTTCAAATGCTACCCCAAAAGTTCCCTATACCCTCTCCTCGCCCTGCTC  1099
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  ATTTCAAATGCTACCC--AAAGTTCCCTATACCCTCTCCTCGCCCTGCTC  1095

seq1  CCCTACCCACTCAC-TCCTGCTTCTTGGCCCTGGCATTCCCCTGTACTGG  1148
      |||||||||||||| || ||| || || |   |||||| |||||||||||
seq2  CCCTACCCACTCACTTCTTGCCTC-TGACTTGGGCATT-CCCTGTACTGG  1143

seq1  GGCATATAA  1157
      |  ||||||
seq2  GCAATATAA  1152

seq1: chr10_91338856_91339946
seq2: B6Ng01-293K20.g_66_1159 (reverse)

seq1  CTACATTGGTGAACTTGATGTCTTAACA-TCTGCCTTACAGGTATGTGTT  49
      ||||||| ||| |||||||||  ||||| |||| ||||||| ||||||||
seq2  CTACATTTGTG-ACTTGATGTTCTAACATTCTGGCTTACAGTTATGTGTT  49

seq1  AGATACACTTTGTT-CTGGACAATCAATAAAATGCCACGGGCACCTTGTC  98
      |||||||||||||| |||||||||||  ||||||| ||||||| ||||||
seq2  AGATACACTTTGTTCCTGGACAATCATAAAAATGCAACGGGCA-CTTGTC  98

seq1  TGGGTTTTCTTGAAATGGAA-TTTTCTT-CCCAGGGGCATGGTTTTCAAA  146
      || |||||  ||||||| || ||||||| |||||||||||||||||||||
seq2  TGAGTTTTTCTGAAATGAAATTTTTCTTCCCCAGGGGCATGGTTTTCAAA  148

seq1  TATACCCCAAGTATTCCAGAGTCTACCAAGTGAA-CCAACTTTTTATCAA  195
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TATACCCCAAGTATTCCAGAGTCTACCAAGTGAACCCAACTTTTTATCAA  198

seq1  CACTAATACTTAGCTACTATAAACCTGTTTTAATAATGCCAAGGTTGGGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATACTTAGCTACTATAAACCTGTTTTAATAATGCCAAGGTTGGGG  248

seq1  CTATTATATAACCAGAGGCAGCCCTCCTGGGCCTAGGATTGTGCTGAAAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATATAACCAGAGGCAGCCCTCCTGGGCCTAGGATTGTGCTGAAAT  298

seq1  TAATTACTGTGCTAGGTCCTAAGCTTATGAACCCATAGTTTTTATCTTGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACTGTGCTAGGTCCTAAGCTTATGAACCCATAGTTTTTATCTTGA  348

seq1  TATCATATTCTCACAGGAAGCATCATGAAGGACCTTGGTCACCATAATAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATTCTCACAGGAAGCATCATGAAGGACCTTGGTCACCATAATAA  398

seq1  ACCTGAACTGATATTTCCTCCTATGCTCTGCCATTCATATATTCATTCAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAACTGATATTTCCTCCTATGCTCTGCCATTCATATATTCATTCAT  448

seq1  TCATTCATTCATTCATTCATTCATTCATTCATCATGCCTGTCTGTCTGTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTCATTCATTCATTCATTCATTCATCATGCCTGTCTGTCTGTC  498

seq1  TGTCTATCTGTCTGTCTCTGTGTCTCTGTCTCTGCTTCTCTATCTCTGCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCTGTCTGTCTCTGTGTCTCTGTCTCTGCTTCTCTATCTCTGCT  548

seq1  GTATGTCTCTGTTTCAATCTCTAACTCTCTCTCTCTCTCTCTCTCTCTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCTCTGTTTCAATCTCTAACTCTCTCTCTCTCTCTCTCTCTCTCT  598

seq1  CTCTCTCTGGAGGCATTTCAGTGTCCTTTCAGTTGTCATGATTTTGTGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTGGAGGCATTTCAGTGTCCTTTCAGTTGTCATGATTTTGTGGT  648

seq1  CCTCAGGCTTCACAGCTCCTAAATAATAACAAGCCTATTCAACCAGAGCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGCTTCACAGCTCCTAAATAATAACAAGCCTATTCAACCAGAGCT  698

seq1  ATTTCCACTGCCCAGAGAAAGCTGAAGTAAGCCAAAGGACAGGTTTTCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACTGCCCAGAGAAAGCTGAAGTAAGCCAAAGGACAGGTTTTCTT  748

seq1  TGTGCTTAACAATATGAACTAACCAGTAACTCCCAGAGCTGTGTCTCTAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTAACAATATGAACTAACCAGTAACTCCCAGAGCTGTGTCTCTAG  798

seq1  TTGCATATGTAGCAGAGGATGGCCTAGTTGGCCATCAATGGGAGGAGTGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATATGTAGCAGAGGATGGCCTAGTTGGCCATCAATGGGAGGAGTGG  848

seq1  CCCTTGGTCTTGTGAAGATCATATGCACCAGTACAGGGGAATGCCAGGGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTCTTGTGAAGATCATATGCACCAGTACAGGGGAATGCCAGGGC  898

seq1  TGGGAAGTGGGAGTGGGTGGGTTGGGGAGCAGGGTGCGGGGAGGGTATAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGTGGGAGTGGGTGGGTTGGGGAGCAGGGTGCGGGGAGGGTATAG  948

seq1  GGGGCTTTGGGGATAGAATTTGAAATGTAAATGAAGAAAATATCTAAATT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTTGGGGATAGAATTTGAAATGTAAATGAAGAAAATATCTAAATT  998

seq1  TAAAATAAGAAAGAAGTACTTAAAACAGAATGGACCACTGTAAGCAGACC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAGAAAGAAGTACTTAAAACAGAATGGACCACTGTAAGCAGACC  1048

seq1  TGAACCCAGAATTTGTCAGCAAAATGAACTGTTCCATAAAGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCAGAATTTGTCAGCAAAATGAACTGTTCCATAAAGAATTC  1094