BAC Information

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BAC

Clone NameB6Ng01-299K20
Chromosome10 (Build37)
Map Location 90,879,007 - 91,015,284
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-299K20.bB6Ng01-299K20.g
ACCGA094451GA094452
length1,0081,078
definitionB6Ng01-299K20.b B6Ng01-299K20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,014,721 - 91,015,284)(90,879,007 - 90,880,077)
sequence
gaattctaagatggagatggaggtagatacagcggcaagggatatactag
aggtcccagccagctggagctcctcccagggacggcatttgatgctagcg
ataatctctcttagtaccctggcattgagacttagaaaaatcatatatat
ctcaaaaggctgtggctttggtttgcctcagaggtcttagaacctacctt
ggaaccatgattgctctgaccttccttgtttctccacctttcagctaagg
agtggctttcagcaaatttctcttatctacctgcccagctccaccgaaag
agcaagacaattactaagccttcttacttactaagatggcattagccaaa
agaaagggattaagccccctgttatagaagaaacagtggagtctatcaac
agacttctgtcacatactattgtcctctagttctattccataagaaatca
ttataatctattgtctgcctgcagcctagcgagctttgttggagactctg
tattctttggacccattgagcttcctttaaaaatcatttgctgctctcct
tacatgtccaattctcctattctcctattcccctatagaaaaaggagtat
gcattttgctgtactgtgccaagataacaggctatcagactcctgggcac
tcccccatgttgcaattttccctttttcatattaacaaattcatataact
tttctcttattcaatctgcctttgtcagttcattccagtgagcctcaggg
gatagcaggaatatttttctttaagcctataaaggccacatcttcttcac
aggctccagacacctgctcattgtatcctcttgcctctttgatagaaaga
atgtttccagcctcagcacattctcacctctggcatgacttccacaatcc
tttctccagacatcactcctaagagaaacactgagccttctataggaatg
ctaggcaatgtggtcatcaaacatttgctgagcactgactgtgtgcctgc
tgggtaat
gaattcctactttccagttgttcatttcttggtgtagaatacgtgtgcat
gcacagttctaggtatttgtgtgaatatttatgttttttccttttccttg
ctcttaatattaccctgtgtctcccccaggctaattctcacttgagaact
gaactcagagttaccctctgtcttagtgagtgttctatcactgtgaagag
acaccatgaccatgacatctcttataaaggcaaatacttaattggggctg
gctttgagttcagaggttttgtccatttttatcatggcaggaagcatggc
tatattcaaacagatatagtgctggagaggcagttgagggttccatatcc
agatcagcaggcagctggaagagagagcaacactgagcctggcttgtgca
ttttaaacttcaaagccaaccctcagcgacacacttcctccaacaaggcc
acacccactcctagaatgccacacccactccaacaaggccacacctccta
atagtgccatttcactcccaatgggcttatgggaaccattttctttaaaa
ccggcacaccttcttcaagaagctcccctccatatacaatgaggagttgc
tgcctctcttagacctcttataaataaaaaaccttgtgtttattctcagg
ttgtgctttttttggtcttcttttatttttctactatattttacacacct
tgagagtaaacttattcttaagagtttttgacttagagtctacaaaaaca
tttttaactttaaaaggacctcaataaattttgatgcattaacaatgcct
acatacgaaaatgaaactgtccctatatttaaaatagggactgggctccc
attagatgcgtctattgctgtactaaggtgacattttctttagacgttgc
agttaggcaagaatggttttcctaacatgttcatgccgtgatattgccct
ctgtgttgtatacacggtgaagggactttgctggataaaagatcttgaaa
aacgaggatgatacgggcaatatctgagtgtatctgatgtaattcacctt
aactcttccaggaaacaggtgtctctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91014721_91015284
seq2: B6Ng01-299K20.b_50_613 (reverse)

seq1  GAATTGGACATGTAAGGAGAGCAGCAAATGATTTTTAAAGGAAGCTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGACATGTAAGGAGAGCAGCAAATGATTTTTAAAGGAAGCTCAAT  50

seq1  GGGTCCAAAGAATACAGAGTCTCCAACAAAGCTCGCTAGGCTGCAGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCAAAGAATACAGAGTCTCCAACAAAGCTCGCTAGGCTGCAGGCAG  100

seq1  ACAATAGATTATAATGATTTCTTATGGAATAGAACTAGAGGACAATAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGATTATAATGATTTCTTATGGAATAGAACTAGAGGACAATAGTA  150

seq1  TGTGACAGAAGTCTGTTGATAGACTCCACTGTTTCTTCTATAACAGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAGAAGTCTGTTGATAGACTCCACTGTTTCTTCTATAACAGGGGG  200

seq1  CTTAATCCCTTTCTTTTGGCTAATGCCATCTTAGTAAGTAAGAAGGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCCCTTTCTTTTGGCTAATGCCATCTTAGTAAGTAAGAAGGCTTA  250

seq1  GTAATTGTCTTGCTCTTTCGGTGGAGCTGGGCAGGTAGATAAGAGAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTGTCTTGCTCTTTCGGTGGAGCTGGGCAGGTAGATAAGAGAAATT  300

seq1  TGCTGAAAGCCACTCCTTAGCTGAAAGGTGGAGAAACAAGGAAGGTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAAGCCACTCCTTAGCTGAAAGGTGGAGAAACAAGGAAGGTCAGA  350

seq1  GCAATCATGGTTCCAAGGTAGGTTCTAAGACCTCTGAGGCAAACCAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCATGGTTCCAAGGTAGGTTCTAAGACCTCTGAGGCAAACCAAAGC  400

seq1  CACAGCCTTTTGAGATATATATGATTTTTCTAAGTCTCAATGCCAGGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTTTTGAGATATATATGATTTTTCTAAGTCTCAATGCCAGGGTA  450

seq1  CTAAGAGAGATTATCGCTAGCATCAAATGCCGTCCCTGGGAGGAGCTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGAGATTATCGCTAGCATCAAATGCCGTCCCTGGGAGGAGCTCCA  500

seq1  GCTGGCTGGGACCTCTAGTATATCCCTTGCCGCTGTATCTACCTCCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGGGACCTCTAGTATATCCCTTGCCGCTGTATCTACCTCCATCT  550

seq1  CCATCTTAGAATTC  564
      ||||||||||||||
seq2  CCATCTTAGAATTC  564

seq1: chr10_90879007_90880077
seq2: B6Ng01-299K20.g_70_1147

seq1  GAATTCCTACTTTCCAGTTGTTCATTTCTTGGTGTAGAATACGTGTGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTTTCCAGTTGTTCATTTCTTGGTGTAGAATACGTGTGCAT  50

seq1  GCACAGTTCTAGGTATTTGTGTGAATATTTATGTTTTTTCCTTTTCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTTCTAGGTATTTGTGTGAATATTTATGTTTTTTCCTTTTCCTTG  100

seq1  CTCTTAATATTACCCTGTGTCTCCCCCAGGCTAATTCTCACTTGAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAATATTACCCTGTGTCTCCCCCAGGCTAATTCTCACTTGAGAACT  150

seq1  GAACTCAGAGTTACCCTCTGTCTTAGTGAGTGTTCTATCACTGTGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAGTTACCCTCTGTCTTAGTGAGTGTTCTATCACTGTGAAGAG  200

seq1  ACACCATGACCATGACATCTCTTATAAAGGCAAATACTTAATTGGGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATGACCATGACATCTCTTATAAAGGCAAATACTTAATTGGGGCTG  250

seq1  GCTTTGAGTTCAGAGGTTTTGTCCATTTTTATCATGGCAGGAAGCATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAGTTCAGAGGTTTTGTCCATTTTTATCATGGCAGGAAGCATGGC  300

seq1  TATATTCAAACAGATATAGTGCTGGAGAGGCAGTTGAGGGTTCCATATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCAAACAGATATAGTGCTGGAGAGGCAGTTGAGGGTTCCATATCC  350

seq1  AGATCAGCAGGCAGCTGGAAGAGAGAGCAACACTGAGCCTGGCTTGTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGCAGGCAGCTGGAAGAGAGAGCAACACTGAGCCTGGCTTGTGCA  400

seq1  TTTTAAACTTCAAAGCCAACCCTCAGCGACACACTTCCTCCAACAAGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACTTCAAAGCCAACCCTCAGCGACACACTTCCTCCAACAAGGCC  450

seq1  ACACCCACTCCTAGAATGCCACACCCACTCCAACAAGGCCACACCTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCACTCCTAGAATGCCACACCCACTCCAACAAGGCCACACCTCCTA  500

seq1  ATAGTGCCATTTCACTCCCAATGGGCTTATGGGAACCATTTTCTTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGCCATTTCACTCCCAATGGGCTTATGGGAACCATTTTCTTTAAAA  550

seq1  CCGGCACACCTTCTTCAAGAAGCTCCCCTCCATATACAATGAGGAGTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCACACCTTCTTCAAGAAGCTCCCCTCCATATACAATGAGGAGTTGC  600

seq1  TGCCTCTCTTAGACCTCTTATAAATAAAAAACCTTGTGTTTATTCTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCTTAGACCTCTTATAAATAAAAAACCTTGTGTTTATTCTCAGG  650

seq1  TTGTGCTTTTTTTGGTCTTCTTTTATTTTTCTACTATATTTTACACACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTTTTTTGGTCTTCTTTTATTTTTCTACTATATTTTACACACCT  700

seq1  TGAGAGTAAACTTATTCTTAAGAGTTTTTGACTTAGAGTCTACAAAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTAAACTTATTCTTAAGAGTTTTTGACTTAGAGTCTACAAAAACA  750

seq1  TTTTTAACTTTAAAAGGACCTCAATAAATTTTGATGCATTAACAATGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAACTTTAAAAGGACCTCAATAAATTTTGATGCATTAACAATGCCT  800

seq1  ACATACGAAAATGAAACTGTCCCTATA-TTAAAATAGGGACTGGGCTCCC  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACATACGAAAATGAAACTGTCCCTATATTTAAAATAGGGACTGGGCTCCC  850

seq1  ATTAGATGCGTCTATTGCTGTACTAAGGTGACATTTTCTTTAGACGTTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGCGTCTATTGCTGTACTAAGGTGACATTTTCTTTAGACGTTGC  900

seq1  AG-TAGGC-AGAATGGTTTTCCTAACATGTTCATGCCGTGATATTG-CCT  946
      || ||||| ||||||||||||||||||||||||||||||||||||| |||
seq2  AGTTAGGCAAGAATGGTTTTCCTAACATGTTCATGCCGTGATATTGCCCT  950

seq1  CTGTGTTGTATAACACGGTGAAAGGGACTTTGCTGGATAAAAGATC-TGA  995
      ||||||||||| |||||||| ||||||||||||||||||||||||| |||
seq2  CTGTGTTGTAT-ACACGGTG-AAGGGACTTTGCTGGATAAAAGATCTTGA  998

seq1  AAAAGGGAGATGATAC-GGCATTATCTGAGTGGGTCTGATGTAA-TCACT  1043
      |||| |  |||||||| |||| ||||||||||  |||||||||| |||| 
seq2  AAAACGAGGATGATACGGGCAATATCTGAGTGTATCTGATGTAATTCACC  1048

seq1  TAAACTC-TCCA-GAAACAGGTGTCTCTGG  1071
      | ||||| |||| |||||||||||||||||
seq2  TTAACTCTTCCAGGAAACAGGTGTCTCTGG  1078