BAC Information

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BAC

Clone NameB6Ng01-299B18
Chromosome10 (Build37)
Map Location 41,637,500 - 41,828,041
singlet/doubletdoublet
Overlap geneArmc2, 1700016J18Rik, LOC624784
Upstream geneWasf1, Gpr6, A530089I17Rik, LOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461, 2410017P07Rik, Sesn1
Downstream geneFoxo3a, Lace1, LOC666540, Snx3, Nr2e1, c222389, Ostm1, Sec63, Scml4, EG666569, C230040G06, Sobp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299B18.bB6Ng01-299B18.g
ACCGA094043GA094044
length1,136615
definitionB6Ng01-299B18.b B6Ng01-299B18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,637,500 - 41,638,612)(41,827,430 - 41,828,041)
sequence
gaattcactctatagaccaggcaggctttgaactcagagatctccctgct
cttgcctccggagtgctaggattaagtgcacgctgcaccaggctcagccc
gtcagttattttcattttattattgacattactagtgtttctgggtgttt
gccctggttggtgccccgtgcaccaagcccatgtctggtgtctgtagagg
tgagaggagggcccaggatttcctagaacggaagctagagatggttgtga
gtctctcagagtgctaaggattaggacaaatggcctggaactccagcccc
tccctctgcagcctctgcagtgcctagtgctgggaattgtagcatgcacc
cacgtgcccctgcaaacagtgtcttaacttaaaagggcactaatttgctt
tgtttttagaaaagaaccattcgattgaagtgaatttttctttcaataat
ctcttaagtttcacctattagtttgcatctaaatctccaatcacaatttt
tcaaaataactgaagacaagatggcttcttcatatgggctttagaaaggt
taatcactttaatcacaccaaccaccaccacaacaacaacaataacaaca
aaaaaaatccctaacctatacacagcatcacaacaataaactcacaaaag
caaactgcacacatctatttgtctctgtttggcagcttcctgagaggagt
ttgtggcgggccccaagaaaagctcttcaataatgagtttgtaagaaatg
actttgggagctgaagagatggctcagtgatttaaaatgcacactattct
tgcagagggcctgagttcggttcccagcagctcacaaccacctctaactc
cagctccagggaatccagcatcctcctctggcttttgtgaacacatgcac
atgtggcatacactcacacagacacacacagatacactgaaatatatatt
tgtataacacattatattaatattatttgaataccttggtattccaataa
taattgattatttggaatattgaatagaatagggtagaatagatttaata
catatataattatattcctggtgtggtgtgatgcgtgggtaagtgacacc
tgggagatttagactatatgggcttattattgaaga
gaattccagtttccaggttgatttttgacgacagttaaatgtccagactc
ttgggtcatgcctgggctatgaaaggtcccactgcacggaaaaagataac
aaaaacaaaacccttggttgcatcagaagtgctcttttgaggttaaggga
tgaggtgggggagaggtcatgctgggtcctggtcaatgacctgttgcccc
gcccctgtctggagcccttgagagggttatggcctggatgctttggtcat
aacatgcagattatgccgtctcccaggaatagtgtgagaagaaaatgcaa
acaagataaggaggggtgtgttcaggaaatagtggctcactgccttagta
ggagcttttcaaaaaaacctggagggggggctggtgtcagggaaggcacc
aaggtagagggaggcgtgggccccatggcaggatgcgagggtagatccaa
cattcatcattccccaccctttcccctgccaggcccaacatggctgctgc
acagctcctgtggttcataccctctcttgaatctgtgaccccatactttc
tgatcacgtccctcattcaattggttctgccccagactgggtgtatccct
ctcagcccgatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_41637500_41638612
seq2: B6Ng01-299B18.b_47_1182

seq1  GAATTCACTCTATAGACCAGGCAGGCTTTGAACTCAGAGATCTCCCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTATAGACCAGGCAGGCTTTGAACTCAGAGATCTCCCTGCT  50

seq1  CTTGCCTCCGGAGTGCTAGGATTAAGTGCACGCTGCACCAGGCTCAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCCGGAGTGCTAGGATTAAGTGCACGCTGCACCAGGCTCAGCCC  100

seq1  GTCAGTTATTTTCATTTTATTATTGACATTACTAGTGTTTCTGGGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTATTTTCATTTTATTATTGACATTACTAGTGTTTCTGGGTGTTT  150

seq1  GCCCTGGTTGGTGCCCCGTGCACCAAGCCCATGTCTGGTGTCTGTAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGTTGGTGCCCCGTGCACCAAGCCCATGTCTGGTGTCTGTAGAGG  200

seq1  TGAGAGGAGGGCCCAGGATTTCCTAGAACGGAAGCTAGAGATGGTTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGAGGGCCCAGGATTTCCTAGAACGGAAGCTAGAGATGGTTGTGA  250

seq1  GTCTCTCAGAGTGCTAAGGATTAGGACAAATGGCCTGGAACTCCAGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCAGAGTGCTAAGGATTAGGACAAATGGCCTGGAACTCCAGCCCC  300

seq1  TCCCTCTGCAGCCTCTGCAGTGCCTAGTGCTGGGAATTGTAGCATGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGCAGCCTCTGCAGTGCCTAGTGCTGGGAATTGTAGCATGCACC  350

seq1  CACGTGCCCCTGCAAACAGTGTCTTAACTTAAAAGGGCACTAATTTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGCCCCTGCAAACAGTGTCTTAACTTAAAAGGGCACTAATTTGCTT  400

seq1  TGTTTTTAGAAAAGAACCATTCGATTGAAGTGAATTTTTCTTTCAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAGAAAAGAACCATTCGATTGAAGTGAATTTTTCTTTCAATAAT  450

seq1  CTCTTAAGTTTCACCTATTAGTTTGCATCTAAATCTCCAATCACAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGTTTCACCTATTAGTTTGCATCTAAATCTCCAATCACAATTTT  500

seq1  TCAAAATAACTGAAGACAAGATGGCTTCTTCATATGGGCTTTAGAAAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAACTGAAGACAAGATGGCTTCTTCATATGGGCTTTAGAAAGGT  550

seq1  TAATCACTTTAATCACACCAACCACCACCACAACAACAACAATAACAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACTTTAATCACACCAACCACCACCACAACAACAACAATAACAACA  600

seq1  AAAAAAATCCCTAACCTATACACAGCATCACAACAATAAACTCACAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCCCTAACCTATACACAGCATCACAACAATAAACTCACAAAAG  650

seq1  CAAACTGCACACATCTATTTGTCTCTGTTTGGCAGCTTCCTGAGAGGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGCACACATCTATTTGTCTCTGTTTGGCAGCTTCCTGAGAGGAGT  700

seq1  TTGTGGCGGGCCCCAAGAAAAGCTCTTCAATAATGAGTTTGTAAGAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCGGGCCCCAAGAAAAGCTCTTCAATAATGAGTTTGTAAGAAATG  750

seq1  ACTTTGGGAGCTGAAGAGATGGCTCAGTGATTTAAAATGCACACTATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGAGCTGAAGAGATGGCTCAGTGATTTAAAATGCACACTATTCT  800

seq1  TGCAGAGGGCCTGAGTTCGGTTCCCAGCAGCTCACAACCACCTCTAACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGGCCTGAGTTCGGTTCCCAGCAGCTCACAACCACCTCTAACTC  850

seq1  CAGCTCCAGGGAATCCAGCATCCTCCTCTGGCTTTTGTGAACACATGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAGGGAATCCAGCATCCTCCTCTGGCTTTTGTGAACACATGCAC  900

seq1  ATGTGGCATACACTCACACAGACACACACAGATACACTG-AATATATATT  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATGTGGCATACACTCACACAGACACACACAGATACACTGAAATATATATT  950

seq1  TGTAT-ACACATTATA-TAATAT--ATTGAATACCTTGGTATT-CAATA-  993
      ||||| |||||||||| ||||||   ||||||||||||||||| ||||| 
seq2  TGTATAACACATTATATTAATATTATTTGAATACCTTGGTATTCCAATAA  1000

seq1  -TATTGA-TATT--GGATATTGAATAG-ATA-GGTAG-ATAGA-TTAATA  1035
        ||||| ||||  | ||||||||||| ||| ||||| ||||| ||||||
seq2  TAATTGATTATTTGGAATATTGAATAGAATAGGGTAGAATAGATTTAATA  1050

seq1  CATATAT-ATTATA-TCCT-GTGT-GTGTG-TGTGTGTGTAAGTGACACT  1080
      ||||||| |||||| |||| |||| ||||| || ||| ||||||||||| 
seq2  CATATATAATTATATTCCTGGTGTGGTGTGATGCGTGGGTAAGTGACACC  1100

seq1  AGGGAGTTTTAGACTATAT-GGCT--ATATTGAAGA  1113
       ||||| |||||||||||| ||||   |||||||||
seq2  TGGGAGATTTAGACTATATGGGCTTATTATTGAAGA  1136

seq1: chr10_41827430_41828041
seq2: B6Ng01-299B18.g_68_682 (reverse)

seq1  ACTCATCGGGCTGAGA-GGATACACCCAGTCT-GGGCAGAACCAATTGAA  48
      |||||||||||||||| ||||||||||||||| |||||||||||||||||
seq2  ACTCATCGGGCTGAGAGGGATACACCCAGTCTGGGGCAGAACCAATTGAA  50

seq1  TGA-GGACGTGATCAGAAAGTATGGGGTCACAGCTTCAAGAGAGGGTATG  97
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGAGGGACGTGATCAGAAAGTATGGGGTCACAGATTCAAGAGAGGGTATG  100

seq1  AACCACAGGAGCTGTGCAGCAGCCATGCTGGGCCTGGCAGGGGAAAGGGT  147
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AACCACAGGAGCTGTGCAGCAGCCATGTTGGGCCTGGCAGGGGAAAGGGT  150

seq1  GGGGACTGATGAATGTTGGATCTACCCTCGCATCCTGCCCTGGGGCCCAC  197
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  GGGGAATGATGAATGTTGGATCTACCCTCGCATCCTGCCATGGGGCCCAC  200

seq1  GCCTCCCTCTACCTTGGTGCCTTCCCTGACACCAGCCCCCCCTCCAGGTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCTCTACCTTGGTGCCTTCCCTGACACCAGCCCCCCCTCCAGGTT  250

seq1  TTTTTGAAAAGCTCCTACTAAGGCAGTGAGCCACTATTTCCTGAACACAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAAAGCTCCTACTAAGGCAGTGAGCCACTATTTCCTGAACACAC  300

seq1  CCCTCCTTATCTTGTTTGCATTTTCTTCTCACACTATTCCTGGGAGACGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTTATCTTGTTTGCATTTTCTTCTCACACTATTCCTGGGAGACGG  350

seq1  CATAATCTGCATGTTATGACCAAAGCATCCAGGCCATAACCCTCTCAAGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCTGCATGTTATGACCAAAGCATCCAGGCCATAACCCTCTCAAGG  400

seq1  GCTCCAGACAGGGGCGGGGCAACAGGTCATTGACCAGGACCCAGCATGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGACAGGGGCGGGGCAACAGGTCATTGACCAGGACCCAGCATGAC  450

seq1  CTCTCCCCCACCTCATCCCTTAACCTCAAAAGAGCACTTCTGATGCAACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCACCTCATCCCTTAACCTCAAAAGAGCACTTCTGATGCAACC  500

seq1  AAGGGTTTTGTTTTTGTTATCTTTTTCCGTGCAGTGGGACCTTTCATAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTTTGTTTTTGTTATCTTTTTCCGTGCAGTGGGACCTTTCATAGC  550

seq1  CCAGGCATGACCCAAGAGTCTGGACATTTAACTGTCGTCAAAAATCAACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCATGACCCAAGAGTCTGGACATTTAACTGTCGTCAAAAATCAACC  600

seq1  TGGAAACTGGAATTC  612
      |||||||||||||||
seq2  TGGAAACTGGAATTC  615