BAC Information

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BAC

Clone NameB6Ng01-298C19
Chromosome10 (Build37)
Map Location 91,440,429 - 91,441,533
singlet/doubletsinglet
Overlap genenone
Upstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1, Gm872, 4930485B16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298C19.bB6Ng01-298C19.g
ACCGA093351GA093352
length1,2371,091
definitionB6Ng01-298C19.b B6Ng01-298C19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgtaccccattttaaattgggttatttggatt
ttgggggtctaacttcttgagttctttatatattttggatattagtcctc
tattggatgcagggttaatgaggatcttttcccaatttgtaggttgctgt
cttgtcctattgacaatgtcctttgtcttacagaagctttgcagtttcat
gagatatcatttgttaatttttaatcttaaatcctgagccattggtgatc
tgttcaggaaattttactctgtacaaatgctttcaatgctatttcccaat
ttctcttctaatagattcagtgtatctggttttatgtgaggtatttggtt
aacttggacttgagcttcatacaaggtgatatttaggaatcaatttgcat
tcttctataagtggacagccagctagaccagtcccttttgttgaaggtga
tttcttttttacacagtatggttttggcttctttgtcaaagttcaagtgt
ccatgggcatatgggcttgtttctggctcttcatttctattctgcttacc
aaattgtctgtctctgtaccaatactatgcaatttttaaaacactattgc
tctgtagtacatcttgaggtcagggatgatgattcccccagacattcttt
tattgttgagaattgtttttgctgtcctggagtttttgtttttctatata
aagttgagaattgctcttttcatgtctgtgaagaattgtgtgggaatttt
ttttgggattgcactgaatctgtagattgcttttggtgagatggccattt
ttactatgttaattctaccgatccatgaccatgggatatctttccatctt
cggaggtctttgacttctttcttcagggagttgaatttcttgtcatacag
atatttcatttgcttggttaaagttaaaccaagatattttatattatttt
gtggcagttgtgaagaagtcattgccctaatttcttttcctcagcccatt
tatcatttgtataaagggagtcctccaaattgattttagttaatttttat
attccagccacctgcctgaagtttgtttatccagcctatggaattttctg
gaaagattttgggtgtgccttatgtatactatccatgtccacctcggcca
atcagtttatcttggacctcctctccttcaattggcactcatggccctct
ggtgcctaagttccctcagcctgaataccccacggac
gaattcacatcccatccttgtatcttctatctttgcttcagcctggagaa
aattcatcctgctgctcagaatagacatgaggactgggaataggggtctg
taggcatgagcacttactgctcttcagaagggcctgagtttggttcctag
aatccacattgtggcttataactgtctgaagccccagttccagtggctgt
gtttggcctttgtgaaaaccaggcactcatgtggtgcacatacatacatg
caggtgagacactcgaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaaagaagaac
aaaaggataaggaaggaagaaaggaataataataataataataataataa
taataataataataataataatacaagccaggtttccagcctccattgca
gctccctagatagacttctttcttggtgattctctactcatttcacaagg
cctgcatgcttagcctggatgtgaggctgaagaaaaagttccaagttctc
catctgatttggacttgtctcaattccccagactgtgctcacacataact
gcttcgcctgtatcacattagcccaacccagaatgggaagcccaggctgt
agctccagagagacccccatttaaattttagcctttaattttatcagctc
tataacctatacttgaatctgtctgtgagcttgtttttgtatgagattaa
gatttgaatcggcagacccacggaaaataggttgccctcttcaaagggag
tggcaccatccagtttactaaataggaaataaacattgtgaataaatgag
agttttctttctgcctgtctgtgttgagttggagacttaggctcctgctt
tcagccccagcttttgtctcagtttcagactggagctaaccatctcctca
catggataaccatgtagtcacaagttatcatacatagatgtataatatat
acttaatatataatatatcttatataaacatatatggggttatgtacacc
attggacatcacaccaccacttgggcatggcaaccacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91440429_91441533
seq2: B6Ng01-298C19.g_66_1156 (reverse)

seq1  GTGTGTG-----CATGCCCAAGTGTGTGTGTGAATGTCCATGTGTGTACA  45
      |||||||     ||||||||||||   ||||| |||||||   |||||||
seq2  GTGTGTGGTTGCCATGCCCAAGTGGTGGTGTG-ATGTCCAATGGTGTACA  49

seq1  TAACCCCATATATGTTTATATAAGAATATATTTATATATTAAGTATATAT  95
      |||||||||||||||||||||||| ||||| |||||||||||||||||| 
seq2  TAACCCCATATATGTTTATATAAG-ATATA-TTATATATTAAGTATATA-  96

seq1  TTATACATCTTAATTGTAATGAATTAAACTTTGTGACTACATGGGTTATC  145
      ||||||||||        ||| || | |  |||||||||||| |||||||
seq2  TTATACATCT--------ATGTATGATAACTTGTGACTACAT-GGTTATC  137

seq1  CATGGTGAGGGAGATGGTTAGCTCCAGTCTGAAACCTGAGACAAAAGCTG  195
      ||| |||| ||||||||||||||||||||||||| |||||||||||||||
seq2  CAT-GTGA-GGAGATGGTTAGCTCCAGTCTGAAA-CTGAGACAAAAGCTG  184

seq1  GGGCTGAAAGCAGGAGCCTAAGTCTCCAACTCAACACAGACAGGCAGAAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAAAGCAGGAGCCTAAGTCTCCAACTCAACACAGACAGGCAGAAA  234

seq1  GAAAACTCTCATTTATTCACAATGTTTATTTCCTATTTAGTAAACTGGAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCTCATTTATTCACAATGTTTATTTCCTATTTAGTAAACTGGAT  284

seq1  GGTGCCACTCCCTTTGAAGAGGGCAACCTATTTTCCGTGGGTCTGCCGAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCACTCCCTTTGAAGAGGGCAACCTATTTTCCGTGGGTCTGCCGAT  334

seq1  TCAAATCTTAATCTCATACAAAAACAAGCTCACAGACAGATTCAAGTATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTTAATCTCATACAAAAACAAGCTCACAGACAGATTCAAGTATA  384

seq1  GGTTATAGAGCTGATAAAATTAAAGGCTAAAATTTAAATGGGGGTCTCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAGAGCTGATAAAATTAAAGGCTAAAATTTAAATGGGGGTCTCTC  434

seq1  TGGAGCTACAGCCTGGGCTTCCCATTCTGGGTTGGGCTAATGTGATACAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTACAGCCTGGGCTTCCCATTCTGGGTTGGGCTAATGTGATACAG  484

seq1  GCGAAGCAGTTATGTGTGAGCACAGTCTGGGGAATTGAGACAAGTCCAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAAGCAGTTATGTGTGAGCACAGTCTGGGGAATTGAGACAAGTCCAAA  534

seq1  TCAGATGGAGAACTTGGAACTTTTTCTTCAGCCTCACATCCAGGCTAAGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGGAGAACTTGGAACTTTTTCTTCAGCCTCACATCCAGGCTAAGC  584

seq1  ATGCAGGCCTTGTGAAATGAGTAGAGAATCACCAAGAAAGAAGTCTATCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGCCTTGTGAAATGAGTAGAGAATCACCAAGAAAGAAGTCTATCT  634

seq1  AGGGAGCTGCAATGGAGGCTGGAAACCTGGCTTGTATTATTATTATTATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCTGCAATGGAGGCTGGAAACCTGGCTTGTATTATTATTATTATT  684

seq1  ATTATTATTATTATTATTATTATTATTATTATTCCTTTCTTCCTTCCTTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTATTATTATTATTATTATTATTCCTTTCTTCCTTCCTTA  734

seq1  TCCTTTTGTTCTTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  795
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  TCCTTTTGTTCTTCT---TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  781

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAGT  831

seq1  GTCTCACCTGCATGTATGTATGTGCACCACATGAGTGCCTGGTTTTCACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACCTGCATGTATGTATGTGCACCACATGAGTGCCTGGTTTTCACA  881

seq1  AAGGCCAAACACAGCCACTGGAACTGGGGCTTCAGACAGTTATAAGCCAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAAACACAGCCACTGGAACTGGGGCTTCAGACAGTTATAAGCCAC  931

seq1  AATGTGGATTCTAGGAACCAAACTCAGGCCCTTCTGAAGAGCAGTAAGTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGATTCTAGGAACCAAACTCAGGCCCTTCTGAAGAGCAGTAAGTG  981

seq1  CTCATGCCTACAGACCCCTATTCCCAGTCCTCATGTCTATTCTGAGCAGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCCTACAGACCCCTATTCCCAGTCCTCATGTCTATTCTGAGCAGC  1031

seq1  AGGATGAATTTTCTCCAGGCTGAAGCAAAGATAGAAGATACAAGGATGGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAATTTTCTCCAGGCTGAAGCAAAGATAGAAGATACAAGGATGGG  1081

seq1  ATGTGAATTC  1105
      ||||||||||
seq2  ATGTGAATTC  1091