BAC Information

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BAC

Clone NameB6Ng01-296H05
Chromosome10 (Build37)
Map Location 89,497,639 - 89,586,282
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneTmem16d, Gas2l3, Nr1h4, EG627532, Slc17a8, Scyl2, Actr6, E030041M21Rik, E530015N03Rik, LOC100043039
Downstream geneLOC544719, Apaf1, 1200009F10Rik, Slc25a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296H05.bB6Ng01-296H05.g
ACCGA092060GA092061
length1,1911,066
definitionB6Ng01-296H05.b B6Ng01-296H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,585,087 - 89,586,282)(89,497,639 - 89,498,689)
sequence
gaattcactttgtgtctttttagcttcaagatgtcctagaaactgaatta
atcaagacactaagatactattaaaagaactgacatatacttgtgtcact
taaaaacaaggttgtatcgcgagcaacagatcacagggcaacttcatcac
tgctgatatcatgaaaggttcttacacaaacctagatggtattgtctatt
acatgcctaaactcaacggggtaagtggctattgatcctctgctacaaac
ctatacatctgttactgtacaaaataccataggcatgtataacatacggg
caattattaatataggtaaacgtacctaaatgtgtgaaaatataatatga
aagataaaaatggtctgagtgccattcaagggcattaccatgattgcagc
ttgcaggactataggctgccctgggtgattcagtgaatatcattattgta
cattattgtagacttgaaagcactgtgaacttaggttgcatcaaatgtat
ttttaaattccttaataacaaattgacattttcttactgtaactttcata
ctttaaaaaccttttaacactttaatatcttaatattttcatagtaacac
atgtattaacatgctgaacaaccatagaaaaattctttatgtcctaattc
tataattttttgtttaaatatatttattaataattaacatataaacacac
agacaggtttgttaatagtagcattgtcatagatacaggggcaatgtgct
gtactcaattgttacagtgcatgtctatctatcaacagaacagaacagaa
cagaacagaacagaacagaacagaacagaacccagaaatagtcctacacc
aataccaccataggtcctgacaggggaacacaggcaatgttcagaacgtt
gtaagtgtaatgaagaaaccgtaggaatccacacagatgcatgggttttg
cttctcgttgtggttgttgttactattctaatgcctcctagtttctctac
tgcaagctcttcttgcaaacacacaatcttctattgtatatttaagacca
gctagactaacactctgccacccaacaagtgagaatagatagtctctttc
agaaatccttccttttcccactttaactggaggatgctgactactgtgaa
cctcttctagaatataacaaacaaactccccaggttcccta
gaattcttcttgtatcgggatgatcagattccaaggcaaatttaaatcag
ctcagactaccaataatgatgatcctttttcatttagagttcaggttcct
ggcgaaggtaaattctatgaggcctgcctgacatttactgtctcggggcc
cactctgagttacactcgtttcttgttttgttacaatgtcacttctcaag
tgcctgaaagcaagttaggacttgtagactttctaaattttcagaaaatc
tatttactgaacatttttgatttacacacaatggcctgggaaagcatgcc
tgttcgtttctattctcaacattgaaagtgaagataatttaaaggaaccc
aacagtaattgtcatcattagtataaagaaaatagggttcagctaggtat
ttctaagcatcctatctgatgaacttgtttatcaaccactttctagtaaa
actcttcagtatcattccatggatatgctttggaaaaagtaggaaaagtg
tctaacctgctaattatttttaatatgtgttattagtaatgcttttaggc
ctcagttcagtgtgtatcaaataactggctagctagtcttcactggtctt
tcaattacagttctgatatatatgttttgtatcattcatttcttcatttt
gtactgtgatactatagttctgaaatttgcattataaagcatgtatgttt
aaattgcttacagacttatacacttaggcaccacttatactcctcaaatc
cacttattagatagatggacaaagcaggccattttggataaatgatgaac
tagccacatgtattgtaaggtggtgttgtactgagaccctcaccattctt
gttacaggcctatgcttttttttttttcctttaaagaagtatttatttat
tttaatgtgagtacattttttttttcctgtcttcagacacaccagaagag
ggcacgttgaatctcattacagaatggttgtgagccaccacgtggcttgc
ctgggatttggacttcaaggacctttggaagagttagtcagtgctcttta
actgctgagccatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_89585087_89586282
seq2: B6Ng01-296H05.b_46_1236 (reverse)

seq1  TAGGGA--CTGGGGAG-TTGTTTGGTATATTCTAGAAGAGG-TCACAGTT  46
      ||||||  |||||||| ||||||| |||||||||||||||| |||||| |
seq2  TAGGGAACCTGGGGAGTTTGTTTGTTATATTCTAGAAGAGGTTCACAG-T  49

seq1  AGTCAGCATCCCTCAGGTTAAAAGTGGGGAAAAAGAAGGATTTCTGAAAG  96
      |||||||||||  |||  | ||||| ||||||| ||||||||||||||||
seq2  AGTCAGCATCCTCCAG--TTAAAGT-GGGAAAAGGAAGGATTTCTGAAAG  96

seq1  AGACTATCTTATCTCACCTG-TGGGTGGCAGAGTGTTAGGTTCCTAAGCT  145
      |||||||||  |||||| || ||||||||||||||||||  |    ||||
seq2  AGACTATCTATTCTCACTTGTTGGGTGGCAGAGTGTTAGTCT----AGCT  142

seq1  GGGTCTTAAATATACAATAGAAGATTGTGGTGTTTGCAAG-AGAGCCTTG  194
       ||||||||||||||||||||||||||| ||||||||||| |||| ||||
seq2  -GGTCTTAAATATACAATAGAAGATTGT-GTGTTTGCAAGAAGAG-CTTG  189

seq1  CAGTAGAGAAACTAGGAGGCATTAGAATAGTAACAACAACCACAACGAGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGAAACTAGGAGGCATTAGAATAGTAACAACAACCACAACGAGA  239

seq1  AGCAAAACCCATGCATCTGTGTGGATTCCTACGGTTTCTTCATTACACTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACCCATGCATCTGTGTGGATTCCTACGGTTTCTTCATTACACTT  289

seq1  ACAACGTTCTGAACATTGCCTGTGTTCCCCTGTCAGGACCTATGGTGGTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACGTTCTGAACATTGCCTGTGTTCCCCTGTCAGGACCTATGGTGGTA  339

seq1  TTGGTGTAGGACTATTTCTGGGTTCTGTTCTGTTCTGTTCTGTTCTGTTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTAGGACTATTTCTGGGTTCTGTTCTGTTCTGTTCTGTTCTGTTC  389

seq1  TGTTCTGTTCTGTTCTGTTGATAGATAGACATGCACTGTAACAATTGAGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTCTGTTCTGTTGATAGATAGACATGCACTGTAACAATTGAGT  439

seq1  ACAGCACATTGCCCCTGTATCTATGACAATGCTACTATTAACAAACCTGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACATTGCCCCTGTATCTATGACAATGCTACTATTAACAAACCTGT  489

seq1  CTGTGTGTTTATATGTTAATTATTAATAAATATATTTAAACAAAAAATTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTTTATATGTTAATTATTAATAAATATATTTAAACAAAAAATTA  539

seq1  TAGAATTAGGACATAAAGAATTTTTCTATGGTTGTTCAGCATGTTAATAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTAGGACATAAAGAATTTTTCTATGGTTGTTCAGCATGTTAATAC  589

seq1  ATGTGTTACTATGAAAATATTAAGATATTAAAGTGTTAAAAGGTTTTTAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTACTATGAAAATATTAAGATATTAAAGTGTTAAAAGGTTTTTAA  639

seq1  AGTATGAAAGTTACAGTAAGAAAATGTCAATTTGTTATTAAGGAATTTAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAAAGTTACAGTAAGAAAATGTCAATTTGTTATTAAGGAATTTAA  689

seq1  AAATACATTTGATGCAACCTAAGTTCACAGTGCTTTCAAGTCTACAATAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATTTGATGCAACCTAAGTTCACAGTGCTTTCAAGTCTACAATAA  739

seq1  TGTACAATAATGATATTCACTGAATCACCCAGGGCAGCCTATAGTCCTGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAATAATGATATTCACTGAATCACCCAGGGCAGCCTATAGTCCTGC  789

seq1  AAGCTGCAATCATGGTAATGCCCTTGAATGGCACTCAGACCATTTTTATC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCAATCATGGTAATGCCCTTGAATGGCACTCAGACCATTTTTATC  839

seq1  TTTCATATTATATTTTCACACATTTAGGTACGTTTACCTATATTAATAAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTATATTTTCACACATTTAGGTACGTTTACCTATATTAATAAT  889

seq1  TGCCCGTATGTTATACATGCCTATGGTATTTTGTACAGTAACAGATGTAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCGTATGTTATACATGCCTATGGTATTTTGTACAGTAACAGATGTAT  939

seq1  AGGTTTGTAGCAGAGGATCAATAGCCACTTACCCCGTTGAGTTTAGGCAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGTAGCAGAGGATCAATAGCCACTTACCCCGTTGAGTTTAGGCAT  989

seq1  GTAATAGACAATACCATCTAGGTTTGTGTAAGAACCTTTCATGATATCAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGACAATACCATCTAGGTTTGTGTAAGAACCTTTCATGATATCAG  1039

seq1  CAGTGATGAAGTTGCCCTGTGATCTGTTGCTCGCGATACAACCTTGTTTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGAAGTTGCCCTGTGATCTGTTGCTCGCGATACAACCTTGTTTT  1089

seq1  TAAGTGACACAAGTATATGTCAGTTCTTTTAATAGTATCTTAGTGTCTTG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGACACAAGTATATGTCAGTTCTTTTAATAGTATCTTAGTGTCTTG  1139

seq1  ATTAATTCAGTTTCTAGGACATCTTGAAGCTAAAAAGACACAAAGTGAAT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCAGTTTCTAGGACATCTTGAAGCTAAAAAGACACAAAGTGAAT  1189

seq1  TC  1196
      ||
seq2  TC  1191

seq1: chr10_89497639_89498689
seq2: B6Ng01-296H05.g_69_1134

seq1  GAATTCTTCTTGTATCGGGATGATCAGATTCCAAGGCAAATTTAAATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGTATCGGGATGATCAGATTCCAAGGCAAATTTAAATCAG  50

seq1  CTCAGACTACCAATAATGATGATCCTTTTTCATTTAGAGTTCAGGTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTACCAATAATGATGATCCTTTTTCATTTAGAGTTCAGGTTCCT  100

seq1  GGCGAAGGTAAATTCTATGAGGCCTGCCTGACATTTACTGTCTCGGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAAGGTAAATTCTATGAGGCCTGCCTGACATTTACTGTCTCGGGGCC  150

seq1  CACTCTGAGTTACACTCGTTTCTTGTTTTGTTACAATGTCACTTCTCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGAGTTACACTCGTTTCTTGTTTTGTTACAATGTCACTTCTCAAG  200

seq1  TGCCTGAAAGCAAGTTAGGACTTGTAGACTTTCTAAATTTTCAGAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGAAAGCAAGTTAGGACTTGTAGACTTTCTAAATTTTCAGAAAATC  250

seq1  TATTTACTGAACATTTTTGATTTACACACAATGGCCTGGGAAAGCATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTGAACATTTTTGATTTACACACAATGGCCTGGGAAAGCATGCC  300

seq1  TGTTCGTTTCTATTCTCAACATTGAAAGTGAAGATAATTTAAAGGAACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGTTTCTATTCTCAACATTGAAAGTGAAGATAATTTAAAGGAACCC  350

seq1  AACAGTAATTGTCATCATTAGTATAAAGAAAATAGGGTTCAGCTAGGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAATTGTCATCATTAGTATAAAGAAAATAGGGTTCAGCTAGGTAT  400

seq1  TTCTAAGCATCCTATCTGATGAACTTGTTTATCAACCACTTTCTAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGCATCCTATCTGATGAACTTGTTTATCAACCACTTTCTAGTAAA  450

seq1  ACTCTTCAGTATCATTCCATGGATATGCTTTGGAAAAAGTAGGAAAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCAGTATCATTCCATGGATATGCTTTGGAAAAAGTAGGAAAAGTG  500

seq1  TCTAACCTGCTAATTATTTTTAATATGTGTTATTAGTAATGCTTTTAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCTGCTAATTATTTTTAATATGTGTTATTAGTAATGCTTTTAGGC  550

seq1  CTCAGTTCAGTGTGTATCAAATAACTGGCTAGCTAGTCTTCACTGGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTCAGTGTGTATCAAATAACTGGCTAGCTAGTCTTCACTGGTCTT  600

seq1  TCAATTACAGTTCTGATATATATGTTTTGTATCATTCATTTCTTCATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACAGTTCTGATATATATGTTTTGTATCATTCATTTCTTCATTTT  650

seq1  GTACTGTGATACTATAGTTCTGAAATTTGCATTATAAAGCATGTATGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTGATACTATAGTTCTGAAATTTGCATTATAAAGCATGTATGTTT  700

seq1  AAATTGCTTACAGACTTATACACTTAGGCACCACTTATACTCCTCAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTACAGACTTATACACTTAGGCACCACTTATACTCCTCAAATC  750

seq1  CACTTATTAGATAGATGGACAAAGCAGGCCATTTTGGATAAATGATGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATTAGATAGATGGACAAAGCAGGCCATTTTGGATAAATGATGAAC  800

seq1  TAGCCACATGTATTGTAAGGTGGTGTTGTACTGAGACCCTCACCATTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACATGTATTGTAAGGTGGTGTTGTACTGAGACCCTCACCATTCTT  850

seq1  GTTACAGGCCTATGC--TTTTTTTTTTCCTTTAAAGAAGTATTTATTTAT  898
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  GTTACAGGCCTATGCTTTTTTTTTTTTCCTTTAAAGAAGTATTTATTTAT  900

seq1  TTT-ATGTGAGTACATTTTTTTT---CTGTCTTCAGACACACCAGAAGAG  944
      ||| |||||||||||||||||||   ||||||||||||||||||||||||
seq2  TTTAATGTGAGTACATTTTTTTTTTCCTGTCTTCAGACACACCAGAAGAG  950

seq1  GGCACGT--GATCTCATTACAG-ATGGTTGTGAGCCACCACGTGG-TTG-  989
      |||||||   |||||||||||| |||||||||||||||||||||| ||| 
seq2  GGCACGTTGAATCTCATTACAGAATGGTTGTGAGCCACCACGTGGCTTGC  1000

seq1  CTGGGATTTGAACT--CAGGACCTTTGGAAGAG-TAGTCAGTGCTC-TTA  1035
      |||||||||| |||   |||||||||||||||| |||||||||||| |||
seq2  CTGGGATTTGGACTTCAAGGACCTTTGGAAGAGTTAGTCAGTGCTCTTTA  1050

seq1  ACTGCTGAGCCATCTC  1051
      ||||||||||||||||
seq2  ACTGCTGAGCCATCTC  1066