BAC Information

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BAC

Clone NameB6Ng01-297F08
Chromosome10 (Build37)
Map Location 24,871,044 - 24,990,654
singlet/doubletdoublet
Overlap geneAkap7, LOC665800
Upstream geneStx7, Moxd1, LOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399
Downstream geneEpb4.1l2, 2010003K15Rik, EG667513, LOC667519, LOC628697, C030003D03Rik, LOC100040851, LOC15352, Samd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297F08.bB6Ng01-297F08.g
ACCGA092714GA092715
length490931
definitionB6Ng01-297F08.b B6Ng01-297F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,871,044 - 24,871,539)(24,989,730 - 24,990,654)
sequence
catgctccgaccagtcagtcattccacagctcttctggactatgagtttt
tcatacttccagacatgcagctttaaatcacaaagagagaactggtcgac
ctcaaaggaaatggaacagaaaattaaaactgaaagcaaaaccatttgta
attctggtatactttaaagaaaacagcaggaagcacagaattgagcccac
tggcaaacttgatccactcaaatagtctgatattagtcctttgaataaag
caagcaggttttcacacagctattatctgggctgagtggcccatcttcct
catcccacaacacatctgctgcttcatggaagcacaccagtgaaaatcac
caacagtagaccaatttgcaaattgctccctagctatctcatctaaaatt
gcaagcagccatcccctacactaggacgtacatgtgcgtgtgggcgtgtg
cgtgtgggcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattccttgctgtctcctgtggcttttgatgtattaagttcaagcttga
attctttggaaaaccaaagcaaggatgaacaaaggattattcctgtttct
gacccatatggctcctgagggaatgaagaaaaggcttgagttggggagag
ggtgagggaaacatagaagagaggaaaagaaaatacattagtaattcacg
gttggccacattatgatgaatgtagttaaggtcttgacgcagtcgaccct
tgtgtgacagccagcagtcttctgatctttatgaccttcaagggcagaga
gaagcagagatatttcttgctttatttcagcttatcaatataccaatcat
aagaagaaacaaatgctttgatgcttctcaaggaagacaaaccaaaggtg
tgccccggagtgagagtagttgggcagaatctcaccctgtgtgatggatt
ggtccatagcaacagttgtcctactttatcaattgtcagggttctctaag
gacagaacaggtcgggtatgagcacacaaattcccgttctctatccatcc
aagtagaaatagctgcctatgtagagattcattcacagaactggctcaca
tggttgtgagtgttggtaagtctgaaatctattgggaagactggaaggct
ggggagccagaagagtttgtgctatgggctcaatccaaaggcagtctggg
aatagaattcctttggccccaagtcttttctccagggtttcagctgattt
catgaaacctgcccacatctggaggagcagagctgtcaacttctaagaga
tggtgtgatgcaaggtgtgtcttcttgtctgggcgtctaactagaaaatg
gatgggcatttttctggagagacagttttttattgtgaatgattttttta
agtaccccttagtctcaactttggtttttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24871044_24871539
seq2: B6Ng01-297F08.b_48_543

seq1  GAATTCCATGCTCCGACCAGTCAGTCATTCCACAGCTCTTCTGGACTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTCCGACCAGTCAGTCATTCCACAGCTCTTCTGGACTATG  50

seq1  AGTTTTTCATACTTCCAGACATGCAGCTTTAAATCACAAAGAGAGAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCATACTTCCAGACATGCAGCTTTAAATCACAAAGAGAGAACTG  100

seq1  GTCGACCTCAAAGGAAATGGAACAGAAAATTAAAACTGAAAGCAAAACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGACCTCAAAGGAAATGGAACAGAAAATTAAAACTGAAAGCAAAACCA  150

seq1  TTTGTAATTCTGGTATACTTTAAAGAAAACAGCAGGAAGCACAGAATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATTCTGGTATACTTTAAAGAAAACAGCAGGAAGCACAGAATTGA  200

seq1  GCCCACTGGCAAACTTGATCCACTCAAATAGTCTGATATTAGTCCTTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTGGCAAACTTGATCCACTCAAATAGTCTGATATTAGTCCTTTGA  250

seq1  ATAAAGCAAGCAGGTTTTCACACAGCTATTATCTGGGCTGAGTGGCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCAAGCAGGTTTTCACACAGCTATTATCTGGGCTGAGTGGCCCAT  300

seq1  CTTCCTCATCCCACAACACATCTGCTGCTTCATGGAAGCACACCAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCATCCCACAACACATCTGCTGCTTCATGGAAGCACACCAGTGAA  350

seq1  AATCACCAACAGTAGACCAATTTGCAAATTGCTCCCTAGCTATCTCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACCAACAGTAGACCAATTTGCAAATTGCTCCCTAGCTATCTCATCT  400

seq1  AAAATTGCAAGCAGCCATCCCCTACACTAGGACGTACATGTGCGTGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGCAAGCAGCCATCCCCTACACTAGGACGTACATGTGCGTGTGGG  450

seq1  CGTGTGCGTGTGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGCGTGTGGGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  496

seq1: chr10_24989730_24990654
seq2: B6Ng01-297F08.g_67_997 (reverse)

seq1  TGAAAAAACAAAGTT-AGACT-AGGGGTACTT-AAAAAATCATTCAC-AT  46
      ||||||| ||||||| ||||| |||||||||| |||||||||||||| ||
seq2  TGAAAAACCAAAGTTGAGACTAAGGGGTACTTAAAAAAATCATTCACAAT  50

seq1  TAAAAACTGTCTCTCCAG-AAAATG-CCATCCATTTTCTAGTTAGACGCC  94
       ||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2  AAAAAACTGTCTCTCCAGAAAAATGCCCATCCATTTTCTAGTTAGACGCC  100

seq1  CAGAC-AGAAGACACACCTTGCATCACACCATCTCTTAGAAGTTGACAGC  143
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAAGAAGACACACCTTGCATCACACCATCTCTTAGAAGTTGACAGC  150

seq1  TCTGCTCCTCCAGATGTGGGCAGGTTTCATGAAATCAGCTGAAACCCTTG  193
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTGCTCCTCCAGATGTGGGCAGGTTTCATGAAATCAGCTGAAACCC-TG  199

seq1  GAGAAAAGACTTGGGGCCAAAGGAATTCTATTCCCAGACTGCCTTTGGAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGACTTGGGGCCAAAGGAATTCTATTCCCAGACTGCCTTTGGAT  249

seq1  TGAGCCCATAGCACAAACTCTTCTGGCTCCCCAGCCTTCCAGTCTTCCCA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCATAGCACAAACTCTTCTGGCTCCCCAGCCTTCCAGTCTTCCCA  299

seq1  ATAGATTTCAGACTTACCAACACTCACAACCATGTGAGCCAGTTCTGTGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTCAGACTTACCAACACTCACAACCATGTGAGCCAGTTCTGTGA  349

seq1  ATGAATCTCTACATAGGCAGCTATTTCTACTTGGATGGATAGAGAACGGG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCTCTACATAGGCAGCTATTTCTACTTGGATGGATAGAGAACGGG  399

seq1  AATTTGTGTGCTCATACCCGACCTGTTCTGTCCTTAGAGAACCCTGACAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGTGCTCATACCCGACCTGTTCTGTCCTTAGAGAACCCTGACAA  449

seq1  TTGATAAAGTAGGACAACTGTTGCTATGGACCAATCCATCACACAGGGTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAAGTAGGACAACTGTTGCTATGGACCAATCCATCACACAGGGTG  499

seq1  AGATTCTGCCCAACTACTCTCACTCCGGGGCACACCTTTGGTTTGTCTTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGCCCAACTACTCTCACTCCGGGGCACACCTTTGGTTTGTCTTC  549

seq1  CTTGAGAAGCATCAAAGCATTTGTTTCTTCTTATGATTGGTATATTGATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAAGCATCAAAGCATTTGTTTCTTCTTATGATTGGTATATTGATA  599

seq1  AGCTGAAATAAAGCAAGAAATATCTCTGCTTCTCTCTGCCCTTGAAGGTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAATAAAGCAAGAAATATCTCTGCTTCTCTCTGCCCTTGAAGGTC  649

seq1  ATAAAGATCAGAAGACTGCTGGCTGTCACACAAGGGTCGACTGCGTCAAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATCAGAAGACTGCTGGCTGTCACACAAGGGTCGACTGCGTCAAG  699

seq1  ACCTTAACTACATTCATCATAATGTGGCCAACCGTGAATTACTAATGTAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAACTACATTCATCATAATGTGGCCAACCGTGAATTACTAATGTAT  749

seq1  TTTCTTTTCCTCTCTTCTATGTTTCCCTCACCCTCTCCCCAACTCAAGCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCCTCTCTTCTATGTTTCCCTCACCCTCTCCCCAACTCAAGCC  799

seq1  TTTTCTTCATTCCCTCAGGAGCCATATGGGTCAGAAACAGGAATAATCCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCATTCCCTCAGGAGCCATATGGGTCAGAAACAGGAATAATCCT  849

seq1  TTGTTCATCCTTGCTTTGGTTTTCCAAAGAATTCAAGCTTGAACTTAATA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCATCCTTGCTTTGGTTTTCCAAAGAATTCAAGCTTGAACTTAATA  899

seq1  CATCAAAAGCCACAGGAGACAGCAAGGAATTC  925
      ||||||||||||||||||||||||||||||||
seq2  CATCAAAAGCCACAGGAGACAGCAAGGAATTC  931