BAC Information

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BAC

Clone NameB6Ng01-294B08
Chromosome10 (Build37)
Map Location 23,519,764 - 23,676,793
singlet/doubletdoublet
Overlap gene1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3
Upstream geneTcf21, Eya4, Rps12
Downstream geneTaar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294B08.bB6Ng01-294B08.g
ACCGA090303GA090304
length1,183721
definitionB6Ng01-294B08.b B6Ng01-294B08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,675,609 - 23,676,793)(23,519,764 - 23,520,484)
sequence
gaattcatcaaatattaacttatctcttactggatgctagattattggtc
cttttaaagatttatttttaataatttattactttgtttttattttaagt
aaattatttttagcaattttgttatttaattttattttattcttacttat
gtgtctgggtgggcgtaggggaaaaagggtatgcacatatgagtgcaggt
gctctcagaggccagagacatggagaacccccagagctggacttataggc
agtagtgaacatagtgatgtaggtgctgacaaatgcactggggtcctctg
ttggagcagtactctcctaacccctgggccatgccatctctccagcctct
atttgactttttgaaacagggtgtggctgtgtagtcctggctggcctgag
agttgctaggtagagtggacaggcatttagcttggagcaatagaaaatac
atcagagttaattcttcactaaggaatttactctataaacattctgtagc
tggatgttttaaatgcatatataattttagccttcaggaagcaggcacaa
gaggattgcaacaattttccacctggatggtataacaaaactgatatttt
ttgaaagaaaacaaaacaaacaataaaaataaaaaataaaaacagaggaa
gaagaagaaagccctgagtttggttcccacatgctcttacaaggacacat
acgaaatgggacaagcccatctgtaccggctagttttgtgtcaacttgac
acaggctggagttatcacagagaaaggaccttcagttggggaaatgcctc
cacgagatccagctgtaaggcattctctcaattagtaatcaagtatggag
gtccccttgtgggtgggaccatctctgggctggtagtcttgggttctgta
agagagcaggctgagcaagccaggggaggcaagtcagtaaggaacatccc
tccgtggcctctgcatcagcttcagcttcctcacctgctgagttccagtc
ctgacttcccttggtgatgacacagtatggagtgtaagctggaataaccc
cttcctccccaccttgcttctggtcatgaatgtttgtgcagatagcattc
ctgaacttagaccccccatcataatgccaaatagctagcactagaattgt
acctcacttagagttttggatatacacccatat
gaattccaggcagccagggccataaagtgagactttgtctccaaagaggg
ttggggaaggtgagaagggggtatagttgtggcccaggaaattcagtctg
aatttgttaagaactccggaagcaatgtttgcacaaaggaaggattctga
tgaacgttgccaggctccctctaacctttgccctctccatggtgtgagga
acggcagctgtgacataaaggttagactggagtatggagtccatgcacac
aatatggattgaagagagctcattgtgtccaaatgtttattctgtgcatc
ttgccaaagttctaggtccacagcccactgacaacttctcaaagctctta
aactgcctggatagcctgtaacccttccctctgggtgcaagtggagaggg
cttccctgatgaaggagcagcagagctcagtaagcatggagcactcactg
gttttcagcaccacgccccctcccccccaacattcccagaaagtgagaga
acggcaagggtcccattgttttactttaaaatagcagtctcagaagagaa
ggctttcccaattcagtcccatttcactggaaggttaagtttctattctg
tgctaagtcatagatatatatgcttaggtaaggagaagccaggaagtggc
caggagcaaaaaagacgagaaaaggaggaagaaaggaaggaaggaaagga
aggaagggagggagggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_23675609_23676793
seq2: B6Ng01-294B08.b_49_1231 (reverse)

seq1  ATATG---GTATATC--AAACTCTAGTGGAGGTACAATATCTAGTGCCCT  45
      |||||   |||||||  ||||||||   |||||||||| ||||||||   
seq2  ATATGGGTGTATATCCAAAACTCTAAGTGAGGTACAAT-TCTAGTGC---  46

seq1  TAAAGCTATTT-GCATTATGAT--GGTGTCTTAG-TCAGGATTGCTATTC  91
         |||||||| ||||||||||  || |||| || |||||| ||||||  
seq2  --TAGCTATTTGGCATTATGATGGGGGGTCTAAGTTCAGGAATGCTAT--  92

seq1  CTGCACAAACA-TCATGACCAAGAAGCAAGTTGGGGAGGAAAGGGTTTAT  140
      ||||||||||| |||||||| ||||||||| |||||||||| |||||  |
seq2  CTGCACAAACATTCATGACC-AGAAGCAAGGTGGGGAGGAAGGGGTTATT  141

seq1  TCAGCTTACACTTCCATACTGTTGTTCATCACCAA-GGAAGTCAGGACTG  189
       |||||||||| ||||||||||   |||||||||| ||||||||||||||
seq2  CCAGCTTACAC-TCCATACTGT--GTCATCACCAAGGGAAGTCAGGACTG  188

seq1  GAACTCAAGCAGGTGAGGAAGCTGAAGCTGATGCAGAGGCCACGGAGGGA  239
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTC-AGCAGGTGAGGAAGCTGAAGCTGATGCAGAGGCCACGGAGGGA  237

seq1  TGTTCTTTACTGACTTGCCTCCCCTGGCTTGCTCAGCCTGCTCTCTTACA  289
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTACTGACTTGCCTCCCCTGGCTTGCTCAGCCTGCTCTCTTACA  287

seq1  GAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGACCTCC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAAGACTACCAGCCCAGAGATGGTCCCACCCACAAGGGGACCTCC  337

seq1  ATACTTGATTACTAATTGAGAGAATGCCTTACAGCTGGATCTCGTGGAGG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGATTACTAATTGAGAGAATGCCTTACAGCTGGATCTCGTGGAGG  387

seq1  CATTTCCCCAACTGAAGGTCCTTTCTCTGTGATAACTCCAGCCTGTGTCA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCCAACTGAAGGTCCTTTCTCTGTGATAACTCCAGCCTGTGTCA  437

seq1  AGTTGACACAAAACTAGCCGGTACAGATGGGCTTGTCCCATTTCGTATGT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGACACAAAACTAGCCGGTACAGATGGGCTTGTCCCATTTCGTATGT  487

seq1  GTCCTTGTAAGAGCATGTGGGAACCAAACTCAGGGCTTTCTTCTTCTTCC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGTAAGAGCATGTGGGAACCAAACTCAGGGCTTTCTTCTTCTTCC  537

seq1  TCTGTTTTTATTTTTTATTTTTATTGTTTGTTTTGTTTTCTTTCAAAAAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTTATTTTTTATTTTTATTGTTTGTTTTGTTTTCTTTCAAAAAA  587

seq1  TATCAGTTTTGTTATACCATCCAGGTGGAAAATTGTTGCAATCCTCTTGT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTTTTGTTATACCATCCAGGTGGAAAATTGTTGCAATCCTCTTGT  637

seq1  GCCTGCTTCCTGAAGGCTAAAATTATATATGCATTTAAAACATCCAGCTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTTCCTGAAGGCTAAAATTATATATGCATTTAAAACATCCAGCTA  687

seq1  CAGAATGTTTATAGAGTAAATTCCTTAGTGAAGAATTAACTCTGATGTAT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTTTATAGAGTAAATTCCTTAGTGAAGAATTAACTCTGATGTAT  737

seq1  TTTCTATTGCTCCAAGCTAAATGCCTGTCCACTCTACCTAGCAACTCTCA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTGCTCCAAGCTAAATGCCTGTCCACTCTACCTAGCAACTCTCA  787

seq1  GGCCAGCCAGGACTACACAGCCACACCCTGTTTCAAAAAGTCAAATAGAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCAGGACTACACAGCCACACCCTGTTTCAAAAAGTCAAATAGAG  837

seq1  GCTGGAGAGATGGCATGGCCCAGGGGTTAGGAGAGTACTGCTCCAACAGA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGATGGCATGGCCCAGGGGTTAGGAGAGTACTGCTCCAACAGA  887

seq1  GGACCCCAGTGCATTTGTCAGCACCTACATCACTATGTTCACTACTGCCT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCAGTGCATTTGTCAGCACCTACATCACTATGTTCACTACTGCCT  937

seq1  ATAAGTCCAGCTCTGGGGGTTCTCCATGTCTCTGGCCTCTGAGAGCACCT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCCAGCTCTGGGGGTTCTCCATGTCTCTGGCCTCTGAGAGCACCT  987

seq1  GCACTCATATGTGCATACCCTTTTTCCCCTACGCCCACCCAGACACATAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCATATGTGCATACCCTTTTTCCCCTACGCCCACCCAGACACATAA  1037

seq1  GTAAGAATAAAATAAAATTAAATAACAAAATTGCTAAAAATAATTTACTT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATAAAATAAAATTAAATAACAAAATTGCTAAAAATAATTTACTT  1087

seq1  AAAATAAAAACAAAGTAATAAATTATTAAAAATAAATCTTTAAAAGGACC  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAACAAAGTAATAAATTATTAAAAATAAATCTTTAAAAGGACC  1137

seq1  AATAATCTAGCATCCAGTAAGAGATAAGTTAATATTTGATGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCTAGCATCCAGTAAGAGATAAGTTAATATTTGATGAATTC  1183

seq1: chr10_23519764_23520484
seq2: B6Ng01-294B08.g_67_787

seq1  GAATTCCAGGCAGCCAGGGCCATAAAGTGAGACTTTGTCTCCAAAGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCAGCCAGGGCCATAAAGTGAGACTTTGTCTCCAAAGAGGG  50

seq1  TTGGGGAAGGTGAGAAGGGGGTATAGTTGTGGCCCAGGAAATTCAGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAAGGTGAGAAGGGGGTATAGTTGTGGCCCAGGAAATTCAGTCTG  100

seq1  AATTTGTTAAGAACTCCGGAAGCAATGTTTGCACAAAGGAAGGATTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTTAAGAACTCCGGAAGCAATGTTTGCACAAAGGAAGGATTCTGA  150

seq1  TGAACGTTGCCAGGCTCCCTCTAACCTTTGCCCTCTCCATGGTGTGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGTTGCCAGGCTCCCTCTAACCTTTGCCCTCTCCATGGTGTGAGGA  200

seq1  ACGGCAGCTGTGACATAAAGGTTAGACTGGAGTATGGAGTCCATGCACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCAGCTGTGACATAAAGGTTAGACTGGAGTATGGAGTCCATGCACAC  250

seq1  AATATGGATTGAAGAGAGCTCATTGTGTCCAAATGTTTATTCTGTGCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGATTGAAGAGAGCTCATTGTGTCCAAATGTTTATTCTGTGCATC  300

seq1  TTGCCAAAGTTCTAGGTCCACAGCCCACTGACAACTTCTCAAAGCTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAAGTTCTAGGTCCACAGCCCACTGACAACTTCTCAAAGCTCTTA  350

seq1  AACTGCCTGGATAGCCTGTAACCCTTCCCTCTGGGTGCAAGTGGAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCTGGATAGCCTGTAACCCTTCCCTCTGGGTGCAAGTGGAGAGGG  400

seq1  CTTCCCTGATGAAGGAGCAGCAGAGCTCAGTAAGCATGGAGCACTCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGATGAAGGAGCAGCAGAGCTCAGTAAGCATGGAGCACTCACTG  450

seq1  GTTTTCAGCACCACGCCCCCTCCCCCCCAACATTCCCAGAAAGTGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGCACCACGCCCCCTCCCCCCCAACATTCCCAGAAAGTGAGAGA  500

seq1  ACGGCAAGGGTCCCATTGTTTTACTTTAAAATAGCAGTCTCAGAAGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCAAGGGTCCCATTGTTTTACTTTAAAATAGCAGTCTCAGAAGAGAA  550

seq1  GGCTTTCCCAATTCAGTCCCATTTCACTGGAAGGTTAAGTTTCTATTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCCCAATTCAGTCCCATTTCACTGGAAGGTTAAGTTTCTATTCTG  600

seq1  TGCTAAGTCATAGATATATATGCTTAGGTAAGGAGAAGCCAGGAAGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGTCATAGATATATATGCTTAGGTAAGGAGAAGCCAGGAAGTGGC  650

seq1  CAGGAGCAAAAAAGACGAGAAAAGGAGGAAGAAAGGAAGGAAGGAAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCAAAAAAGACGAGAAAAGGAGGAAGAAAGGAAGGAAGGAAAGGA  700

seq1  AGGAAGGGAGGGAGGGAGGAA  721
      |||||||||||||||||||||
seq2  AGGAAGGGAGGGAGGGAGGAA  721