BAC Information

Click to search

BAC

Clone NameB6Ng01-297E06
Chromosome10 (Build37)
Map Location 32,844,278 - 32,844,800
singlet/doubletsinglet
Overlap geneTrdn
Upstream geneTcba1, EG667761
Downstream geneA330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297E06.bB6Ng01-297E06.g
ACCGA092664GA092665
length5171,265
definitionB6Ng01-297E06.b B6Ng01-297E06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aacccattttttaaaattaaaaaaatatttctatacttgaaactttccaa
tagacttcaactagttaactaaattcaatataattaatggattgttatag
tccttttaaatttttaggaagaaccataagtacaataccttgtataactt
caattgtgctgaattaagaatcttactttctagagcttaagtggagaacc
caaaaactggaaaacagattcattcttgtgcttctaagcatttccaaaca
ctatgaatattgccttctgatgtctaaatattagatgttttctccatatt
tccatatatgtaattcctggttcctattggagatcttattgttcagagac
tgttgttttttataggctaataccttgagttcctataatcatctggtcct
atggagtcacatacaagcagtgttctcagaaaggcaacatggaactaaga
acacaaaaaaatcattgtggtgttagacaacgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgt

gaattcactgatagatttccatgtattgaaccattcccgcatgccaggga
taaagcctactagatcatggtaaatgaacattttgatgagttcttggaat
aggattgcaagaattttatttagtatttttgcattgatatttataaggga
aattggtgtgatgttctttctttgttggttctttgtgtggttttagtatt
agcataactgtagattcatagaacaaattggatagagatccttctgtttc
cattttgtggaatagtttgcattaatagatatatttccctaaccatatgg
ttattactaaaaacttcagagtcactaagtaatggtttggcatttggaaa
taatggggaaatttgtttgggagactatgattgaatttttctatttcttt
gggggatatgggactgtttagatttttaatgtaaccctgatttgactttg
gtacctggtatctgtctagaaaattatcaatttcatccaggttttccagt
ttttgttgagattttatagtaggatctgatgattttttagatttcctcag
aatctgttgttatgtctcccttttcatttctgatttttaaaattagaata
ctgtccctgtgccctctagttagtctggctaagggtttatctatcttgtt
ggttttctcaaagaaccagctcctggtttggttaattctttgcatagttt
ctttttgtttccacttggttggtttcatcctgtatttcattattttctgc
cttctacttctctttggtgaatttgtttctttttgttctagagctttcag
gtatgctgtcaagctgctagtgtatgcttttctccagcttctttttgtga
ggcactaagagcattgagttttcctctcaggactgctttcattgtgtccc
gtaagtttggggtatatttgtgggcttaattttcattaaattctataaag
tctttaattttctatcgttattttcttcccttgacaagttatcattgagt
agagtgttgattcaagctttcacatgtatatgggttttttctattcatct
ttgaccaagggagctaaaaccttctagtggagaaaaggacagcatttttc
caccagtaggtgatggccttaacggggcaggttacatggtaagatgaggt
gaatatcctttacccatctctatctcattgttaccaagcctgattccgag
gtgagtcttgagggacctccctagtcgcatacactgctatgtcaccacgc
agtactacgcctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32844278_32844800
seq2: B6Ng01-297E06.b_44_566

seq1  GAATTCAACCCATTTTTTAAAATTAAAAAAATATTTCTATACTTGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCCATTTTTTAAAATTAAAAAAATATTTCTATACTTGAAACT  50

seq1  TTCCAATAGACTTCAACTAGTTAACTAAATTCAATATAATTAATGGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATAGACTTCAACTAGTTAACTAAATTCAATATAATTAATGGATTG  100

seq1  TTATAGTCCTTTTAAATTTTTAGGAAGAACCATAAGTACAATACCTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGTCCTTTTAAATTTTTAGGAAGAACCATAAGTACAATACCTTGTA  150

seq1  TAACTTCAATTGTGCTGAATTAAGAATCTTACTTTCTAGAGCTTAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCAATTGTGCTGAATTAAGAATCTTACTTTCTAGAGCTTAAGTGG  200

seq1  AGAACCCAAAAACTGGAAAACAGATTCATTCTTGTGCTTCTAAGCATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAAAAACTGGAAAACAGATTCATTCTTGTGCTTCTAAGCATTTC  250

seq1  CAAACACTATGAATATTGCCTTCTGATGTCTAAATATTAGATGTTTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTATGAATATTGCCTTCTGATGTCTAAATATTAGATGTTTTCTC  300

seq1  CATATTTCCATATATGTAATTCCTGGTTCCTATTGGAGATCTTATTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTCCATATATGTAATTCCTGGTTCCTATTGGAGATCTTATTGTTC  350

seq1  AGAGACTGTTGTTTTTTATAGGCTAATACCTTGAGTTCCTATAATCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGTTGTTTTTTATAGGCTAATACCTTGAGTTCCTATAATCATCT  400

seq1  GGTCCTATGGAGTCACATACAAGCAGTGTTCTCAGAAAGGCAACATGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTATGGAGTCACATACAAGCAGTGTTCTCAGAAAGGCAACATGGAA  450

seq1  CTAAGAACACAAAAAAATCATTGTGGTGTTAGACAACGTGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAACACAAAAAAATCATTGTGGTGTTAGACAACGTGTGTGTGTGTG  500

seq1  TGTGTGTGTGTGTGTGTGTGTGT  523
      |||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGT  523


| Home | SequenceCutter | Blast | Download |