BAC Information

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BAC

Clone NameB6Ng01-297H17
Chromosome10 (Build37)
Map Location 127,982,721 - 128,129,360
singlet/doubletdoublet
Overlap geneZc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b
Upstream geneLrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2
Downstream geneCdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297H17.bB6Ng01-297H17.g
ACCGA092828GA092829
length1,107161
definitionB6Ng01-297H17.b B6Ng01-297H17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,128,255 - 128,129,360)(127,982,721 - 127,982,881)
sequence
gaattctaggactgccagggctattacgcagaaaagccctgtctcagaaa
acaaacaaacaaacaaaaatctgcttaacatcacctaaaacctcaaagag
gtttgttttttaaggcactaggagttgcctcagtgttacagagacactgt
gattaggccatgggagacataataacgggtggcaggaagagcagttggcc
catgtgaattacaacagtactgtgtgggtggggtcactccatcggaagag
aactgttctaaaacctgtcaagaactccctaaactgaactgaggtctatc
cagggaggagtaggttggggaagatttcaggaatacttaatgaactacta
ctacttctctgaaggtttataattacacgtttttaaaaatcccacttttt
gagaaggtttagcagagtaaatggatataactcagtgtggtaaatacatg
ataggaatatgttgctggttggggagatagctctacaggtaacgaaaggt
attgaaagcttgatgagtgttcgagtcccagagcccacattatggaagga
gaaagccaactcccagcggctgtcctctgactgccacaaatgtactgtgg
cagtcaagcacacatatgtgcacatatacacagaaagtaaatggttttag
tttttttatgttttgttttgctttgctttgctttgttgacacagggtttg
tctgtgtagccctggctgtcctggaactcactttttagacccatttctct
ggctcttaagtcttggtcataattagctttttggggtagtctagagcaat
gatgaattttactatcataaggagataattatgtagtttcacaagtgaca
tttatactcaaccctataagtttgggattttctaggtagacaaattaggg
aaggtgttctaatctttcccaagtcaataattgggagttagcactgccat
gctgaataagcgataagcatgctttttacccttttggagaaacaggggga
gcaggaaggaggtgaaactctaagccagtgactcactggatatgctgaat
caacagtaaagagctgagctaagtagtagagacctctcagttgcagaatt
tcagtga
agcccggctgacttgccagaagtcccgcccaggcccttatgcacctggtc
ttgtttggagtgattcacacttgcctggctaacacaggagggagagagct
gggatgaagccacttcatcttactaatgatgctcagccaaggagggggag
ggaaggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128128255_128129360
seq2: B6Ng01-297H17.b_47_1153 (reverse)

seq1  TCACTGAAA-TCTTCAACTGAGAG--TTCTACTACTTAGCTCAGCTCTTT  47
      ||||||||| ||| ||||||||||   |||||||||||||||||||||||
seq2  TCACTGAAATTCTGCAACTGAGAGGTCTCTACTACTTAGCTCAGCTCTTT  50

seq1  AACTGTTGATTCAACATTATCCAGTGAGTCACTGGCTTAAGAGTTCCACC  97
       |||||||||||| || ||||||||||||||||||||| |||||| ||||
seq2  -ACTGTTGATTCAGCA-TATCCAGTGAGTCACTGGCTT-AGAGTTTCACC  97

seq1  TCCTCCCTGCTCCCCCTTGTTTCTCCAAAA-GGTAAAAAGCATGCTTATC  146
      |||| ||||||||||| ||||||||||||| |||||||||||||||||||
seq2  TCCTTCCTGCTCCCCC-TGTTTCTCCAAAAGGGTAAAAAGCATGCTTATC  146

seq1  GCTTA-TCAGCATGGCAGTGCTAACTCCCAATTATTGACTTGGGAAAGAT  195
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATTCAGCATGGCAGTGCTAACTCCCAATTATTGACTTGGGAAAGAT  196

seq1  TAGAACACCTTCCCTAATTTGTCTACCTAGAAAATCCCAAACTTATAGGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACCTTCCCTAATTTGTCTACCTAGAAAATCCCAAACTTATAGGG  246

seq1  TTGAGTATAAATGTCACTTGTGAAACTACATAATTATCTCCTTATGATAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATAAATGTCACTTGTGAAACTACATAATTATCTCCTTATGATAG  296

seq1  TAAAATTCATCATTGCTCTAGACTACCCCAAAAAGCTAATTATGACCAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCATCATTGCTCTAGACTACCCCAAAAAGCTAATTATGACCAAG  346

seq1  ACTTAAGAGCCAGAGAAATGGGTCTAAAAAGTGAGTTCCAGGACAGCCAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGAGCCAGAGAAATGGGTCTAAAAAGTGAGTTCCAGGACAGCCAG  396

seq1  GGCTACACAGACAAACCCTGTGTCAACAAAGCAAAGCAAAGCAAAACAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACACAGACAAACCCTGTGTCAACAAAGCAAAGCAAAGCAAAACAAA  446

seq1  ACATAAAAAAACTAAAACCATTTACTTTCTGTGTATATGTGCACATATGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAAAACTAAAACCATTTACTTTCTGTGTATATGTGCACATATGT  496

seq1  GTGCTTGACTGCCACAGTACATTTGTGGCAGTCAGAGGACAGCCGCTGGG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGACTGCCACAGTACATTTGTGGCAGTCAGAGGACAGCCGCTGGG  546

seq1  AGTTGGCTTTCTCCTTCCATAATGTGGGCTCTGGGACTCGAACACTCATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTTTCTCCTTCCATAATGTGGGCTCTGGGACTCGAACACTCATC  596

seq1  AAGCTTTCAATACCTTTCGTTACCTGTAGAGCTATCTCCCCAACCAGCAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTCAATACCTTTCGTTACCTGTAGAGCTATCTCCCCAACCAGCAA  646

seq1  CATATTCCTATCATGTATTTACCACACTGAGTTATATCCATTTACTCTGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCCTATCATGTATTTACCACACTGAGTTATATCCATTTACTCTGC  696

seq1  TAAACCTTCTCAAAAAGTGGGATTTTTAAAAACGTGTAATTATAAACCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTCTCAAAAAGTGGGATTTTTAAAAACGTGTAATTATAAACCTT  746

seq1  CAGAGAAGTAGTAGTAGTTCATTAAGTATTCCTGAAATCTTCCCCAACCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAGTAGTAGTAGTTCATTAAGTATTCCTGAAATCTTCCCCAACCT  796

seq1  ACTCCTCCCTGGATAGACCTCAGTTCAGTTTAGGGAGTTCTTGACAGGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCCCTGGATAGACCTCAGTTCAGTTTAGGGAGTTCTTGACAGGTT  846

seq1  TTAGAACAGTTCTCTTCCGATGGAGTGACCCCACCCACACAGTACTGTTG  895
      |||||||||||||||||||||||||||||||||||||||           
seq2  TTAGAACAGTTCTCTTCCGATGGAGTGACCCCACCCACANNNNNNNNNNN  896

seq1  TAATTCACATGGGCCAACTGCTCTTCCTGCCACCCGTTATTATGTCTCCC  945
             |||||||||||||||||||||||||||||||||||||||||||
seq2  NNNNNNNCATGGGCCAACTGCTCTTCCTGCCACCCGTTATTATGTCTCCC  946

seq1  ATGGCCTAATCACAGTGTCTCTGTAACACTGAGGCAACTCCTAGTGCCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTAATCACAGTGTCTCTGTAACACTGAGGCAACTCCTAGTGCCTT  996

seq1  AAAAAACAAACCTCTTTGAGGTTTTAGGTGATGTTAAGCAGATTTTTGTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAACCTCTTTGAGGTTTTAGGTGATGTTAAGCAGATTTTTGTT  1046

seq1  TGTTTGTTTGTTTTCTGAGACAGGGCTTTTCTGCGTAATAGCCCTGGCAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTTCTGAGACAGGGCTTTTCTGCGTAATAGCCCTGGCAG  1096

seq1  TCCTAGAATTC  1106
      |||||||||||
seq2  TCCTAGAATTC  1107

seq1: chr10_127982721_127982881
seq2: B6Ng01-297H17.g_80_240

seq1  AGCCCGGCTGACTTGCCAGAAGTCCCGCCCAGGCCCTTATGCACCTGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCGGCTGACTTGCCAGAAGTCCCGCCCAGGCCCTTATGCACCTGGTC  50

seq1  TTGTTTGGAGTGATTCACACTTGCCTGGCTAACACAGGAGGGAGAGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGAGTGATTCACACTTGCCTGGCTAACACAGGAGGGAGAGAGCT  100

seq1  GGGATGAAGCCACTTCATCTTACTAATGATGCTCAGCCAAGGAGGGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAAGCCACTTCATCTTACTAATGATGCTCAGCCAAGGAGGGGGAG  150

seq1  GGAAGGGGAGA  161
      |||||||||||
seq2  GGAAGGGGAGA  161