MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-297N13
Chromosome	10 (Build37)
Map Location	49,552,076 - 49,553,226
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100041689, Grik2
Downstream gene	LOC629652, Ascc3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100041689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Grik2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14806 MGI:95815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629652 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629652
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Ascc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77987 MGI:1925237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 65 ESTs, 5 Proteins

name	LOC100041689 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260725 GeneID:100041689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to translation initiation factor eIF2C transcript_id : XM_001476846.1

name	Grik2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754073 GeneID:14806 MGI:95815
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, kainate 2 (beta 2) transcript_id : NM_010349.1

name	Ascc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94387974 GeneID:77987 MGI:1925237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 65 ESTs, 5 Proteins product : activating signal cointegrator 1 complex subunit 3, transcript variant 1 transcript_id : XM_125617.7

name	LOC100041689 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260726 GeneID:100041689
definition	codon_start : 1 product : similar to translation initiation factor eIF2C protein_id : XP_001476896.1

name	Grik2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754074 CCDS:CCDS23830.1 GeneID:14806 MGI:95815
definition	GO_component : GO:0008328 - ionotropic glutamate receptor complex [Evidence IC]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA]; GO:0045202 - synapse [Evidence TAS] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0042802 - identical protein binding [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IMP]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0015277 - kainate selective glutamate receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glutamate receptor, ionotropic, kainate 2 (beta 2) protein_id : NP_034479.1

name	Ascc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932285 GeneID:77987 MGI:1925237
definition	codon_start : 1 product : activating signal cointegrator 1 complex subunit 3 isoform 1 protein_id : XP_125617.5

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 1 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 2 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 3 pseudo : _no_value

name	LOC629652 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629652
definition	number : 4 pseudo : _no_value

clone name	MSMg01-545I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498B15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-123I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-364M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188E15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318B22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-269G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338L01
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-297N13.b	B6Ng01-297N13.g
ACC	GA093106	GA093107
length	1,144	1,198
definition	B6Ng01-297N13.b	B6Ng01-297N13.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcattcctaaaagttgtagaaaaataaataaaattcaaacctttgt atttattagattaatatataatttatcttaaaatctcgattgtggtagta aaaactgtggaaatacattaattctgaaattaatacccaatgagaatatt ttgtcaaaaggacttattcaacagatcaaaaataactaaaatctctcaaa gaacttgttagcaaagcacaggcatggatgcctgatgacctgcatttgat tggaaacctgcatacaaaggtttatgtgatggtacatgtctataatacta acgctcttaaaaggagacgtgagatagtcagaagaatccatgttttcagg cctgtatgtggtgcattggcagaaacaagagagagcacgcctcaaaacaa agtagaaggaaagaagtaacttctgcaaatttttcttttgacctccacaa tatggcatggcatgcatgtttacaccacacacacacacacacacagacac agagagagagagagagagagagagagagagagacagacagacagacagac agacagtcagacagacatagagaatatcttcctttaaactataacgtagc tttgatacaggaacaaagtaattcccagatgcataaatatatatatatat atgggttttataagcacaaaatagtgggtagaaatgtgagatcattttaa taattattttatatgtttatattaatttactttcaactaaattgactgac atgattggtaccagcaagaacttttgctcattaggcacttaatagtccaa agtaaacaatataagaactgatgtttatagtaacttaaagaatgtacctc catcaagcaagcgaaattttataaatcttatccattgtaggatgttcctg aaaatgctcacagttggcagaaaaacaattttccaagagacaagaaggac ttagttgctattggtttcatacttcatagtgtcagaccctaggcagataa ttttagcccatatttaagcacagcacattttgggatataatttcctgacg accaataactcagtctgtattatcacagttaagacatgttacatgaactt tttaattaagtgtatatgcttctcataggaatgtttgttgactc	gaattctcacctgaggaataccgaatggcagagacgcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccggaggaatccgcaatacctctcctgggc atatatccagaagatgtcccaactggtaagaagaacacatgctccattat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatatggtacatatacacaata gagtactactcagctattaaaaagaacgaatttatgaaattcctagccaa atggatggacctgtagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagccccaaacc taggatacccaagatataagatacaatttgctaaacacatgaaactcgag aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa caaaacacccatggaaggagttacagagacaaagttttggagctgagatg aaaggatggaccatgtagagactgccatatccagggatatcaccccataa tcagcatccaaaacgctgacaccattgcatccactagcaagatttttatt ggaaagacccagattgtagctgtctcttagtgagacttattgctggggct agcaaacaacagaagtggatgcttcacagtcagcttaatgggatgggatc gccgggcttcccaatggaagaagcctggagaaaagtaccaaggagctaaa agggatctgtcaaccctatagtttgacaacatttattgaactaacagtac ccgagagctccttgactcttagctgccatatggtctaaaagaatgaccca tgccgcatccttgaaagtagagccccatggaaccgctacctttattatgc cccagatcatgggtatactcgcagggcacatatatgagctgagtgtcg
quality values	Open. Hide. 62 41 47 39 62 37 18 54 62 62 62 62 62 62 62 62 47 62 49 47 62 59 62 62 62 62 62 51 59 62 62 56 51 51 34 32 34 43 59 28 49 51 59 62 62 62 62 62 62 59 62 62 62 59 62 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 56 62 56 62 48 62 62 62 49 62 62 62 54 52 62 44 41 62 62 62 62 62 62 62 62 62 62 62 38 38 62 62 62 58 58 47 58 49 58 58 58 58 58 58 54 58 58 58 58 58 52 47 38 46 52 54 58 58 58 54 49 54 58 58 58 58 58 58 58 58 58 58 58 54 54 52 58 52 52 58 54 58 58 52 58 58 51 58 58 58 54 58 58 58 58 58 49 54 54 58 51 51 58 51 58 58 58 54 49 58 50 58 58 58 58 51 58 50 49 58 50 53 58 58 58 52 40 58 58 50 53 52 51 49 58 51 58 49 47 54 58 50 58 52 52 58 47 58 58 58 58 58 58 58 58 58 58 58 54 58 50 51 52 49 58 58 58 51 58 58 29 37 50 52 58 51 58 50 50 49 58 58 58 50 47 51 51 58 58 58 40 44 50 58 58 44 47 58 45 53 54 52 39 32 51 41 54 58 58 39 36 54 37 39 53 41 39 50 33 54 54 41 52 50 41 51 54 37 51 51 51 53 53 38 28 35 53 52 54 41 45 53 51 54 49 31 23 33 49 47 35 54 27 52 51 51 35 31 44 54 41 42 31 51 46 34 21 42 54 37 40 30 44 40 26 52 31 21 44 40 51 40 32 47 47 46 45 53 45 53 40 35 45 45 12 4 10 29 33 32 52 32 37 33 42 32 32 32 34 32 29 38 51 34 42 45 39 41 16 11 41 45 32 31 31 31 33 31 31 31 28 45 31 32 45 28 51 18 30 31 36 43 37 31 28 28 22 14 22 46 21 22 36 30 32 42 22 24 17 29 24 33 31 11 30 31 31 27 32 32 30 31 28 31 29 32 48 43 25 46 46 30 30 31 31 41 33 31 31 35 37 37 32 31 36 18 31 21 31 25 12 6 12 32 21 31 30 21 26 31 32 31 31 48 46 33 15 31 31 42 31 25 33 19 31 38 32 31 33 20 31 14 36 44 41 41 30 18 13 21 18 41 36 23 16 38 21 27 20 38 22 31 18 17 29 19 25 17 18 17 20 21 17 7 10 11 8 14 32 32 34 32 32 23 21 34 10 33 21 34 32 34 17 25 11 21 32 15 33 32 31 22 28 19 10 10 19 34 10 21 19 15 25 25 21 28 32 31 30 16 9 14 28 38 38 26 17 16 22 30 13 17 27 8 21 28 13 6 14 22 28 9 15 17 13 9 13 19 12 3 20 34 11 16 40 25 16 8 11 9 22 6 9 40 22 7 12 4 9 22 15 12 28 10 19 5 5 30 7 17 10 15 16 10 17 12 13 3 6 4 15 9 12 6 22 9 7 16 12 7 15 21 16 15 9 23 5 6 4 11 10 12 3 5 7 23 4 5 3 7 12 25 30 30 13 20 7 5 5 17 7 3 4 10 13 16 6 6 6 15 5 7 5 10 5 3 4 11 16 15 16 7 9 8 2 3 3 5 8 6 11 12 18 14 6 4	Open. Hide. 62 49 47 44 62 62 62 47 59 62 59 50 44 20 22 38 28 19 24 30 28 56 50 62 62 62 62 62 59 59 56 62 49 59 59 51 62 56 62 62 59 59 54 59 59 59 59 59 59 62 62 62 59 59 62 62 62 62 50 50 32 46 49 50 59 51 51 62 62 59 56 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 59 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 54 56 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 54 56 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 59 50 62 59 59 56 62 62 62 62 62 62 62 62 62 62 59 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 45 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 44 62 62 62 59 59 62 62 51 56 51 45 44 59 62 62 62 62 59 62 59 62 62 62 62 62 44 56 50 44 41 59 51 62 62 62 62 62 62 62 62 62 56 62 62 56 62 47 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 47 49 62 62 62 62 62 62 62 62 62 62 62 47 47 62 56 62 62 62 49 47 62 62 47 47 62 62 62 56 62 56 62 62 56 50 56 56 42 51 51 62 62 62 62 56 62 62 62 56 62 56 56 62 62 56 62 56 62 62 62 43 54 31 56 47 43 62 62 62 54 62 62 56 62 62 62 62 62 62 47 38 62 62 52 62 62 62 52 62 62 62 62 52 52 62 62 54 62 41 62 50 52 52 62 52 28 62 62 62 62 46 54 62 62 62 54 54 52 62 62 42 52 42 62 42 35 58 35 45 40 50 42 54 54 50 46 34 49 52 34 52 52 52 58 54 54 41 18 52 54 42 49 52 32 58 58 54 52 52 46 52 54 52 46 49 58 52 21 54 39 50 52 52 52 27 54 27 54 52 54 54 33 46 54 52 46 31 52 32 27 38 42 39 42 47 42 47 47 47 42 46 52 46 52 47 35 45 52 16 45 51 54 53 54 20 21 37 49 51 37 40 26 39 40 35 28 41 40 16 29 48 21 49 48 34 50 50 21 34 31 50 58 40 32 32 15 50 48 36 37 46 50 13 26 39 58 24 50 50 23 32 7 28 32 19 28 42 30 33 49 35 26 41 32 32 39 37 31 32 50 18 15 9 21 32 32 39 32 39 40 53 25 49 32 42 37 50 24 38 51 51 25 8 11 17 41 29 51 51 50 51 37 49 37 34 30 37 32 29 28 31 29 27 49 31 39 50 7 26 36 16 15 28 28 12 16 16 30 25 14 10 37 37 27 31 6 42 29 40 33 26 26 37 33 24 18 35 19 53 40 51 18 23 19 35 11 17 30 45 11 33 28 33 30 28 18 8 38 10 9 22 31 17 24 33 34 30 24 29 32 26 18 28 9 45 16 22 45 19 37 10 18 8 24 12 7 10 21 33 31 52 47 32 11 27 10 9 18 26 51 31 15 8 9 14 9 6 32 40 6 15 25 9 29 10 25 22 8 6 16 6 7 8 16 16 33 11 15 12 7 21 18 25 22 8 25 18 30 22 20 40 8 22 33 16 6 9 5 9 15 26 17 32 11 31 42 33 20 31 25 32 21 29 13 25 7 32 13 23 15 37 10 9 5 6 30 31 41 32 9 33 29 30 16 14 11 12 25 30 21 27 10 8 25 13 19 23 46 28 7 18 13 27 21 6 10 16 11 25 38 30 31 8 17 7 25 8 6 7 12 11 7 7 6 9 7 14 41 17 11 8 17 25 20 13 9 16 6 7 7 9 5 23 29 29 37 7 9 10 8 10 6 7 14 8 6 16 16 12 13 7 9 8 6 10 7 8 29 20 24 13 15 28 8 16 16 10 5 7 4 4 6 3 26 9 16 7 11 5 12 19 7 27 14 19 8 3 3 3 3 3 3 13 7 5 10 5 3 3 6 9 6 3 10 7 8 12 3 17 28 14 10 15 13 21 7 12 6 19 16 22 6 14 5 4 20 30 23 7 15 5 7 8 6 15 28 14 22 6 4 11 10 5 10 5 8 18 14 4 4 4 7 7 6 6 5 13 3 9 7 12 7 8 25 8 5 11 7 25 4 5 1 11 4 6 6 17 7 8 10 5 1 7

Alignment Information

BAC End 1

BAC End 2

seq1: chr10_49552076_49553226
seq2: B6Ng01-297N13.b_49_1192

seq1  GAATTCATTCCTAAAAGTTGTAGAAAAATAAATAAAATTCAAACCTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCTAAAAGTTGTAGAAAAATAAATAAAATTCAAACCTTTGT  50

seq1  ATTTATTAGATTAATATATAATTTATCTTAAAATCTCGATTGTGGTAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAGATTAATATATAATTTATCTTAAAATCTCGATTGTGGTAGTA  100

seq1  AAAACTGTGGAAATACATTAATTCTGAAATTAATACCCAATGAGAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGTGGAAATACATTAATTCTGAAATTAATACCCAATGAGAATATT  150

seq1  TTGTCAAAAGGACTTATTCAACAGATCAAAAATAACTAAAATCTCTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAAAGGACTTATTCAACAGATCAAAAATAACTAAAATCTCTCAAA  200

seq1  GAACTTGTTAGCAAAGCACAGGCATGGATGCCTGATGACCTGCATTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGTTAGCAAAGCACAGGCATGGATGCCTGATGACCTGCATTTGAT  250

seq1  TGGAAACCTGCATACAAAGGTTTATGTGATGGTACATGTCTATAATACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACCTGCATACAAAGGTTTATGTGATGGTACATGTCTATAATACTA  300

seq1  ACGCTCTTAAAAGGAGACGTGAGATAGTCAGAAGAATCCATGTTTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCTTAAAAGGAGACGTGAGATAGTCAGAAGAATCCATGTTTTCAGG  350

seq1  CCTGTATGTGGTGCATTGGCAGAAACAAGAGAGAGCACGCCTCAAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGTGGTGCATTGGCAGAAACAAGAGAGAGCACGCCTCAAAACAA  400

seq1  AGTAGAAGGAAAGAAGTAACTTCTGCAAATTTTTCTTTTGACCTCCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGGAAAGAAGTAACTTCTGCAAATTTTTCTTTTGACCTCCACAA  450

seq1  TATGGCATGGCATGCATGTTTACACCACACACACACACACACACAGACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCATGGCATGCATGTTTACACCACACACACACACACACACAGACAC  500

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGACAGACAGACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGACAGACAGACAGAC  550

seq1  AGACAGTCAGACAGACATAGAGAATATCTTCCTTTAAACTATAACGTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTCAGACAGACATAGAGAATATCTTCCTTTAAACTATAACGTAGC  600

seq1  TTTGATACAGGAACAAAGTAATTCCCAGATGCATAAATATATATATATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATACAGGAACAAAGTAATTCCCAGATGCATAAATATATATATATAT  650

seq1  ATGGGTTTTATAAGCACAAAATAGTGGGTAGAAATGTGAGATCATTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTTTATAAGCACAAAATAGTGGGTAGAAATGTGAGATCATTTTAA  700

seq1  TAATTATTTTATATGTTTATATTAATTTACTTTCAACTAAATTGACTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTTATATGTTTATATTAATTTACTTTCAACTAAATTGACTGAC  750

seq1  ATGATTGGTACCAGCAAGAACTTTTGCTCATTAGGCACTTAATAGTCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGGTACCAGCAAGAACTTTTGCTCATTAGGCACTTAATAGTCCAA  800

seq1  AGTAAACAATATAAGAACTGATGTTTATAGTAACTTAAAGAATGTACCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAATATAAGAACTGATGTTTATAGTAACTTAAAGAATGTACCTC  850

seq1  CATCAAGCAAGCGAAATTTTATAAATCTTATCCATTGTAGGATGTTCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGCAAGCGAAATTTTATAAATCTTATCCATTGTAGGATGTTCCTG  900

seq1  AAAATGCTCACAGTTGGCAGAAAAACAA-TTTCCAAGAGACAAGAAGGAC  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAAATGCTCACAGTTGGCAGAAAAACAATTTTCCAAGAGACAAGAAGGAC  950

seq1  TTAGTTGCTATTGG-TTCATAC-TCATAGTGTCAGACCCTAGGCAGATAA  997
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  TTAGTTGCTATTGGTTTCATACTTCATAGTGTCAGACCCTAGGCAGATAA  1000

seq1  TTTTAG-CCATATTTAAGCACAGCACAATTTTGGGATATAAATTTCCTGA  1046
      |||||| ||||||||||||||||||| |||||||||||| ||||||||||
seq2  TTTTAGCCCATATTTAAGCACAGCAC-ATTTTGGGATAT-AATTTCCTGA  1048

seq1  CGACCATTAACTCAGTCCTGTATATTCACAGTTTAAGACATGTTTACATT  1096
      |||||| ||||||||| ||||||  |||||| |||||||||| ||||| |
seq2  CGACCAATAACTCAGT-CTGTATTATCACAG-TTAAGACATG-TTACA-T  1094

seq1  GAAACTTTTAATAAAGTGTATATGGCTTCTTCCATAAGGATGGTTTTGTT  1146
      |||  ||||||| |||||||||| ||||||  |||| | |||  ||||||
seq2  GAACTTTTTAATTAAGTGTATAT-GCTTCT--CATAGGAATG--TTTGTT  1139

seq1  GACTC  1151
      |||||
seq2  GACTC  1144

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information