MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-294F22
Chromosome	10 (Build37)
Map Location	49,890,589 - 49,891,729
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Grik2
Downstream gene	LOC629652, Ascc3, Sim1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Grik2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14806 MGI:95815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629652 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ascc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77987 MGI:1925237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 65 ESTs, 5 Proteins

name	Sim1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20464 MGI:98306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grik2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754073 GeneID:14806 MGI:95815
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, kainate 2 (beta 2) transcript_id : NM_010349.1

name	Ascc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387974 GeneID:77987 MGI:1925237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 65 ESTs, 5 Proteins product : activating signal cointegrator 1 complex subunit 3, transcript variant 1 transcript_id : XM_125617.7

name	Sim1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361519 GeneID:20464 MGI:98306
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-minded homolog 1 (Drosophila) transcript_id : NM_011376.2

name	Grik2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754074 CCDS:CCDS23830.1 GeneID:14806 MGI:95815
definition	GO_component : GO:0008328 - ionotropic glutamate receptor complex [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA]; GO:0045202 - synapse [Evidence TAS] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IMP]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0015277 - kainate selective glutamate receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glutamate receptor, ionotropic, kainate 2 (beta 2) protein_id : NP_034479.1

name	Ascc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932285 GeneID:77987 MGI:1925237
definition	codon_start : 1 product : activating signal cointegrator 1 complex subunit 3 isoform 1 protein_id : XP_125617.5

name	Sim1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106403 GeneID:20464 MGI:98306
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IDA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : single-minded 1 product : single-minded homolog 1 protein_id : NP_035506.1

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 1 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 2 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 3 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 4 pseudo : _no_value

clone name	MSMg01-498B15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-369A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-364M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188E15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318B22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-269G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080K18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-057B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541B01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487C08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-129H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144G16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-294F22.b	B6Ng01-294F22.g
ACC	GA090515	GA090516
length	1,120	1,183
definition	B6Ng01-294F22.b	B6Ng01-294F22.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcattcaagagaaagcatataataatagctataatgtctttttttg taatagtcaaaactgggataactcaaatgttcttcagctgggggatggat gtccaaactacagtctatccgtaaaatgaaacagttctcagacaaactgg gaaatggactatagaagcatgtagcgatgtgttgatatctaagacagtaa tcctgttgagtgaaagctagtttgaaataactatgtattagatgattgat ttatatgacacataaaaaatggaacacaccagggcagaatcaaatcagtc ttgtctggtaacaggaagagagggagaaatcaaacaggggcatgaataga attcatgggaataggggcatagatttgttttgcttgttgtattggataaa gggtatacaattatacacattttaaggacagataacactgataatagaat tgtacctttaaaatgtaaattgtacctgctacatcaacaaacaagactaa aagaatcaaatagtctatagtttaagaaattctataaggctagcagtgat ggcatagcatagaatccacataccattgcttcctggtctttttgctaaga tcaagcatagtatctgttcttatcagtttaataacacacacatgctaagt gttgtcttgaagcaaaacatttgaaacaggcaactcatgagatttagttt tctcttgaatgtagtgctaataacattcatatttaggagacaatatttat taagggactgttaagacaacagtatgtaaattccttgtttgttgaggctt ctggtcaatatcctgtagggagtgttctttgctgtgttatgctgtatttc aggattaaaattacagcccacatgattctcacgtttaaccatgaaagtgg acacattgtattccagggtctattttccatggtaatgttgtacctctgtc atgtagagtcagtagttccagattaagtaactttgatgtttatctttgca cgattttggagtacttcacactttccaaaactgtatctatagttgtgtga gctagctctatgctgagcatctcctccagcccaactgtattcctatagtg ttcttgattaatagtacttg	gaattctcaccagaggaataccgaatggcagagaagcacttgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagt agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaacaggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa gaaactcacacaatatatattcactgataagtggatattagccccaaacc taggatacccaagatataagatataatttgctaaacacatgaaactcaag aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa caaaacacccatggaaggagttacagagacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccatcatc agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa ggacccagatgtagctatctcttgtgagactatgcccgggcctagcaaac acagaagtggatgctcacagtcagctaatggatggatcataggctcccaa tggagagctagagaaagtagccaaggagctaatggatctgcaccctataa gtggaacaacatatgactaaccagttacccggagctctgacctctagctg catatttatcaaagaatggcttagttcgcattcactgtacgaagaggtca atggaacttgcaaccttttatatggtcagtacgggatcctagtacaaggg tgaatgttcgttcataggaatatgtcgttatca
quality values	Open. Hide. 58 33 30 26 58 34 17 54 58 29 11 42 58 58 58 47 62 62 42 52 62 62 62 62 62 62 62 62 62 62 54 51 56 43 30 32 30 38 44 47 62 62 62 62 62 62 49 62 62 59 62 62 62 62 59 62 62 46 59 62 62 62 62 62 62 62 62 59 56 62 62 59 62 59 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 59 49 62 62 59 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 54 52 58 58 58 54 58 58 58 42 58 58 58 58 58 54 58 45 42 58 54 58 58 58 58 58 58 58 58 58 54 58 58 58 58 54 54 58 54 58 58 54 54 58 54 58 54 54 58 54 45 58 52 58 58 54 58 58 53 58 58 47 51 58 58 50 51 58 51 51 58 51 58 51 54 58 41 51 58 49 50 54 53 58 58 58 58 53 58 54 58 58 58 47 52 58 51 58 58 52 51 58 58 58 58 58 49 49 39 49 58 50 51 34 53 50 58 52 58 53 53 53 52 53 53 47 50 58 58 53 53 53 51 51 51 52 52 49 50 51 51 42 42 54 52 58 58 51 58 58 54 58 54 51 52 49 44 50 50 54 54 53 53 54 39 51 54 47 46 54 39 49 52 54 39 53 53 54 54 54 49 52 54 54 54 49 51 54 37 49 42 29 54 42 39 45 35 51 39 42 53 54 54 31 37 42 54 42 53 34 54 54 54 39 40 40 53 49 44 42 37 45 37 54 25 37 40 45 53 32 42 31 46 53 40 37 47 31 52 52 40 37 47 47 51 53 39 32 21 51 53 31 34 26 17 52 53 39 40 52 36 34 46 47 32 35 35 47 32 32 31 39 42 43 27 27 31 31 45 37 31 46 42 28 33 31 31 30 45 31 33 51 31 32 34 31 31 28 29 37 31 51 30 43 31 30 31 33 31 19 30 31 31 42 38 46 33 15 25 22 27 37 28 31 32 42 30 38 27 21 24 47 30 37 31 37 43 27 24 31 32 48 38 33 31 37 32 25 31 33 25 31 31 31 36 32 39 29 32 32 47 41 30 9 25 23 36 34 25 24 48 48 41 31 39 32 31 33 34 33 43 25 21 24 26 31 33 37 16 30 31 31 32 9 5 7 16 43 27 19 30 19 31 24 31 26 34 48 33 29 31 32 26 24 18 26 33 27 28 25 30 18 24 26 29 27 32 27 19 48 30 8 23 31 20 26 43 39 25 11 24 22 31 18 24 4 12 21 31 31 11 12 17 22 32 22 19 34 34 21 20 12 20 13 18 34 14 29 13 33 14 25 31 32 20 21 27 10 21 14 19 27 13 13 24 11 18 26 25 10 19 13 20 22 18 40 17 14 22 16 24 26 34 9 20 20 22 10 34 27 14 16 15 18 9 28 21 29 34 23 14 11 18 9 25 24 19 14 21 9 3 6 31 15 18 47 18 7 14 11 30 34 15 12 16 12 6 4 4 3 5 2 4 4 1 5 5 5 2 3 5 6 22 5 27 6 12 6 8 4 8 6 21 5 11 3 6 12 19 5 22 14 23 10 8 8 6 16 10 24 10 6 17 27 17 15 8 7 5 20 5 6 3 5 4 6 13 3 3 2 1 1 10 5 11 6 4 4 5 2 3 8 25 16 5 9 4 3 2 5 6 6 2	Open. Hide. 62 47 42 47 62 62 62 62 56 62 47 33 24 25 18 30 25 27 44 51 44 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 59 59 62 62 59 59 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 56 54 62 62 62 62 46 62 62 62 62 62 62 62 62 54 53 62 62 62 54 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 54 58 58 54 58 54 54 58 58 58 58 58 58 48 47 58 58 52 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 45 42 58 58 54 58 58 54 41 58 58 54 41 58 58 58 58 45 39 58 58 52 48 54 54 54 58 54 58 58 58 58 42 58 58 54 46 58 52 54 48 50 46 54 48 58 58 49 50 49 50 58 47 47 58 58 50 53 58 54 50 53 53 51 37 58 53 53 53 54 53 53 51 58 51 50 58 51 58 51 50 50 58 52 53 58 58 51 37 50 49 49 58 33 41 58 58 51 32 58 42 44 48 50 42 25 58 31 26 50 51 58 50 50 53 50 51 37 46 50 50 58 50 54 46 53 53 41 41 42 58 54 50 33 50 53 58 52 50 37 50 41 54 50 51 58 50 50 53 53 39 51 50 39 58 37 58 34 29 53 50 53 41 37 19 50 58 32 50 40 53 53 40 58 39 47 31 27 49 52 42 40 50 39 27 26 22 30 16 47 38 38 42 31 38 41 32 41 39 54 39 37 35 29 31 50 49 50 37 39 41 44 29 29 37 50 54 51 29 11 54 33 31 28 49 27 40 35 32 53 23 29 32 30 54 53 37 52 54 40 45 41 46 25 38 52 32 54 12 30 28 32 47 54 51 38 52 31 26 35 32 32 22 47 25 32 47 32 32 29 47 32 21 25 32 41 18 40 23 52 35 32 31 42 31 37 53 46 25 31 23 52 29 31 40 40 33 32 42 35 39 31 28 35 34 31 29 37 17 33 17 51 31 36 36 33 31 26 20 23 18 31 25 26 34 33 38 32 21 31 24 31 23 30 27 26 24 43 27 30 19 31 18 47 47 29 22 25 33 36 34 48 22 22 24 23 15 46 28 22 24 30 23 31 31 29 24 31 34 17 36 23 33 34 28 22 31 24 32 43 28 33 22 34 27 27 24 10 46 9 29 46 30 11 23 32 32 19 31 34 46 29 21 19 25 31 32 30 33 17 31 19 16 8 13 32 31 32 30 15 21 18 25 19 32 31 24 29 34 30 16 27 26 18 9 14 28 31 26 30 20 17 22 5 9 12 18 32 20 39 12 13 21 28 22 20 12 4 7 7 27 32 27 24 21 19 30 39 25 15 23 21 22 22 18 9 13 22 7 29 13 23 33 14 4 4 5 19 7 15 17 21 21 23 27 15 28 23 17 15 28 9 4 19 13 5 22 6 18 11 8 13 28 16 31 12 27 15 34 9 26 10 16 11 16 20 8 5 5 7 25 28 11 3 4 29 11 15 24 7 17 12 14 13 13 21 11 27 13 7 13 14 13 26 10 8 4 4 11 4 10 23 13 23 17 15 6 7 23 16 16 13 4 5 10 18 5 7 8 6 3 3 1 12 6 5 3 7 10 3 1 3 2 2 7 6 4 7 16 12 4 11 4 5 12 5 6 5 7 10 14 6 5 10 12 22 5 9 21 11 28 6 4 7 9 8 4 5 6 3 1 6 10 5 1 5 13 5 3 2 3 7 3 2 5 3 7 15 5 3 2 2 16 4 4 11 14 5 4 1 4 5 14 1 1 4 8 5 4 18 18 5 4 6 1 3 5 1 4 16 3 1 1 2 2 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_49890589_49891729
seq2: B6Ng01-294F22.b_46_1165 (reverse)

seq1  CAAGTTAACTATTATACCAGAACACTATTAAGAAATACAGTTTTGGGGCT  50
      |||||  |||||||  | ||||||||||  || |||||||||   |||||
seq2  CAAGT--ACTATTAATCAAGAACACTAT--AGGAATACAGTT---GGGCT  43

seq1  GGA-GAGATGGCTCAGCCATTAGAGGCTAGGCTCACAACCAAAAATATAA  99
      ||| ||||| |||||||   |||| |||| |||||    || || |||  
seq2  GGAGGAGAT-GCTCAGC--ATAGA-GCTA-GCTCA----CACAACTAT--  82

seq1  GAAATACAGTTTTGGAAAGTTGTGAAGTACTCCAAAATCGTGCAAAGATA  149
       | |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  -AGATACAGTTTTGGAAAG-TGTGAAGTACTCCAAAATCGTGCAAAGATA  130

seq1  AACATCAAAGTTACTTTAATCTGGAACTACTGACTCTTACATGACAGAGG  199
      |||||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  AACATCAAAGTTAC-TTAATCTGGAACTACTGACTC-TACATGACAGAGG  178

seq1  TACAACATTACCATGGAAAATAGACCCTGGAATACAATGTGTCCACTTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACATTACCATGGAAAATAGACCCTGGAATACAATGTGTCCACTTTC  228

seq1  ATGGTTAAACCTGAGAATCATGTGGGCTGTAATTTTAATCCTGAAATACA  299
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAAACGTGAGAATCATGTGGGCTGTAATTTTAATCCTGAAATACA  278

seq1  GCATAACACAGCAAAGAACACTCCCTACAGGATATTGACCAGAAGCCTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAACACAGCAAAGAACACTCCCTACAGGATATTGACCAGAAGCCTCA  328

seq1  ACAAACAAGGAATTTACATACTGTTGTCTTAACAGTCCCTTAATAAATAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGGAATTTACATACTGTTGTCTTAACAGTCCCTTAATAAATAT  378

seq1  TGTCTCCTAAATATGAATGTTATTAGCACTACATTCAAGAGAAAACTAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTAAATATGAATGTTATTAGCACTACATTCAAGAGAAAACTAAA  428

seq1  TCTCATGAGTTGCCTGTTTCAAATGTTTTGCTTCAAGACAACACTTAGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGAGTTGCCTGTTTCAAATGTTTTGCTTCAAGACAACACTTAGCA  478

seq1  TGTGTGTGTTATTAAACTGATAAGAACAGATACTATGCTTGATCTTAGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTATTAAACTGATAAGAACAGATACTATGCTTGATCTTAGCA  528

seq1  AAAAGACCAGGAAGCAATGGTATGTGGATTCTATGCTATGCCATCACTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACCAGGAAGCAATGGTATGTGGATTCTATGCTATGCCATCACTGC  578

seq1  TAGCCTTATAGAATTTCTTAAACTATAGACTATTTGATTCTTTTAGTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTATAGAATTTCTTAAACTATAGACTATTTGATTCTTTTAGTCTT  628

seq1  GTTTGTTGATGTAGCAGGTACAATTTACATTTTAAAGGTACAATTCTATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGATGTAGCAGGTACAATTTACATTTTAAAGGTACAATTCTATT  678

seq1  ATCAGTGTTATCTGTCCTTAAAATGTGTATAATTGTATACCCTTTATCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTTATCTGTCCTTAAAATGTGTATAATTGTATACCCTTTATCCA  728

seq1  ATACAACAAGCAAAACAAATCTATGCCCCTATTCCCATGAATTCTATTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACAAGCAAAACAAATCTATGCCCCTATTCCCATGAATTCTATTCA  778

seq1  TGCCCCTGTTTGATTTCTCCCTCTCTTCCTGTTACCAGACAAGACTGATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTGTTTGATTTCTCCCTCTCTTCCTGTTACCAGACAAGACTGATT  828

seq1  TGATTCTGCCCTGGTGTGTTCCATTTTTTATGTGTCATATAAATCAATCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTGCCCTGGTGTGTTCCATTTTTTATGTGTCATATAAATCAATCA  878

seq1  TCTAATACATAGTTATTTCAAACTAGCTTTCACTCAACAGGATTACTGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATACATAGTTATTTCAAACTAGCTTTCACTCAACAGGATTACTGTC  928

seq1  TTAGATATCAACACATCGCTACATGCTTCTATAGTCCATTTCCCAGTTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATCAACACATCGCTACATGCTTCTATAGTCCATTTCCCAGTTTG  978

seq1  TCTGAGAACTGTTTCATTTTACGGATAGACTGTAGTTTGGACATCCATCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAACTGTTTCATTTTACGGATAGACTGTAGTTTGGACATCCATCC  1028

seq1  CCCAGCTGAAGAACATTTGAGTTATCCCAGTTTTGACTATTACAAAAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTGAAGAACATTTGAGTTATCCCAGTTTTGACTATTACAAAAAAA  1078

seq1  GACATTATAGCTATTATTATATGCTTTCTCTTGAATGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTATAGCTATTATTATATGCTTTCTCTTGAATGAATTC  1120

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information