BAC Information

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BAC

Clone NameB6Ng01-300I15
Chromosome10 (Build37)
Map Location 122,251,327 - 122,437,695
singlet/doubletdoublet
Overlap genePpm1h, D630033A02Rik, Mon2
Upstream geneSrgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a
Downstream geneUsp15, LOC100042958, AI851790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300I15.bB6Ng01-300I15.g
ACCGA095091GA095092
length1,2151,142
definitionB6Ng01-300I15.b B6Ng01-300I15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,251,327 - 122,252,527)(122,436,553 - 122,437,695)
sequence
gaattcatggcttgctaaaggttaaccgaggggagtgacacttttggaaa
gctaagtcgtgctgctttggccagtctttgcgacatttcttagagctttg
tgacgtctttctcagagcccattaagttattaattggaacaaggccccgg
ttttcctaagtgctcataaaaatatgttttacatttacttctaattttaa
aagcctaataaatacccattttcttaattaagctgtggtgcacagaatag
aaattaccctgcaacccgggaagcttaaattatatttgtgcttctcaaac
ccagtatccaaatacaaagttggggttttatagctaattggttgggtttg
gcactcacatgtggctcataattcataaaggacaatgggaacgggtattt
tattaagctcgcccaatgatcatttatggaatacttacttgtaactatgt
tacttgcccctctttcctgagtgattgatactgacatcatcttagaccat
cacggccgacttcatatgctcatgatgtgtctcaggcattttggtttaaa
aatgttgttattctcaggaaagaactagtaggtaaccatccacctatcct
cgagactgtgggttatcatttaccaacaagcagtcagaaatccaaagact
ccggtaaactaacggtaccatcgatggcgatgcttagagctgagagaaga
ttctggcaattagtcagggccctgattaattatgtgctaattttgtttca
ttgttggaataataactgtcgtgtgtttatcctttaagacttgacagttt
ttagggtggaaaataaatctttcgttgtgtgtgccctaccgtgtaattac
ttgcagaataatgagagaggccctgcaccggtttgattgaggaaacaccc
agggtcgagggctgttttcagggctgcctcccatcagccttgcgcaggct
ccgggttgccttcaggaaatgctgctggcagagtctgtggcttaccagtg
tctgactcggtcggcatcctctgtgtacagcagcggatgacctcatcttg
aggtggcttgttcgcaaaggggaacaaactttcctttcccttgtagctga
gctcactccacccataataggaaaaaaaaaaaaaaggcgggcatctcgcc
agaatatctcggttccaattatatctctccaaggcgtagagtaatctcag
tttgctcgacaccca

gaattcagcctggggaatgtgggagatcctgtctcaaggcttgatgtagt
gccctgtgccacactggatggccaggctccctgtgggatccagatctgta
ccagcaacccatgggatggaacaccggggtgttcttttcacctttgcatc
cttcattacacgcttattggttactgttaaatactgctaattggccgtct
cagaattaatgtctggcttgcttcatgattgtcgtcatagcagtacagta
agagaggagaagcaggcgagcgtcactgcagttctgagagctctttcagc
agcagataaaatacagagcaggggttagaaggagctttcccatttcatct
ttggcagatttctattaaccagaaaacaaaacatcattttgtaggaagtt
ttaaagcatgtgttgtaaaatattgtagtgactctcgcctttaatcccag
ctctcataaggcagagtcaggcagatctctgagtttgaggctaacctggt
ctacaaatcgagttccaggacagcaagataacccaggaaaaaccaaaaca
aaacaaagcaaagcaaaacaaaacaaaagtaactgtagctagtggcaggg
ctgccctgtgaatgcaggttttcaggaattgaattgctccactgataatt
ttggtaagcttaactacaaatcagacttggtgaggcaactacagattggt
agcaaccacggcactgatgtgtggattgttataagcttgatgagtttgcc
ttttataagaatcttaactctctttttatttcattgtagtcaatattttt
ctgaaattatatctatttgtacaaactttgggagaaaaaaattatttgtt
gtatcttaaaaaatcctaatggaaatcatctcttacttatcctttttagg
cagcaagtgacagaaatcatattcgttctaaaagctgtcagcactctcat
cgactcactgaagaagacccagcccgagaatggttaggtgcttgaggact
tggctgtcctcccagacattgcacatcttgtcttctctgttaggttatca
ctgtggttgtacctttgtattgtcactagttaggggaatggtgagaaacg
tagcccatgtgatctgtctcggtcctctccatgaacaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_122251327_122252527
seq2: B6Ng01-300I15.b_44_1258

seq1  GAATTCATGGCTTGCTAAAGGTTAACCGAGGGGAGTGACACTTTTGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGCTTGCTAAAGGTTAACCGAGGGGAGTGACACTTTTGGAAA  50

seq1  GCTAAGTCGTGCTGCTTTGGCCAGTCTTTGCGACATTTCTTAGAGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTCGTGCTGCTTTGGCCAGTCTTTGCGACATTTCTTAGAGCTTTG  100

seq1  TGACGTCTTTCTCAGAGCCCATTAAGTTATTAATTGGAACAAGGCCCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTCTTTCTCAGAGCCCATTAAGTTATTAATTGGAACAAGGCCCCGG  150

seq1  TTTTCCTAAGTGCTCATAAAAATATGTTTTACATTTACTTCTAATTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTAAGTGCTCATAAAAATATGTTTTACATTTACTTCTAATTTTAA  200

seq1  AAGCCTAATAAATACCCATTTTCTTAATTAAGCTGTGGTGCACAGAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAATAAATACCCATTTTCTTAATTAAGCTGTGGTGCACAGAATAG  250

seq1  AAATTACCCTGCAACCCGGGAAGCTTAAATTATATTTGTGCTTCTCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACCCTGCAACCCGGGAAGCTTAAATTATATTTGTGCTTCTCAAAC  300

seq1  CCAGTATCCAAATACAAAGTTGGGGTTTTATAGCTAATTGGTTGGGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATCCAAATACAAAGTTGGGGTTTTATAGCTAATTGGTTGGGTTTG  350

seq1  GCACTCACATGTGGCTCATAATTCATAAAGGACAATGGGAACGGGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCACATGTGGCTCATAATTCATAAAGGACAATGGGAACGGGTATTT  400

seq1  TATTAAGCTCGCCCAATGATCATTTATGGAATACTTACTTGTAACTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGCTCGCCCAATGATCATTTATGGAATACTTACTTGTAACTATGT  450

seq1  TACTTGCCCCTCTTTCCTGAGTGATTGATACTGACATCATCTTAGACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCCCCTCTTTCCTGAGTGATTGATACTGACATCATCTTAGACCAT  500

seq1  CACGGCCGACTTCATATGCTCATGATGTGTCTCAGGCATTTTGGTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGCCGACTTCATATGCTCATGATGTGTCTCAGGCATTTTGGTTTAAA  550

seq1  AATGTTGTTATTCTCAGGAAAGAACTAGTAGGTAACCATCCACCTATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTTATTCTCAGGAAAGAACTAGTAGGTAACCATCCACCTATCCT  600

seq1  CGAGACTGTGGGTTATCATTTACCAACAAGCAGTCAGAAATCCAAAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACTGTGGGTTATCATTTACCAACAAGCAGTCAGAAATCCAAAGACT  650

seq1  CCGGTAAACTAACGGTACCATCGATGGCGATGCTTAGAGCTGAGAGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTAAACTAACGGTACCATCGATGGCGATGCTTAGAGCTGAGAGAAGA  700

seq1  TTCTGGCAATTAGTCAGGGCCCTGATTAATTATGTGCTAATTTTGTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCAATTAGTCAGGGCCCTGATTAATTATGTGCTAATTTTGTTTCA  750

seq1  TTGTTGGAATAATAACTGTCGTGTGTTTATCCTTTAAGACTTGACAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAATAATAACTGTCGTGTGTTTATCCTTTAAGACTTGACAGTTT  800

seq1  TTAGGGTGGAAAATAAATCTTTCGTTGTGTGTGCCCTACCGTGTAATTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTGGAAAATAAATCTTTCGTTGTGTGTGCCCTACCGTGTAATTAC  850

seq1  TTGCAGAATAATGAGAGAGGCCCTGCACCGGTTTGATTGAGGAAACACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAATAATGAGAGAGGCCCTGCACCGGTTTGATTGAGGAAACACCC  900

seq1  AGGGTCGAGGGCTGTTTTCAGGGCTGCCTCCCATCAGGCCTTGCGCAGGC  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGGTCGAGGGCTGTTTTCAGGGCTGCCTCCCATCA-GCCTTGCGCAGGC  949

seq1  TCCGGGTTGCCTTCAGGAAATGCTGCTGGCAGAGTCTGTGGCTTACCAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGGTTGCCTTCAGGAAATGCTGCTGGCAGAGTCTGTGGCTTACCAGT  999

seq1  GTCTGACTCGGTCGGCATCCTCTGTGTACAGCAGCGGATGA-CTCATC-T  1048
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  GTCTGACTCGGTCGGCATCCTCTGTGTACAGCAGCGGATGACCTCATCTT  1049

seq1  GAGGTGGCCTGGTCCGCAGAGGGG-ACAGAC-TTCCCTTCCCTTGTTAGC  1096
      ||||||| || || |||| ||||| ||| || |||| |||||||| ||||
seq2  GAGGTGG-CTTGTTCGCAAAGGGGAACAAACTTTCCTTTCCCTTG-TAGC  1097

seq1  TGAGCTCA--TCAGCCAT-ATAGGAAAAAAAAAAAAAAG--CGGCATCT-  1140
      ||||||||   || |||| ||||||||||||||||||||   ||||||| 
seq2  TGAGCTCACTCCACCCATAATAGGAAAAAAAAAAAAAAGGCGGGCATCTC  1147

seq1  GCAAG-ATA-CTCGGTTCCA---TTATTTCTCCCAGGCAGAG-GTAGTC-  1183
      || || ||| ||||||||||    ||| ||||| ||||  || ||| || 
seq2  GCCAGAATATCTCGGTTCCAATTATATCTCTCCAAGGCGTAGAGTAATCT  1197

seq1  GAGTTGGCTCGACACCCA  1201
       |||| ||||||||||||
seq2  CAGTTTGCTCGACACCCA  1215


seq1: chr10_122436553_122437695
seq2: B6Ng01-300I15.g_67_1208 (reverse)

seq1  GTTTTTG-TCATGGAGAGGACGGGAGAACAAAGAACACAATGGGGCTACG  49
      ||||||| ||||||||||||| |    | | ||| ||||   ||||||||
seq2  GTTTTTGTTCATGGAGAGGACCG----AGACAGATCACA--TGGGCTACG  44

seq1  -TTCTCA-CATTCCCCTACCTTAGTGACAATACAAAGGTACCA-CACAGT  96
       |||||| |||||||||| | |||||||||||||||||||| | ||||||
seq2  TTTCTCACCATTCCCCTAAC-TAGTGACAATACAAAGGTACAACCACAGT  93

seq1  GATAACCCTGACAGAGAGGAC-AGATGTGCAATGTCTGGGAGGACAGCCA  145
      ||||| ||| ||||||| ||| ||||||||||||||||||||||||||||
seq2  GATAA-CCTAACAGAGAAGACAAGATGTGCAATGTCTGGGAGGACAGCCA  142

seq1  AGTCCTCAAGCACCT-ACCATTCTCGGGCTGGGTCTTCTTCAGTGAGTCG  194
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGTCCTCAAGCACCTAACCATTCTCGGGCTGGGTCTTCTTCAGTGAGTCG  192

seq1  ATGAGAGTGCTGACAGCTTTTAGAACGAATATGATTTCTGTCACTTGCTG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGTGCTGACAGCTTTTAGAACGAATATGATTTCTGTCACTTGCTG  242

seq1  CCTAAAAAGGATAAGTAAGAGATGATTTCCATTAGGATTTTTTAAGATAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAAGGATAAGTAAGAGATGATTTCCATTAGGATTTTTTAAGATAC  292

seq1  AACAAATAATTTTTTTCTCCCAAAGTTTGTACAAATAGATATAATTTCAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATAATTTTTTTCTCCCAAAGTTTGTACAAATAGATATAATTTCAG  342

seq1  AAAAATATTGACTACAATGAAATAAAAAGAG-GTTAAGATTCTTATAAAA  393
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAAATATTGACTACAATGAAATAAAAAGAGAGTTAAGATTCTTATAAAA  392

seq1  GGCAAACTCATCAAGCTTATAACAATCCACACATCAGTGCCGTGGTTGCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACTCATCAAGCTTATAACAATCCACACATCAGTGCCGTGGTTGCT  442

seq1  ACCAATCTGTAGTTGCCTCACCAAGTCTGATTTGTAGTTAAGCTTACCAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCTGTAGTTGCCTCACCAAGTCTGATTTGTAGTTAAGCTTACCAA  492

seq1  AATTATCAGTGGAGCAATTCAATTCCTGAAAACCTGCATTCACAGGGCAG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCAGTGGAGCAATTCAATTCCTGAAAACCTGCATTCACAGGGCAG  542

seq1  CCCTGCCACTAGCTACAGTTACTTTTGTTTTGTTTTGCTTTGCTTTGTTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCACTAGCTACAGTTACTTTTGTTTTGTTTTGCTTTGCTTTGTTT  592

seq1  TGTTTTGGTTTTTCCTGGGTTATCTTGCTGTCCTGGAACTCGATTTGTAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGGTTTTTCCTGGGTTATCTTGCTGTCCTGGAACTCGATTTGTAG  642

seq1  ACCAGGTTAGCCTCAAACTCAGAGATCTGCCTGACTCTGCCTTATGAGAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTTAGCCTCAAACTCAGAGATCTGCCTGACTCTGCCTTATGAGAG  692

seq1  CTGGGATTAAAGGCGAGAGTCACTACAATATTTTACAACACATGCTTTAA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGCGAGAGTCACTACAATATTTTACAACACATGCTTTAA  742

seq1  AACTTCCTACAAAATGATGTTTTGTTTTCTGGTTAATAGAAATCTGCCAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTACAAAATGATGTTTTGTTTTCTGGTTAATAGAAATCTGCCAA  792

seq1  AGATGAAATGGGAAAGCTCCTTCTAACCCCTGCTCTGTATTTTATCTGCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAATGGGAAAGCTCCTTCTAACCCCTGCTCTGTATTTTATCTGCT  842

seq1  GCTGAAAGAGCTCTCAGAACTGCAGTGACGCTCGCCTGCTTCTCCTCTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGAGCTCTCAGAACTGCAGTGACGCTCGCCTGCTTCTCCTCTCT  892

seq1  TACTGTACTGCTATGACGACAATCATGAAGCAAGCCAGACATTAATTCTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTACTGCTATGACGACAATCATGAAGCAAGCCAGACATTAATTCTG  942

seq1  AGACGGCCAATTAGCAGTATTTAACAGTAACCAATAAGCGTGTAATGAAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGGCCAATTAGCAGTATTTAACAGTAACCAATAAGCGTGTAATGAAG  992

seq1  GATGCAAAGGTGAAAAGAACACCCCGGTGTTCCATCCCATGGGTTGCTGG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAAGGTGAAAAGAACACCCCGGTGTTCCATCCCATGGGTTGCTGG  1042

seq1  TACAGATCTGGATCCCACAGGGAGCCTGGCCATCCAGTGTGGCACAGGGC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATCTGGATCCCACAGGGAGCCTGGCCATCCAGTGTGGCACAGGGC  1092

seq1  ACTACATCAAGCCTTGAGACAGGATCTCCCACATTCCCCAGGCTGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATCAAGCCTTGAGACAGGATCTCCCACATTCCCCAGGCTGAATTC  1142


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