BAC Information

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BAC

Clone NameB6Ng01-300B05
Chromosome10 (Build37)
Map Location 129,316,702 - 129,317,850
singlet/doubletsinglet
Overlap genenone
Upstream geneGdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792, GA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814
Downstream geneOlfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300B05.bB6Ng01-300B05.g
ACCGA094744GA094745
length1,2081,128
definitionB6Ng01-300B05.b B6Ng01-300B05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcaatctacaggaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaatttgacaacaaaagtagatcaaaggg
atacaaattggaaaagaggaactcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctcttcacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttttcaatagtcacaaataatataaaatatctcggcg
ttactctgactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaacacaattcttc
aatgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaatccatccagtggaagaagacagcattttcaacaattggtactggc
acaactggttgtatcgtgtagaagaatgcgaatcgatccatactatctcc
tgtactaagtcaaatctagtggatcagacttcacataaaaccagagacac
tgaaactatagagagaaagtgggaaagcctcgaagaatatgggcacaggg
aaaaatcctgaacagaacaagcattgctgtgctgtaggatcgagatgcca
atgacctatgaatccaggttctgcaaggcaaggtccccgctctctataga
ccgaatga
gaattctctgatgccttctcagtgaaaagcgattttaaaacaccaatagg
ctttttatatttatcactgaattaaaataagttattaactggaggctgtg
atgtactggggagcaacgttatgaagatggcaagttcaattcagattatt
tacacagttagaccttgtctcaaaagtaaatgctctacttaagaagctga
ggcaggaggattgtcacaactatcagttaaacctagattatataatggct
atcagactatcaaggaccctgatatcatctccaaaatgtttttttttttt
aactagtataatgatataaagtactacattaaaaataatcactttgggga
atagggggtggcccagtggggactaggtaagtggccttgttatgtaagca
tcagaacatgagtttggattctcaaaatcctcatcacaactagatacagt
gtgtctgtaacctagggatgctgatcctggcatctcactcactgatgcac
cagccaagcaaaagcaaagagcttcaggttcaataagaaatcgtgtctca
aaatttaggtcaagtcaccaaggaaagacgtcctgatggcttctatacat
gcctgtatgggtggatgtagccatacacacgcatcattgccctccataca
tactgaaatcaataaaaaaataatttcaagactgttgtagaaacactgta
gcaagtgtgaaataatattgtattctaaaacaattattattttggagata
attacaaattaattccttttgaggaataattattttgaggatctatgttt
gtattcccagtgtgtgagtcattactaaggcaacaacatctgaataccta
gtagaaaaattactcctatttgctttctcaaaagctatagtgttatatat
taatgagttaaatgaaactacacaaattgtgattttgaaatgaatattga
agtaattctagtattatttatttatttatttatttatttactagttagta
taatatgtgcatgtgcacacagtatgcctgtaagccagatgaaactcata
gataattttctttcagagtggagcatttattctacagcttctcatagcct
ttacctttggataattacttaagttcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_129316702_129317850
seq2: B6Ng01-300B05.g_66_1193

seq1  GAATTCTCTGATGCCTTCTCAGTGAAAAGCGATTTTAAAACACCAATAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATGCCTTCTCAGTGAAAAGCGATTTTAAAACACCAATAGG  50

seq1  CTTTTTATATTTATCACTGAATTAAAATAAGTTATTAACTGGAGGCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATATTTATCACTGAATTAAAATAAGTTATTAACTGGAGGCTGTG  100

seq1  ATGTACTGGGGAGCAACGTTATGAAGATGGCAAGTTCAATTCAGATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTGGGGAGCAACGTTATGAAGATGGCAAGTTCAATTCAGATTATT  150

seq1  TACACAGTTAGACCTTGTCTCAAAAGTAAATGCTCTACTTAAGAAGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTTAGACCTTGTCTCAAAAGTAAATGCTCTACTTAAGAAGCTGA  200

seq1  GGCAGGAGGATTGTCACAACTATCAGTTAAACCTAGATTATATAATGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGGATTGTCACAACTATCAGTTAAACCTAGATTATATAATGGCT  250

seq1  ATCAGACTATCAAGGACCCTGATATCATCTCCAAAATGTTTTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGACTATCAAGGACCCTGATATCATCTCCAAAATGTTTTTTTTTTTT  300

seq1  AACTAGTATAATGATATAAAGTACTACATTAAAAATAATCACTTTGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGTATAATGATATAAAGTACTACATTAAAAATAATCACTTTGGGGA  350

seq1  ATAGGGGGTGGCCCAGTGGGGACTAGGTAAGTGGCCTTGTTATGTAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGGTGGCCCAGTGGGGACTAGGTAAGTGGCCTTGTTATGTAAGCA  400

seq1  TCAGAACATGAGTTTGGATTCTCAAAATCCTCATCACAACTAGATACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACATGAGTTTGGATTCTCAAAATCCTCATCACAACTAGATACAGT  450

seq1  GTGTCTGTAACCTAGGGATGCTGATCCTGGCATCTCACTCACTGATGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGTAACCTAGGGATGCTGATCCTGGCATCTCACTCACTGATGCAC  500

seq1  CAGCCAAGCAAAAGCAAAGAGCTTCAGGTTCAATAAGAAATCGTGTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAGCAAAAGCAAAGAGCTTCAGGTTCAATAAGAAATCGTGTCTCA  550

seq1  AAATTTAGGTCAAGTCACCAAGGAAAGACGTCCTGATGGCTTCTATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGGTCAAGTCACCAAGGAAAGACGTCCTGATGGCTTCTATACAT  600

seq1  GCCTGTATGGGTGGATGTAGCCATACACACGCATCATTGCCCTCCATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTATGGGTGGATGTAGCCATACACACGCATCATTGCCCTCCATACA  650

seq1  TACTGAAATCAATAAAAAAATAATTTCAAGACTGTTGTAGAAACACTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAATCAATAAAAAAATAATTTCAAGACTGTTGTAGAAACACTGTA  700

seq1  GCAAGTGTGAAATAATATTGTATTCTAAAACAATTATTATTTTGGAGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTGTGAAATAATATTGTATTCTAAAACAATTATTATTTTGGAGATA  750

seq1  ATTACAAATTAATTCCTTTTGAGGAATAATTATTTTGAGGATCTATGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATTAATTCCTTTTGAGGAATAATTATTTTGAGGATCTATGTTT  800

seq1  GTATTCCCAGTGTGTGAGTCATTACTAAGGCAACAACATCTGAATACCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCCAGTGTGTGAGTCATTACTAAGGCAACAACATCTGAATACCTA  850

seq1  GTAGAAAAATTACTCCTATTTGCTTTCTCAAAAGCTATAGTGTTATATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAATTACTCCTATTTGCTTTCTCAAAAGCTATAGTGTTATATAT  900

seq1  TAATGAGTTAAATGAAACTACACAAATTGTGATTTTGAAATGAATATTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTTAAATGAAACTACACAAATTGTGATTTTGAAATGAATATTGA  950

seq1  AGTAATTCTTAGTATTTATTTATTTATTTATTTATTTATTTAACTAGTTA  1000
      |||||||| ||||| |||||||||||||||||||||||||| ||||||||
seq2  AGTAATTC-TAGTA-TTATTTATTTATTTATTTATTTATTT-ACTAGTTA  997

seq1  GTTAATTAATTATTGTGCATGGGGCACCACAGTATGCCTGTAAGGCCAGA  1050
      ||  | ||     ||||||| | ||| |||||||||||||||| ||||||
seq2  GTATAATA-----TGTGCAT-GTGCA-CACAGTATGCCTGTAA-GCCAGA  1039

seq1  TGAAACTCATAGGAATAAATTTTCTTTCAGAGTGTGAAGCATTTA-TCTA  1099
      ||||||||||||  || ||||||||||||||  ||| |||||||| ||||
seq2  TGAAACTCATAG--AT-AATTTTCTTTCAGA--GTGGAGCATTTATTCTA  1084

seq1  CCAAGCTTTCTCATTAGCCTTTACTTTGGGATAATTACTTTAATGTTCTA  1149
      |  ||| |||||| |||||||||| || ||||||||||||  | ||||||
seq2  C--AGC-TTCTCA-TAGCCTTTACCTTTGGATAATTACTT--AAGTTCTA  1128