BAC Information

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BAC

Clone NameB6Ng01-294M12
Chromosome10 (Build37)
Map Location 101,012,747 - 101,013,887
singlet/doubletsinglet
Overlap genenone
Upstream gene4930430F08Rik, 1700017N19Rik
Downstream geneMgat4c, LOC667652, Nts, Pamci
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294M12.bB6Ng01-294M12.g
ACCGA090821GA090822
length1,2201,122
definitionB6Ng01-294M12.b B6Ng01-294M12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgcttttaattgctgagtagtactccattgtgtaaatgtatc
acattttctgtatccgttccactgttgagggacatttgggttctttccag
cttctgattattataaataaggcttgtatgagcatgagtatgtgtcctta
ttacaagttggaacatattctggatatatgcccaggagaggaattgttgg
atcttctggtaacactatgtccagttttctgaggaaccaccagactgatt
tccagagtggttgtaccagcttgcaatcccaccaacaacggaggagtgtc
cctctttcttcacattcttaacagcatctgctgtcacctgaattttttat
cttagccattctgactggtgtgaggtggaatctcaggatatcatcttgag
tgaggtaacccaatcacaaaagaacactcatgatttgcactcactgataa
gtggctattagcccagaaacttagacttcccaagaaacaatttggaaaac
acatgaaactcaaggaagaccaaagtgtggatacttcgatacgtcttaga
atgtggaacaaaatacccagggaaggagttacagagacaaagtttggatc
tgagacagaaggcaggatcatccagagactgcctcacccagggatccatc
ccatatacaaccaccaaacccagacactattacatatgccagaaagattt
tgctgacaggaccctaacatagatttctcttgtgaggctataccaatgtc
tggcaaatacagaagtggaagctcacagtcatctattggatggaacacag
ggcccctaattaaggagctagagaaagtacccaaggagctgaaggggtct
gcaacactataagaggaacaacaatatgaactaaccagtaccctccaaga
gctgtgtctagttgcatatgtagcagaggatgggcctagccagccatcaa
tggggaggagaattcccttgggtcttgtgcagatcatatgcccccgtaca
gggaatgccagggccaggattcccggagtgtgtgggttgggggagcaagc
agcggagggtatagggggcctttggtgatgcattttgaaatataatgaag
aaaaaatcctacaaaagaggcaatgaccaggtatgacctctttctccttc
gacaatgaaattttaactaatctttaattccaaaacggaaggcttgaagg
catactcccagtatcttcag
gaattcaagagtaaagaaccacgagtgtaaaaagaaagtcatgctatttg
atatttgttaatcaccaaaaaaggaaaatgatatatttgtatagaaggaa
attgagaaaattttgttcattagtatcagacgtagatcagatgcaggaaa
aaactgtgtatgctatgtaagtctataatttttaaaacaatagtttattg
ggcttttttgtaaagaggcacattaaaattagagaaaacaggatattaac
tttgaagagctgatagctgttcataactaaactacaatgatgagaaattg
taatgagagatagtaaagaatttagccagatgcatagatgatgctgaaat
cccagcaaggtttgacccatgaaagtacaagcaatctagtatctgatgat
gccaaaccataaagaaaaagccagaagttttctgctcagtattggaagat
agaattttaaacttgaagttctctttagtgatggcaaatcagaagcaaaa
tcagactgaggagttcattgagtttcaaaggtttaggaaaataataggct
tggcagataattcatttggatgttgaaatcctataaagcaattgtaggtt
ggtaatgtatatgaaatgctatggcaaatgacagaatgaggaatggtatg
ggcgacaccatcagatgtcaaatgacccataaaggaataaaagtggagaa
ataatgtggtctggaaacctaatcctgggttaggtttatgagtcaaccac
attgctcatatttcaatctgtcagtgtaacattattatttgtgctacgtg
agaaagggagtgtttcaagaacagctgaggcaccgggggctgtggagatg
gatcaagttgccctcaagtttctgactttgtctatctttaacttatgcag
agttttttgtttgttgtttttgtttgtttgtttgatcttagttttgagca
ggaactgatacacctagtactttttcaatgaagaaagtgcaaaacattat
aaagtcaacatttttaaatgtgcatatgtggtctggagcgtgtttatgtc
acatgtggcgtgtgtggtgcatggtgtaggaacctaagatgaaattcagt
aggccttcctcatcatcctgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101012747_101013887
seq2: B6Ng01-294M12.g_66_1187

seq1  GAATTCAAGAGTAAAGAACCACGAGTGTAAAAAGAAAGTCATGCTATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGTAAAGAACCACGAGTGTAAAAAGAAAGTCATGCTATTTG  50

seq1  ATATTTGTTAATCACCAAAAAAGGAAAATGATATATTTGTATAGAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTAATCACCAAAAAAGGAAAATGATATATTTGTATAGAAGGAA  100

seq1  ATTGAGAAAATTTTGTTCATTAGTATCAGACGTAGATCAGATGCAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAAAATTTTGTTCATTAGTATCAGACGTAGATCAGATGCAGGAAA  150

seq1  AAACTGTGTATGCTATGTAAGTCTATAATTTTTAAAACAATAGTTTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTGTATGCTATGTAAGTCTATAATTTTTAAAACAATAGTTTATTG  200

seq1  GGCTTTTTTGTAAAGAGGCACATTAAAATTAGAGAAAACAGGATATTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTTGTAAAGAGGCACATTAAAATTAGAGAAAACAGGATATTAAC  250

seq1  TTTGAAGAGCTGATAGCTGTTCATAACTAAACTACAATGATGAGAAATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGAGCTGATAGCTGTTCATAACTAAACTACAATGATGAGAAATTG  300

seq1  TAATGAGAGATAGTAAAGAATTTAGCCAGATGCATAGATGATGCTGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGAGATAGTAAAGAATTTAGCCAGATGCATAGATGATGCTGAAAT  350

seq1  CCCAGCAAGGTTTGACCCATGAAAGTACAAGCAATCTAGTATCTGATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAAGGTTTGACCCATGAAAGTACAAGCAATCTAGTATCTGATGAT  400

seq1  GCCAAACCATAAAGAAAAAGCCAGAAGTTTTCTGCTCAGTATTGGAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACCATAAAGAAAAAGCCAGAAGTTTTCTGCTCAGTATTGGAAGAT  450

seq1  AGAATTTTAAACTTGAAGTTCTCTTTAGTGATGGCAAATCAGAAGCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTAAACTTGAAGTTCTCTTTAGTGATGGCAAATCAGAAGCAAAA  500

seq1  TCAGACTGAGGAGTTCATTGAGTTTCAAAGGTTTAGGAAAATAATAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTGAGGAGTTCATTGAGTTTCAAAGGTTTAGGAAAATAATAGGCT  550

seq1  TGGCAGATAATTCATTTGGATGTTGAAATCCTATAAAGCAATTGTAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGATAATTCATTTGGATGTTGAAATCCTATAAAGCAATTGTAGGTT  600

seq1  GGTAATGTATATGAAATGCTATGGCAAATGACAGAATGAGGAATGGTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGTATATGAAATGCTATGGCAAATGACAGAATGAGGAATGGTATG  650

seq1  GGCGACACCATCAGATGTCAAATGACCCATAAAGGAATAAAAGTGGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACACCATCAGATGTCAAATGACCCATAAAGGAATAAAAGTGGAGAA  700

seq1  ATAATGTGGTCTGGAAACCTAATCCTGGGTTAGGTTTATGAGTCAACCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTGGTCTGGAAACCTAATCCTGGGTTAGGTTTATGAGTCAACCAC  750

seq1  ATTGCTCATATTTCAATCTGTCAGTGTAACATTATTATTTGTGCTACGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCATATTTCAATCTGTCAGTGTAACATTATTATTTGTGCTACGTG  800

seq1  AGAAAGGGAGTGTTTCAAAGAACAGCTGAGGCACCGGGGGCTGTGGAGAT  850
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGAAAGGGAGTGTTTC-AAGAACAGCTGAGGCACCGGGGGCTGTGGAGAT  849

seq1  GGATCAAGTTGCCCTCAAGTTTCTGACTTTGTCTATCTTTAACTTATGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGTTGCCCTCAAGTTTCTGACTTTGTCTATCTTTAACTTATGCA  899

seq1  GAAGTTTTTTTGTTTGTTTGTTTTTTGTTTTGTTTTGTTTTGTATTCTTT  950
      ||   |||||||||||||   |||||||||   |||||||  |     ||
seq2  GA--GTTTTTTGTTTGTT--GTTTTTGTTT--GTTTGTTTGAT----CTT  939

seq1  AGTTTTTGAGCCAGGAAAACCTGATACACCTAGTAACTTTTTCAATGAAA  1000
      || ||||||| ||||||   |||||||||||||| |||||||||||| ||
seq2  AG-TTTTGAG-CAGGAA---CTGATACACCTAGT-ACTTTTTCAATG-AA  982

seq1  GAAAGTGCAAAAACATTATAAAAGTTCAACATTTTTAAATGTGCATATGT  1050
      |||||||| |||||||||||||   |||||||||||||||||||||||||
seq2  GAAAGTGC-AAAACATTATAAA--GTCAACATTTTTAAATGTGCATATGT  1029

seq1  GGTCT-GAGCGTGTTTATGTTCACATGT-GCGTGTGTGGTGCCATGTGTA  1098
      ||||| ||||||||||||| |||||||| |||||||||||||   |||||
seq2  GGTCTGGAGCGTGTTTATG-TCACATGTGGCGTGTGTGGTGCATGGTGTA  1078

seq1  -GAACTAAGGATGATA-TCAGTA-GTCTTCCTCAATCACTCCTGAC  1141
       ||||  | ||||| | |||||| | ||||||| |||| |||||||
seq2  GGAACCTAAGATGAAATTCAGTAGGCCTTCCTC-ATCA-TCCTGAC  1122