BAC Information

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BAC

Clone NameB6Ng01-294H14
Chromosome10 (Build37)
Map Location 21,378,813 - 21,575,220
singlet/doubletdoublet
Overlap geneEG432436, LOC100039936, LOC628133
Upstream genePde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik
Downstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294H14.bB6Ng01-294H14.g
ACCGA090590GA090591
length1,1941,074
definitionB6Ng01-294H14.b B6Ng01-294H14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,378,813 - 21,380,009)(21,574,145 - 21,575,220)
sequence
gaattcattggttttttgctgaggtcccttttcattccttctggtgaggg
tttttataccatgattatctaagactgaataaatgtactccgaagttgtt
tgtctcgctaatgtctatagagaactgaactaatttaaaaagccgtgttc
tcatctagagaaccagagagagagagagagagggagagagagagagagag
agaataaactgaagacctagatttcacctcacaccactgaacagttaatg
gctacttcaagactaaaggatttggggctgatatttaaagtttcctgcct
ccatttcctaatattctctgaaatacatgctacccaagcaagtctcataa
ctgttgacatttctcagattctatgtagagaacagactataaaaaggcat
atcggggatcaaataaaaactgtggaattcatgagtgtatcttaatgagg
atttttcattcagttctcatccctttgtatattctgagctatagtaagca
gagatttatttcccggatgccacccaaacgtctatttcttaagtttaaaa
aagaagaaaagaaagaaagcagacatattcagaagcagatgagccacaca
ggaagttaatgactcaacacttttaacacttgcagtgggttgacttgctc
ttagttcctggcatgggcaaaggtttagttggctctcagtctctccaaaa
caatccccactgtctttggttacatcgtgacggcactcccactactgtgc
cccaaatacccaacactctgccaaagttctattaaagaacacagactgca
agcaaacatgtttgatacccccagacatcacgtgcatatttcttcactgg
tgttgcttgctttatttcttgacgttttctcttagtcaaaggttctctgg
ctcatatgaggctaaacttgaagaaaaccgctcctctttgttgccaggtc
tttgtagcaaaggcatctaataagaacaagcatgctcaatttgctgctat
ctgactcacagcagattgaaacagctgcagaggccatgctagccctcaca
agtggtgatttcttatgaagcatcgaagagccttctgacttagactgaat
ttcttaaaattggcagtctgaactgcttctcattaacctggacgtaagat
aaaagtgcttctctcttgtccgagaacctgaagggtgtttctgc
gaattcatacaccaccaacaaaccacagaaggaaggggaacgttccaggc
agagggctaacatgagtaagagcccaaagtaagtggcttgtcgtaggggt
tcaacaccattgaagaacactgcggggtggagcgagccaggaagtgagag
cagaggatggaaggatgcaggctggcccgaggatgcctttggctgatagt
gaggcagctctgtagatggttataaccacaggaggttctaaaatccttct
tgtacttttgagaacagcccccagctgagaggtactatgagtttcttaga
aaattgcgttggctagggtcagcaagatgggtcagcgggtgaaaacatga
gctgctaagcctgaggatttgagtttgatcacatggtggaaggaaagagt
tgacacccacatgccgtcctctggcttccacagtcaccttggcatgtgct
catatgtgggatgtgcacacagatatgaacatgtgcactcacgcgtgcac
acatacacacacacacacacacatattttggctataaactgatgggcact
ttgtactttcttaggtatcaaaatcagaccaagtcacagggcataagtgt
ctgggaataagtccaggaaatatcagataggaagtgggaaaggaaggagg
gaaaagagacattagtaaaaggtgtgttaatgaggtgggtaacaacggta
aggggaaatgtctagcacagcggttctcaaccttcccaatgccatgaccc
tttaattagtccctcatgttggggttacctcccaaccataaaattatttt
tgttgctccttcataactgtagttttgatacaaatatgaatcataatgta
aatacctgacacactgcaagcaggttgagaaccgctggcctagcagtctt
caggattaccacacacagggcctagaaactggagcttccactcctgttca
ggttcgggctgaagccacatgaagatggatgtccatttgtggtgcttctg
ggtatgttaactgtgaatagcatacatgagcatcagcacagagaaaataa
ggaaagatggcagaattgtggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21378813_21380009
seq2: B6Ng01-294H14.b_46_1239

seq1  GAATTCATTGGTTTTTTGCTGAGGTCCCTTTTCATTCCTTCTGGTGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGTTTTTTGCTGAGGTCCCTTTTCATTCCTTCTGGTGAGGG  50

seq1  TTTTTATACCATGATTATCTAAGACTGAATAAATGTACTCCGAAGTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATACCATGATTATCTAAGACTGAATAAATGTACTCCGAAGTTGTT  100

seq1  TGTCTCGCTAATGTCTATAGAGAACTGAACTAATTTAAAAAGCCGTGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCGCTAATGTCTATAGAGAACTGAACTAATTTAAAAAGCCGTGTTC  150

seq1  TCATCTAGAGAACCAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTAGAGAACCAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAG  200

seq1  AGAATAAACTGAAGACCTAGATTTCACCTCACACCACTGAACAGTTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAACTGAAGACCTAGATTTCACCTCACACCACTGAACAGTTAATG  250

seq1  GCTACTTCAAGACTAAAGGATTTGGGGCTGATATTTAAAGTTTCCTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTCAAGACTAAAGGATTTGGGGCTGATATTTAAAGTTTCCTGCCT  300

seq1  CCATTTCCTAATATTCTCTGAAATACATGCTACCCAAGCAAGTCTCATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCTAATATTCTCTGAAATACATGCTACCCAAGCAAGTCTCATAA  350

seq1  CTGTTGACATTTCTCAGATTCTATGTAGAGAACAGACTATAAAAAGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGACATTTCTCAGATTCTATGTAGAGAACAGACTATAAAAAGGCAT  400

seq1  ATCGGGGATCAAATAAAAACTGTGGAATTCATGAGTGTATCTTAATGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGGATCAAATAAAAACTGTGGAATTCATGAGTGTATCTTAATGAGG  450

seq1  ATTTTTCATTCAGTTCTCATCCCTTTGTATATTCTGAGCTATAGTAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATTCAGTTCTCATCCCTTTGTATATTCTGAGCTATAGTAAGCA  500

seq1  GAGATTTATTTCCCGGATGCCACCCAAACGTCTATTTCTTAAGTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTATTTCCCGGATGCCACCCAAACGTCTATTTCTTAAGTTTAAAA  550

seq1  AAGAAGAAAAGAAAGAAAGCAGACATATTCAGAAGCAGATGAGCCACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAAGAAAGAAAGCAGACATATTCAGAAGCAGATGAGCCACACA  600

seq1  GGAAGTTAATGACTCAACACTTTTAACACTTGCAGTGGGTTGACTTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTAATGACTCAACACTTTTAACACTTGCAGTGGGTTGACTTGCTC  650

seq1  TTAGTTCCTGGCATGGGCAAAGGTTTAGTTGGCTCTCAGTCTCTCCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCCTGGCATGGGCAAAGGTTTAGTTGGCTCTCAGTCTCTCCAAAA  700

seq1  CAATCCCCACTGTCTTTGGTTACATCGTGACGGCACTCCCACTACTGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCCCACTGTCTTTGGTTACATCGTGACGGCACTCCCACTACTGTGC  750

seq1  CCCAAATACCCAACACTCTGCCAAAGTTCTATTAAAGAACACAGACTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATACCCAACACTCTGCCAAAGTTCTATTAAAGAACACAGACTGCA  800

seq1  AGCAAACATGTTTGATACCCCCAGACATCACGTGCATATTTCTTCACTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACATGTTTGATACCCCCAGACATCACGTGCATATTTCTTCACTGG  850

seq1  TGTTGCTTGCTTTATTTCTTGACGTTTTCTCTTAGTCAAAGGTTCTCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTGCTTTATTTCTTGACGTTTTCTCTTAGTCAAAGGTTCTCTGG  900

seq1  CTCATATGAGGCTAAACTTGAAGAAAACCGCTCCTCTTTGTTGCCAGGTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATGAGGCTAAACTTGAAGAAAACCGCTCCTCTTTGTTGCCAGGTC  950

seq1  TTTGTAGCAAAGGCATCTATAAAGAACAAGCATGCTCCATTTGCTGCCTA  1000
      |||||||||||||||||||  |||||||||||||||| |||||||| |||
seq2  TTTGTAGCAAAGGCATCTAATAAGAACAAGCATGCTCAATTTGCTG-CTA  999

seq1  TCTGACTCACAGCAGATTGAAACAGCTGCAGAGGCCATGCCAGCCCTCAC  1050
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGACTCACAGCAGATTGAAACAGCTGCAGAGGCCATGCTAGCCCTCAC  1049

seq1  AAGT-GTGATTTCTTATGAAGCATCG-AGAGCC-TCTGACCTTTAGACTG  1097
      |||| ||||||||||||||||||||| |||||| ||||||  ||||||||
seq2  AAGTGGTGATTTCTTATGAAGCATCGAAGAGCCTTCTGAC--TTAGACTG  1097

seq1  AAATTCTTAAAATTTGCAGTCTGAAACCTGCTTCTCCATTAACCTGGCAC  1147
      || ||||||||||| ||||||||||  |||||||| ||||||||||| ||
seq2  AATTTCTTAAAATTGGCAGTCTGAA--CTGCTTCT-CATTAACCTGG-AC  1143

seq1  GTAAGGATAAAAGTTGCTTCT-TCTTGCCCGAGAGCCTGAA-GGTG-TTC  1194
      |||| |||||||| ||||||| ||||| |||||| |||||| |||| |||
seq2  GTAA-GATAAAAG-TGCTTCTCTCTTGTCCGAGAACCTGAAGGGTGTTTC  1191

seq1  TGC  1197
      |||
seq2  TGC  1194

seq1: chr10_21574145_21575220
seq2: B6Ng01-294H14.g_65_1138 (reverse)

seq1  TCTCCACA--TCTGCCATCCCTTCCTTTATTTTCTCTGTGCCTGATGCTC  48
      ||||||||  ||||||||  ||| | |||||||||||||| |||||||||
seq2  TCTCCACAATTCTGCCAT--CTTTCCTTATTTTCTCTGTG-CTGATGCTC  47

seq1  ATGTTATGCTATTCACAGTTAACATA-CCAGAAGCACCACAAATGGAACA  97
      ||| |||||||||||||||||||||| ||||||||||||||||||| |||
seq2  ATG-TATGCTATTCACAGTTAACATACCCAGAAGCACCACAAATGG-ACA  95

seq1  TCCATC-TCATGTGGCCTTCAGCCCGACCCTG-ACAGGAGTTGGAGGCTC  145
      |||||| |||||||| ||||||||||| |||| ||||||| |||| ||||
seq2  TCCATCTTCATGTGG-CTTCAGCCCGAACCTGAACAGGAG-TGGAAGCTC  143

seq1  CAGTTTCTAGGCCCTGTGTGTGGTAATCCTGAGACCTGCTAGGCCAGCGG  195
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  CAGTTTCTAGGCCCTGTGTGTGGTAATCCTGAAGACTGCTAGGCCAGCGG  193

seq1  TTCTCAACCTGCTTGCAGTGTGTCAGGTATTTACATTATGATTCATATTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACCTGCTTGCAGTGTGTCAGGTATTTACATTATGATTCATATTT  243

seq1  GTATCAAAACTACAGTTATGAAGGAGCAACAAAAATAATTTTATGGTTGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAACTACAGTTATGAAGGAGCAACAAAAATAATTTTATGGTTGG  293

seq1  GAGGTAACCCCAACATGAGGGACTAATTAAAGGGTCATGGCATTGGGAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAACCCCAACATGAGGGACTAATTAAAGGGTCATGGCATTGGGAAG  343

seq1  GTTGAGAACCGCTGTGCTAGACATTTCCCCTTACCGTTGTTACCCACCTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAACCGCTGTGCTAGACATTTCCCCTTACCGTTGTTACCCACCTC  393

seq1  ATTAACACACCTTTTACTAATGTCTCTTTTCCCTCCTTCCTTTCCCACTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACACACCTTTTACTAATGTCTCTTTTCCCTCCTTCCTTTCCCACTT  443

seq1  CCTATCTGATATTTCCTGGACTTATTCCCAGACACTTATGCCCTGTGACT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTGATATTTCCTGGACTTATTCCCAGACACTTATGCCCTGTGACT  493

seq1  TGGTCTGATTTTGATACCTAAGAAAGTACAAAGTGCCCATCAGTTTATAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGATTTTGATACCTAAGAAAGTACAAAGTGCCCATCAGTTTATAG  543

seq1  CCAAAATATGTGTGTGTGTGTGTGTGTATGTGTGCACGCGTGAGTGCACA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATATGTGTGTGTGTGTGTGTGTATGTGTGCACGCGTGAGTGCACA  593

seq1  TGTTCATATCTGTGTGCACATCCCACATATGAGCACATGCCAAGGTGACT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATATCTGTGTGCACATCCCACATATGAGCACATGCCAAGGTGACT  643

seq1  GTGGAAGCCAGAGGACGGCATGTGGGTGTCAACTCTTTCCTTCCACCATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGCCAGAGGACGGCATGTGGGTGTCAACTCTTTCCTTCCACCATG  693

seq1  TGATCAAACTCAAATCCTCAGGCTTAGCAGCTCATGTTTTCACCCGCTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAAACTCAAATCCTCAGGCTTAGCAGCTCATGTTTTCACCCGCTGA  743

seq1  CCCATCTTGCTGACCCTAGCCAACGCAATTTTCTAAGAAACTCATAGTAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCTTGCTGACCCTAGCCAACGCAATTTTCTAAGAAACTCATAGTAC  793

seq1  CTCTCAGCTGGGGGCTGTTCTCAAAAGTACAAGAAGGATTTTAGAACCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCTGGGGGCTGTTCTCAAAAGTACAAGAAGGATTTTAGAACCTC  843

seq1  CTGTGGTTATAACCATCTACAGAGCTGCCTCACTATCAGCCAAAGGCATC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTATAACCATCTACAGAGCTGCCTCACTATCAGCCAAAGGCATC  893

seq1  CTCGGGCCAGCCTGCATCCTTCCATCCTCTGCTCTCACTTCCTGGCTCGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGCCAGCCTGCATCCTTCCATCCTCTGCTCTCACTTCCTGGCTCGC  943

seq1  TCCACCCCGCAGTGTTCTTCAATGGTGTTGAACCCCTACGACAAGCCACT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCCGCAGTGTTCTTCAATGGTGTTGAACCCCTACGACAAGCCACT  993

seq1  TACTTTGGGCTCTTACTCATGTTAGCCCTCTGCCTGGAACGTTCCCCTTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGGCTCTTACTCATGTTAGCCCTCTGCCTGGAACGTTCCCCTTC  1043

seq1  CTTCTGTGGTTTGTTGGTGGTGTATGAATTC  1076
      |||||||||||||||||||||||||||||||
seq2  CTTCTGTGGTTTGTTGGTGGTGTATGAATTC  1074