BAC Information

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BAC

Clone NameB6Ng01-296C14
Chromosome10 (Build37)
Map Location 15,204,925 - 15,206,083
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC637043, LOC100039492, LOC671439, LOC382457
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296C14.bB6Ng01-296C14.g
ACCGA091841GA091842
length1,2161,150
definitionB6Ng01-296C14.b B6Ng01-296C14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttaaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttgtggctattgagaaggtgttgttttccctaatttctttctcagcctgt
ttatttcttttgtgtagagaaaggccattgacttgtttgagtttaatttt
tattatccagctacttcaccgaagctgttttattcaagtttaagagtctc
tggtggattttttagggtcacttatatataactatcatattcatctgcaa
aagtgatattttgcaccttccctcttttccaattttggatttccctcttg
tgatatcctcctcatg

gaattcctcaaaattgttcctggaatgtgtttttgttttccttccagatg
tagaggataagagcatgtttacttcaggttgtgtgttatttcttgcagtt
gttattcattaaattaaatgtttaaactatacttattttttatgtaaaag
tatttttgccacctgtgatttgtctttgtgattgtatacagcttgaagtc
ttaggaacttcacttgtttgacctttcttaacccagcatattttttcttc
tattggaaattttttttctcattaatatacatggcttatagttttccctt
cctctgctcctcctaattcctctccagttttgctctcatgaaattcccct
gctttctgtcttttattagaaaacaaacaaacttctatgaaataataaat
tataatgagatagaacaaaacctaacatattagaatagtacaaaacaaag
agaaagaaaaaggacaaagtaaagacacagatatagatgcagaaatctat
tttctttcacataaaatattaaattgtaatccataatatatatgcaaagg
aactgtagggtaaaaacagataaaatatatacaattaaataaaagtaaaa
aagagagataaaagaaagaataaaaacaaaagaaagaaggaaagatataa
agaaggaaagaaagcaagggagaaagaaagagcccagaaacaacaatatg
tgggaaaaaacttgcaaatatccagctgagtaattttgggggtaggagct
catattgctgagcatgacaccggcccaaaacttagttgcttcttcagtga
cactccctggtcttttttcttttattctttttatttttttaaacaaaatt
tattggtcattttatttatttacatgtctaatgttatcatccttcctagt
tttacatccacaaatgccctatcccacccccatccccgcaagaagattct
ctcccacccacccatctactacgcttaccaccctagcattgccctaggct
agagcataaagccttcacaggatgacgacctctacactgatggatgtcag
gatagtcataccctgcctatgtctgccagcttgaagcaatgggttcatca
atgtggttttgtgtgatttgtgaactgttccatgaggagattcagaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_15204925_15206083
seq2: B6Ng01-296C14.g_68_1217

seq1  GAATTCCTCAAAATTGTTCCTGGAATGTGTTTTTGTTTTCCTTCCAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAAAATTGTTCCTGGAATGTGTTTTTGTTTTCCTTCCAGATG  50

seq1  TAGAGGATAAGAGCATGTTTACTTCAGGTTGTGTGTTATTTCTTGCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGATAAGAGCATGTTTACTTCAGGTTGTGTGTTATTTCTTGCAGTT  100

seq1  GTTATTCATTAAATTAAATGTTTAAACTATACTTATTTTTTATGTAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCATTAAATTAAATGTTTAAACTATACTTATTTTTTATGTAAAAG  150

seq1  TATTTTTGCCACCTGTGATTTGTCTTTGTGATTGTATACAGCTTGAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGCCACCTGTGATTTGTCTTTGTGATTGTATACAGCTTGAAGTC  200

seq1  TTAGGAACTTCACTTGTTTGACCTTTCTTAACCCAGCATATTTTTTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAACTTCACTTGTTTGACCTTTCTTAACCCAGCATATTTTTTCTTC  250

seq1  TATTGGAAATTTTTTTTCTCATTAATATACATGGCTTATAGTTTTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAAATTTTTTTTCTCATTAATATACATGGCTTATAGTTTTCCCTT  300

seq1  CCTCTGCTCCTCCTAATTCCTCTCCAGTTTTGCTCTCATGAAATTCCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCTCCTCCTAATTCCTCTCCAGTTTTGCTCTCATGAAATTCCCCT  350

seq1  GCTTTCTGTCTTTTATTAGAAAACAAACAAACTTCTATGAAATAATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTGTCTTTTATTAGAAAACAAACAAACTTCTATGAAATAATAAAT  400

seq1  TATAATGAGATAGAACAAAACCTAACATATTAGAATAGTACAAAACAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGAGATAGAACAAAACCTAACATATTAGAATAGTACAAAACAAAG  450

seq1  AGAAAGAAAAAGGACAAAGTAAAGACACAGATATAGATGCAGAAATCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAAAGGACAAAGTAAAGACACAGATATAGATGCAGAAATCTAT  500

seq1  TTTCTTTCACATAAAATATTAAATTGTAATCCATAATATATATGCAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCACATAAAATATTAAATTGTAATCCATAATATATATGCAAAGG  550

seq1  AACTGTAGGGTAAAAACAGATAAAATATATACAATTAAATAAAAGTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAGGGTAAAAACAGATAAAATATATACAATTAAATAAAAGTAAAA  600

seq1  AAGAGAGATAAAAGAAAGAATAAAAACAAAAGAAAGAAGGAAAGATATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGATAAAAGAAAGAATAAAAACAAAAGAAAGAAGGAAAGATATAA  650

seq1  AGAAGGAAAGAAAGCAAGGGAGAAAGAAAGAGCCCAGAAACAACAATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAAGAAAGCAAGGGAGAAAGAAAGAGCCCAGAAACAACAATATG  700

seq1  TGGGAAAAAACTTGCAAATATCCAGCTGAGTAATTTTGGGGGTAGGAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAAAAACTTGCAAATATCCAGCTGAGTAATTTTGGGGGTAGGAGCT  750

seq1  CATATTGCTGAGCATGACACCGGCCCAAAACTTAGTTGCTTCTTCAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGCTGAGCATGACACCGGCCCAAAACTTAGTTGCTTCTTCAGTGA  800

seq1  CACTCCCTGGTCTTTTTTCTTTTATTCTTTTTATTTTTTTAAACAAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTGGTCTTTTTTCTTTTATTCTTTTTATTTTTTTAAACAAAATT  850

seq1  TATTGGTCATTTTATTTATTTACATGTCTAATGTTATCATCCTTCCTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTCATTTTATTTATTTACATGTCTAATGTTATCATCCTTCCTAGT  900

seq1  TTTACATCCACAAATGCCCTATCCCACCCCCATCCCCGCAAGAAGATTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATCCACAAATGCCCTATCCCACCCCCATCCCCGCAAGAAGATTCT  950

seq1  CTCCCACCCACCCATCTACTACCGCCTTACCACCCTAGCATTGCCCTAGG  1000
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  CTCCCACCCACCCATCTACTAC--GCTTACCACCCTAGCATTGCCCTAGG  998

seq1  CTAGAGCATAAAGCCTTCACAGGAATGACGACCTCTACACTGATTGATGT  1050
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  CTAGAGCATAAAGCCTTCACAGG-ATGACGACCTCTACACTGATGGATGT  1047

seq1  CA-GATAGGTCCATACCCTG-CTATGTCTG-CAGC-TGGAGCCATGGGTC  1096
      || |||||   ||||||||| ||||||||| |||| || ||| |||||| 
seq2  CAGGATAG--TCATACCCTGCCTATGTCTGCCAGCTTGAAGCAATGGGTT  1095

seq1  CCTCCATGTGTGTTTTGTGTGTTTGGTGAGAATTTGGTCCATGAGGAGAG  1146
      | || ||||| |||||||||| || |||   |  || ||||||||||   
seq2  CATCAATGTG-GTTTTGTGTGATTTGTG---AACTGTTCCATGAGGA---  1138

seq1  GATCCAAGAAGAC  1159
      ||| | |||||||
seq2  GATTC-AGAAGAC  1150


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