BAC Information

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BAC

Clone NameB6Ng01-299B11
Chromosome10 (Build37)
Map Location 24,127,567 - 24,128,697
singlet/doubletsinglet
Overlap genenone
Upstream geneRps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1
Downstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299B11.bB6Ng01-299B11.g
ACCGA094029GA094030
length1,0181,134
definitionB6Ng01-299B11.b B6Ng01-299B11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgtcctaattttctttgctgatgaacagcaatgtggaagagta
agccaaatgaatcctttcctccacaacttgcttttctgtcatggtgtttt
gtggcagcaatagaaaccctgagacttcctcagaaaattggacatagtac
taccggaggatcccgcaatacctcttctgggcatatatacagaagatgtt
ccaactggtaagaaggacacatgctccactatgttcaaagcagccttatt
tataatagccagaagctggaaagaacccagatgcccctcaacagaggaat
ggatacagaaaatgtggtacatttacacattggagtactactcagctatt
aaaaggaatgaacttatgaaattcctaggcaaatggttggacctggaggg
catcatcctgagtgaggtaacacaatcacaaaagaactcaaatgatatgt
actcactgataaatggatattagcccagaaacttagtatacctgagatat
aagatacaatttgcaaaacacatgaaactgaagaagaatgaagaccaaag
tgtgaacactttgccccgtcttagaattgggaacagaacacccatggaag
gagttacagagacaaagtttggagctgagacaaaatgatggaccatctag
agacatacactagcaagagtttgctgaaaggaccctgatatagctgtctc
ttgtgagactaggcccgggcctagcaaacacataagtggatgctcacagt
cagctattggatggatcacagggcccccaatggaggagctagagaaagta
tccaaggagctaaagagatctgcaaccctgtaggtgcaacaacattatga
actaaccagtaccccagagctcttgactctagctgcatatgtatcaaaag
atgtcttagtcggccatcactggaaagcgaggcccattggacaagcaaac
tttatatgccccagtacaggggaacgcccgggccaaaaagtgggagtggg
tgggggtaggggaagtgg
gaattcatatgaaaggctttcatggaaacaggaatatttaaattaggcct
gaactttggaaagaataatcaaaaattctaggcaggggcttttgcctagg
tacagtgggaggcagtggtaagcaccgtaaaatgaaaactcgtgtataca
ctgtggattccctggaagagcagagtcatgtggagaagtgtgaggttggt
tctctagacatcacagacttttgaagagagaagaaacattgtacggtttt
tgaaagacagctctagttaccattaggatttggagaattgtaggtttggg
gtgctgctcttgctgacatgatcggaaggtaagagttttactggtgaagt
gtgaatccgtgagcaccaggaagaggggatgaaagttagcaggtccgaaa
gccactgtgctgcattgcttaaaatgcttacaccagtgctgtgcactaga
aactctagcatcctagtattttggataccatatcaatgtggtctttaact
agaacactctactaactaaacaccctaagcatatactattttatatacta
tttatatactattttatattcctgagcactggctcaatatgaggatgttt
gtcaccaaacccgaaagagaaaagttggtggtataaacttcttggaatgg
gcttttcttcattcttcctttttctttctgctgcacaataggcaattgtg
attcaggtgtacttgtttattctggcagaaaattccatagaaacaaaagt
gccattataaagtgctagacaaaaaaacaaccccaccctgctctgccacg
tcttgcaccgctataaggggtcacacacagggactgcccatcagtcctcc
tttgtctcctttcagaaaggaatcttgcagattgtaatacttctccatgt
tctaaaacaccatttgtccaggcaagaagtgctgagtttcagggaaaggg
gtgggtggatcataggcgtccctcatgaggccactcagaacatcctttcc
tggagcctctccttagtgtgtctttcccattgctctggtttcccttaacc
tgcctccagccttttgttaataacaacattgttgagaagtgagttatctt
tccttgattctcaaatacctagttttgggcaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24127567_24128697
seq2: B6Ng01-299B11.g_70_1203 (reverse)

seq1  GTTTGCCCAAATACCTAGTTATTTTGAGAATCA--GGAAGATAACTCACC  48
      ||||||||||  | |||| || |||||||||||  | ||||||||||| |
seq2  GTTTGCCCAA--AACTAGGTA-TTTGAGAATCAAGGAAAGATAACTCA-C  46

seq1  CTCTC-ACCATGTTGT--ATAACAAAAGCTGGGAGGCAGGT--AAGGAAA  93
       |||| || |||||||   |||||||||   ||||||||||  | |||||
seq2  TTCTCAACAATGTTGTTATTAACAAAAGGCTGGAGGCAGGTTAAGGGAAA  96

seq1  CCAGAAGCAAATGGGGAAAGACACACTAAGGAGA-GCTCCAGGAAAGGAT  142
      |||| |||||   ||||||||||||||||||||| |||||||||||||||
seq2  CCAG-AGCAA--TGGGAAAGACACACTAAGGAGAGGCTCCAGGAAAGGAT  143

seq1  TGTCTGAGTGGCCTCATGAGGGACGCCTATGATCCA-CCACCCC-TTCCC  190
        |||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  GTTCTGAGTGGCCTCATGAGGGACGCCTATGATCCACCCACCCCTTTCCC  193

seq1  TGAAACTCAGCACTTCTTGCCTGGACAAATGGTGTTTTAGAACATGGAGA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCAGCACTTCTTGCCTGGACAAATGGTGTTTTAGAACATGGAGA  243

seq1  AGTATTACAATCTGCAAGATTCCTTTCTGAAAGGAGACAAAGGAGGACTG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTACAATCTGCAAGATTCCTTTCTGAAAGGAGACAAAGGAGGACTG  293

seq1  ATGGGCAGTCCCTGTGTGTGACCCCTTATAGCGGTGCAAGACGTGGCAGA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGTCCCTGTGTGTGACCCCTTATAGCGGTGCAAGACGTGGCAGA  343

seq1  GCAGGGTGGGGTTGTTTTTTTGTCTAGCACTTTATAATGGCACTTTTGTT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTGGGGTTGTTTTTTTGTCTAGCACTTTATAATGGCACTTTTGTT  393

seq1  TCTATGGAATTTTCTGCCAGAATAAACAAGTACACCTGAATCACAATTGC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGAATTTTCTGCCAGAATAAACAAGTACACCTGAATCACAATTGC  443

seq1  CTATTGTGCAGCAGAAAGAAAAAGGAAGAATGAAGAAAAGCCCATTCCAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTGCAGCAGAAAGAAAAAGGAAGAATGAAGAAAAGCCCATTCCAA  493

seq1  GAAGTTTATACCACCAACTTTTCTCTTTCGGGTTTGGTGACAAACATCCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTATACCACCAACTTTTCTCTTTCGGGTTTGGTGACAAACATCCT  543

seq1  CATATTGAGCCAGTGCTCAGGAATATAAAATAGTATATAAATAGTATATA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGAGCCAGTGCTCAGGAATATAAAATAGTATATAAATAGTATATA  593

seq1  AAATAGTATATGCTTAGGGTGTTTAGTTAGTAGAGTGTTCTAGTTAAAGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTATATGCTTAGGGTGTTTAGTTAGTAGAGTGTTCTAGTTAAAGA  643

seq1  CCACATTGATATGGTATCCAAAATACTAGGATGCTAGAGTTTCTAGTGCA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTGATATGGTATCCAAAATACTAGGATGCTAGAGTTTCTAGTGCA  693

seq1  CAGCACTGGTGTAAGCATTTTAAGCAATGCAGCACAGTGGCTTTCGGACC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGGTGTAAGCATTTTAAGCAATGCAGCACAGTGGCTTTCGGACC  743

seq1  TGCTAACTTTCATCCCCTCTTCCTGGTGCTCACGGATTCACACTTCACCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACTTTCATCCCCTCTTCCTGGTGCTCACGGATTCACACTTCACCA  793

seq1  GTAAAACTCTTACCTTCCGATCATGTCAGCAAGAGCAGCACCCCAAACCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTCTTACCTTCCGATCATGTCAGCAAGAGCAGCACCCCAAACCT  843

seq1  ACAATTCTCCAAATCCTAATGGTAACTAGAGCTGTCTTTCAAAAACCGTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTCCAAATCCTAATGGTAACTAGAGCTGTCTTTCAAAAACCGTA  893

seq1  CAATGTTTCTTCTCTCTTCAAAAGTCTGTGATGTCTAGAGAACCAACCTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTCTTCTCTCTTCAAAAGTCTGTGATGTCTAGAGAACCAACCTC  943

seq1  ACACTTCTCCACATGACTCTGCTCTTCCAGGGAATCCACAGTGTATACAC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCTCCACATGACTCTGCTCTTCCAGGGAATCCACAGTGTATACAC  993

seq1  GAGTTTTCATTTTACGGTGCTTACCACTGCCTCCCACTGTACCTAGGCAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCATTTTACGGTGCTTACCACTGCCTCCCACTGTACCTAGGCAA  1043

seq1  AAGCCCCTGCCTAGAATTTTTGATTATTCTTTCCAAAGTTCAGGCCTAAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCTGCCTAGAATTTTTGATTATTCTTTCCAAAGTTCAGGCCTAAT  1093

seq1  TTAAATATTCCTGTTTCCATGAAAGCCTTTCATATGAATTC  1131
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATTCCTGTTTCCATGAAAGCCTTTCATATGAATTC  1134