BAC Information

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BAC

Clone NameB6Ng01-298L07
Chromosome10 (Build37)
Map Location 125,697,750 - 125,698,705
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994, Lrig3, LOC100043547
Downstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-298L07.bB6Ng01-298L07.g
ACCGA093743GA093744
length1,210970
definitionB6Ng01-298L07.b B6Ng01-298L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatgtcttcatcggcttcaaaggctgctagtggaagactgactt
ccaggcaactggggtgagagtcttaagcccacacccacagtgacacacct
accccagttcacacctataccaacaaggccacacctccaaatggtgccac
tccctggtccaacaaaccaccacatttcactccctggtccccatagactt
gttcaaaaacatgagcctatggggaccatagttaaacatagcataatgtg
aaatgcatttagtccaactttcaaagtcctcatagtctatagcagtctca
acaatgttaaaagtccaaagttcaaggtctcttcttagatccatccaact
aattaactgtaatccccaaagcaaggcaagaaaccagctgggcaaattcc
aaattctgcatctccatggctgatgtcaaagcagtcttcagatcttcact
cctgtttcatctttgttgactgcaacaaactgctttctcctgggctggtt
ccactccctgttagcagctttcctcagcatttagcccatggctctggcat
ctttaacagctttgagtctccaaggcaatttcaacattacagcttcttgt
ttcagtgtctgggattccacttgatcttttggactcctcctaagggctgg
catcacttctccagctctgccctctgtagcactctaagctcaggttgatc
cactccactacagctgctgttcttggtgatcatcccatggtactgacatc
tccaatacactggggtgttcgactccaactgggcttcaccaatagcctct
cataggctctcttcatcgtgccaagcctcaaatcctttgcatgacccctt
tcagtcctgggccatcaacttacagctgaggctataccttctccagtggc
cttccatgacctctcacagtgccaagcctcagctgttcttcatgacccct
tcatgccttcaaaaccagtaccacctgggtgactcttacacattaccaag
tccaactgcaacacgaggtacaacttggctatctctgtaacacaagcttc
ttttgtgctcccagaaaaacacttcccagaatttcactcattgatgctgg
gtctcttcttaaatcatggcttattttagcttcaggcttaaaccagcatc
catgtcagtagtttcgtccattcttacttcttagagagccaagaagacca
cacatatgtg
gaattctctctgactcccggatgtcccaccttctattcaatcctttccta
ttggtttttaacttggtgattgacaggtgattcctccatacaatacccaa
ggtattctctctctacacagatgaagatcaggctcatgtggtcttacgct
cccttcctgaacctgcgagggactgatcgatttggattcggggagggaca
gttgcgtcttcagttgcgtgccctgctggcaagctcatcttgctccgtgg
aaaagcagcaaattcgaggatgtaaaggcagccgtagttaatccctgtca
caaaataaaaggacacgaatatgagaaaggggtgggggtggagtggcgtc
aggagtagaagagaactaagagagggtgagggtaaccagaatgtgctgtg
cgtagtgtgaaactgtcgaaggaacaaaacataatactaggaaacacgag
ctgagacagacataaaatgccaggtacagactgaggggatacgtcactga
aggcaatagacaccagttccgggcaattttgaaagccaggcaaactccgt
ttggcttgaaatatttgaatagcacctgagtcaaggctcttcactctggg
gtcccaaaggctccgcattagactcagcctcttttctgtggcatacagct
tatcggtttgcagctgcgtagtttataaaccctgtctcttaattatagga
tgttagagaaccaacaaccttttcgttttaagtatcccatccatcccaga
aaaatcttggactgtaatataaacaaacttctccagaaccatgtgtgcca
cagggaaagccatccctgtcacccaaaaggctgccccacagaccctcctg
aataatcccttttatcccttttttactcttccttctgagttttccttgag
aatggcccatctaattttaagtttcagtgtcctgatctttttgaaccatg
tcagccgacagtggttcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_125697750_125698705
seq2: B6Ng01-298L07.g_67_1036

seq1  GAATTCTCTCTGACTCCCGGATGTCCCACCTTCTATTCAATCCTTTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGACTCCCGGATGTCCCACCTTCTATTCAATCCTTTCCTA  50

seq1  TTGGTTTTTAACTTGGTGATTGACAGGTGATTCCTCCATACAATACCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTAACTTGGTGATTGACAGGTGATTCCTCCATACAATACCCAA  100

seq1  GGTATTCTCTCTCTACACAGATGAAGATCAGGCTCATGTGGTCTTACGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCTCTCTCTACACAGATGAAGATCAGGCTCATGTGGTCTTACGCT  150

seq1  CCCTTCCTGAACCTGCGAGGGACTGATCGATTTGGATTCGGGGAGGGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTGAACCTGCGAGGGACTGATCGATTTGGATTCGGGGAGGGACA  200

seq1  GTTGCGTCTTCAGTTGCGTGCCCTGCTGGCAAGCTCATCTTGCTCCGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCGTCTTCAGTTGCGTGCCCTGCTGGCAAGCTCATCTTGCTCCGTGG  250

seq1  AAAAGCAGCAAATTCGAGGATGTAAAGGCAGCCGTAGTTAATCCCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGCAAATTCGAGGATGTAAAGGCAGCCGTAGTTAATCCCTGTCA  300

seq1  CAAAATAAAAGGACACGAATATGAGAAAGGGGTGGGGGTGGAGTGGCGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAAAGGACACGAATATGAGAAAGGGGTGGGGGTGGAGTGGCGTC  350

seq1  AGGAGTAGAAGAGAACTAAGAGAGGGTGAGGGTAACCAGAATGTGCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTAGAAGAGAACTAAGAGAGGGTGAGGGTAACCAGAATGTGCTGTG  400

seq1  CGTAGTGTGAAACTGTCGAAGGAACAAAACATAATACTAGGAAACACGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTGTGAAACTGTCGAAGGAACAAAACATAATACTAGGAAACACGAG  450

seq1  CTGAGACAGACATAAAATGCCAGGTACAGACTGAGGGGATACGTCACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACAGACATAAAATGCCAGGTACAGACTGAGGGGATACGTCACTGA  500

seq1  AGGCAATAGACACCAGTTCCGGGCAATTTTGAAAGCCAGGCAAACTCCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATAGACACCAGTTCCGGGCAATTTTGAAAGCCAGGCAAACTCCGT  550

seq1  TTGGCTTGAAATATTTGAATAGCACCTGAGTCAAGGCTCTTCACTCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTGAAATATTTGAATAGCACCTGAGTCAAGGCTCTTCACTCTGGG  600

seq1  GTCCC-AAGGCTCCGCATTAGACTCAGCCTCTTTTCTGTGGCATACAGCT  649
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAAAGGCTCCGCATTAGACTCAGCCTCTTTTCTGTGGCATACAGCT  650

seq1  TATCGGTTTGCAGCTGCGTAGTTTAT-AACCCTGTCTCTTAATTATAGGA  698
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TATCGGTTTGCAGCTGCGTAGTTTATAAACCCTGTCTCTTAATTATAGGA  700

seq1  TGTTAGAGAACCAACAACC-TTTCGTTTTAAGTATCCCATCCATCCCAGA  747
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTTAGAGAACCAACAACCTTTTCGTTTTAAGTATCCCATCCATCCCAGA  750

seq1  AAAATCTTGGACTGTAAATATAAACAAACTTCTCCAGAACCATGTGTGCC  797
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAATCTTGGACTGT-AATATAAACAAACTTCTCCAGAACCATGTGTGCC  799

seq1  ACAGGG-AAGCCAT-CCTGTCACCCAAAAGGCTGCCCCACAGA-CCTCCT  844
      |||||| ||||||| |||||||||||||||||||||||||||| ||||||
seq2  ACAGGGAAAGCCATCCCTGTCACCCAAAAGGCTGCCCCACAGACCCTCCT  849

seq1  GAATAATCC--TTTATCCC-TTTTTACTCTT-CTTCTGAG-TTTCCTTGA  889
      |||||||||  |||||||| ||||||||||| |||||||| |||||||||
seq2  GAATAATCCCTTTTATCCCTTTTTTACTCTTCCTTCTGAGTTTTCCTTGA  899

seq1  GAATTGGCCATCTAA-TTTAAGTTTCAGGTGT-CTGATC-TTTTGAA-CA  935
      |||| | |||||||| ||||||||||| |||| |||||| ||||||| ||
seq2  GAATGGCCCATCTAATTTTAAGTTTCA-GTGTCCTGATCTTTTTGAACCA  948

seq1  TGTCAGCAGACAGTGG-TCCTG  956
      ||||||| |||||||| |||||
seq2  TGTCAGCCGACAGTGGTTCCTG  970