BAC Information

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BAC

Clone NameB6Ng01-295C07
Chromosome10 (Build37)
Map Location 121,430,085 - 121,431,207
singlet/doubletsinglet
Overlap geneSrgap1
Upstream geneWif1, LOC100042911, 4930505D03Rik, LOC100043498, Gns, Rassf3, LOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403
Downstream geneEG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a, Ppm1h, D630033A02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295C07.bB6Ng01-295C07.g
ACCGA091089GA091090
length1,1241,167
definitionB6Ng01-295C07.b B6Ng01-295C07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcccagctgacctccccaggcaccttgagaatccactgagat
ggtgagatggcatgtctgtggtgttggctgtgcagcaggccctcaggaag
gggaggggctgcctcccatttctcttctctctcctctctgtagctcacca
actagggatgatacgagatggcatcgtgccattctccctggaaatgtatg
ggtacgagacttccctggcacatctgaccaaactacagaactaactatag
cattctaaattgcttgatgctttaaagtggggcgtggaagaaatggatca
gaggaaaacttccagaagaattcaaggagttcaaaggcaccagtaaataa
taataataataataataataataataataataataaaattaaaaataaat
aaataaataaaaactaccaggcaaagtgataaattctttctttaatgaca
acaacattccattccctggttttatagatgagaagacattcaatcaagta
actcactcaagttatgaaggagtagagacttgatttgaatgtcaaggttt
gtgacccaagaattccacagagtaagcatgtcctgttgtcttgtttggcc
tggtagaccaagcatctgtctattcacccccaagtatcgcctgtatgtgc
cacgtatgcttgaggcctgtgcacactgtggtggacaagaacaaagacgc
cacagctggaagtttatattctgctaggggaggcaagacaaacaagaaaa
tgaataagccagcatgaccgagacaaggagaggcggagggaagacaaaca
ctttttttttccccatatatactttgcagattgatatacactatcatgga
aatgaaattcctggaaagggagctgtaatttttatatattcaaggggaaa
ataatctaaaactcacctatgactgtaaatttttcctcgtattgattcga
ctgttactttttaggctttcttattgggttattatagaatgcagatgtgt
ttaaactataaagcatgacaggttaaatattctatgtgccaccgcctcgt
ctcaggtgtgaacagtcctgctgaactaactgtgttctgtcttcccaact
gggcgcaacgctcccatacgtttt
gaattccacctgaacagaggcacaggttccatcaggtctgagcagacctg
ggcgcaaacttcacagccagtcccacaacactcagaagaagttccactcc
caggagctctaacatgcccaggttcacaggatcccagaacccaaggagct
tggtcacaacagatctcagggtcccagaggcagcttgactcccaggagct
ctgacacacctaggatctcaggatcacaggattccagaatcacaggatga
caaagatagctgaagtctgaggagttctgacacagccaggatcacagaaa
ggatagagagggcaggcagcactagagataatcagatggcaggaggcaag
cataagaacataagcaaccgaaaccaaggttacttgtcatcatcagaacc
caagtctcctaccatggtaagtcctggatatatgatcatacagaaaagca
agattggattgaaagtcacttctcacgatggtgctagaggactttaagaa
ggacataaatagctcgcttaaagaaatacaagagaacacaggtaaacaga
agcccttaaagaggaaacacaaaaattccttaaagaattacaggaaaaca
taattaaacaggcaaaagaaatgaacaaaaccatctaagatctaaaaata
gaaatagaaacaataaagaaatcacaaagggattaaccctggagttaaaa
acctaggaaagagatcaggagtcatagatgcaagcatcatcaacagaata
caagagatagaagagagaaatctcagtgcagaaagataccatagaaaaca
ttgacacaaaagtcaaagaaaatgcaaaaggcaaaaaagctcctaaccca
aaacacccaggaaattcatgacacaacgagaagaccaaacctaaggataa
taggtatagaagagagcaaagattcccaacttaagggcagtttaatatct
tcacaaattatagaagaaacttccctaacctaagaaagagatgcccatga
catacagaagcctacagactcaaatagactgggcagaaaagaaattcctc
ccatcacatattatcaaacaccaatgcactaagaaaaagatataaagcag
ttaggtaaacgtcagtacattgaaggcagcctatccgaattacacccgaa
ctctctctctaatatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_121430085_121431207
seq2: B6Ng01-295C07.b_46_1169 (reverse)

seq1  AAAAAGTATGGGGAGC-TGTCGCCCAGTGGGAAGGACAGAACACAGTTAA  49
      |||| |||| |||||| |  |||||||| || | ||||||||||||||| 
seq2  AAAACGTAT-GGGAGCGTTGCGCCCAGTTGGGAAGACAGAACACAGTTAG  49

seq1  GTCAGCAGAACTGGTCACACCTGAGACGAGGCGGTGGGCACATAG-ATAT  98
       ||||||| |||| ||||||||||||||||||||| ||||||||| ||||
seq2  TTCAGCAGGACTGTTCACACCTGAGACGAGGCGGT-GGCACATAGAATAT  98

seq1  TTACCCTGTCATGCTTTATAGTTTAAACACATCTGCATTCTATAATAACC  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTGTCATGCTTTATAGTTTAAACACATCTGCATTCTATAATAACC  148

seq1  CAATAAGAAAGCCTAAAAAGTAACAGTCGAATCAATACGAGGAAAAATTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGAAAGCCTAAAAAGTAACAGTCGAATCAATACGAGGAAAAATTT  198

seq1  ACAGTCATAGGTGAGTTTTAGATTATTTTCCCCTTGAATATATAAAAATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCATAGGTGAGTTTTAGATTATTTTCCCCTTGAATATATAAAAATT  248

seq1  ACAGCTCCCTTTCCAGGAATTTCATTTCCATGATAGTGTATATCAATCTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCCCTTTCCAGGAATTTCATTTCCATGATAGTGTATATCAATCTG  298

seq1  CAAAGTATATATGGGG-AAAAAAAAGTGTTTGTCTTCCCTCCGCCTCTCC  347
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAAAGTATATATGGGGAAAAAAAAAGTGTTTGTCTTCCCTCCGCCTCTCC  348

seq1  TTGTCTCGGTCATGCTGGCTTATTCATTTTCTTGTTTGTCTTGCCTCCCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCGGTCATGCTGGCTTATTCATTTTCTTGTTTGTCTTGCCTCCCC  398

seq1  TAGCAGAATATAAACTTCCAGCTGTGGCGTCTTTGTTCTTGTCCACCACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAATATAAACTTCCAGCTGTGGCGTCTTTGTTCTTGTCCACCACA  448

seq1  GTGTGCACAGGCCTCAAGCATACGTGGCACATACAGGCGATACTTGGGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCACAGGCCTCAAGCATACGTGGCACATACAGGCGATACTTGGGGG  498

seq1  TGAATAGACAGATGCTTGGTCTACCAGGCCAAACAAGACAACAGGACATG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGACAGATGCTTGGTCTACCAGGCCAAACAAGACAACAGGACATG  548

seq1  CTTACTCTGTGGAATTCTTGGGTCACAAACCTTGACATTCAAATCAAGTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCTGTGGAATTCTTGGGTCACAAACCTTGACATTCAAATCAAGTC  598

seq1  TCTACTCCTTCATAACTTGAGTGAGTTACTTGATTGAATGTCTTCTCATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCCTTCATAACTTGAGTGAGTTACTTGATTGAATGTCTTCTCATC  648

seq1  TATAAAACCAGGGAATGGAATGTTGTTGTCATTAAAGAAAGAATTTATCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACCAGGGAATGGAATGTTGTTGTCATTAAAGAAAGAATTTATCA  698

seq1  CTTTGCCTGGTAGTTTTTATTTATTTATTTATTTTTAATTTTATTATTAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTGGTAGTTTTTATTTATTTATTTATTTTTAATTTTATTATTAT  748

seq1  TATTATTATTATTATTATTATTATTATTATTTACTGGTGCCTTTGAACTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTATTATTATTATTATTATTATTTACTGGTGCCTTTGAACTC  798

seq1  CTTGAATTCTTCTGGAAGTTTTCCTCTGATCCATTTCTTCCACGCCCCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATTCTTCTGGAAGTTTTCCTCTGATCCATTTCTTCCACGCCCCAC  848

seq1  TTTAAAGCATCAAGCAATTTAGAATGCTATAGTTTGTTCTGTAGTTTGGT  897
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTAAAGCATCAAGCAATTTAGAATGCTATAGTTAGTTCTGTAGTTTGGT  898

seq1  CAGATGTGCCAGGGAAGTCTCGTACCCATACATTTCCAGGGAGAATGGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGCCAGGGAAGTCTCGTACCCATACATTTCCAGGGAGAATGGCA  948

seq1  CGATGCCATCTCGTATCATCCCTAGTTGGTGAGCTACAGAGAGGAGAGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGCCATCTCGTATCATCCCTAGTTGGTGAGCTACAGAGAGGAGAGAG  998

seq1  AAGAGAAATGGGAGGCAGCCCCTCCCCTTCCTGAGGGCCTGCTGCACAGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAATGGGAGGCAGCCCCTCCCCTTCCTGAGGGCCTGCTGCACAGC  1048

seq1  CAACACCACAGACATGCCATCTCACCATCTCAGTGGATTCTCAAGGTGCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCACAGACATGCCATCTCACCATCTCAGTGGATTCTCAAGGTGCC  1098

seq1  TGGGGAGGTCAGCTGGGAAGGAATTC  1123
      ||||||||||||||||||||||||||
seq2  TGGGGAGGTCAGCTGGGAAGGAATTC  1124