BAC Information

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BAC

Clone NameB6Ng01-302I02
Chromosome10 (Build37)
Map Location 112,325,143 - 112,326,305
singlet/doubletsinglet
Overlap genenone
Upstream geneKrr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2, LOC100042639
Downstream gene4921506J03Rik, LOC100042655, LOC100042666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302I02.bB6Ng01-302I02.g
ACCGA096535GA096536
length9481,168
definitionB6Ng01-302I02.b B6Ng01-302I02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaagagagaactagaattgggggtcatttcaggagtgaagtc
gaaacttagcccagtggaaacttcaggcatctaacagggtgaccctagag
aaacctcttagcaatggatatagactctgcattgccattctcctgtaccc
agaaaatgtccttgtggaaacactggggacagaaactcaatcacaaaacc
ttctacctacaatttgtcttgccagcaacattgctagcataaaggtggca
caaaaattttgagagtggccaactaaagaccaatccagtttgagacccta
gccactagagggaggccacccctgtcactgcctggagggccagaaaccag
aggtcagatagcccagagacttaggacagaaccaaatataccagacaaaa
agcaaacaaataaatgaggaaatgaaatgataattcctaatgatagtctg
ctctactcacagataggagactagcataaaaatcatctgagaggctccat
ccagcaactaatggaaacagatggaaaaagccacaggcaaacattaagca
gaacccaggaaatcctgtagaaggaggaagaaaggaaggactgtaggagc
caaaggggtcaaggacaacataagaaaacctcagattcaactaaccttgg
ctcatagggcctcacagagactgaaccaacaaccagaatgcctgcatggg
actgacctaggccccctattatggttgtgtatctcagtcttcttgcctaa
aagtgagaggaggagctatctctgatgcttttgcttgcttgggacccttt
tctcctactgggttgcctcatcaaggcttaatataaagggaggtgtctag
acttacagcaacttgatatgtcccatttgattgatatccctgggaggcct
gccttttttctgaaggaaaacagagggggagtggaatagggggagggg

gaattcagtaagcatatgtcggggagatgagtgagatcatttcccagttt
aaacgaacacgaacacacagaacacgaacacacaggaggtgagcaaagca
agagccgataaaaccggacatcatgaattattcaacacaccttagttcac
tagatccacagaaaagcaagagacagttttattagttagtgaagagtttt
attgctgagacaacacctcctgtcttaggcttccttttcagtagatcttt
ttctacaatctctattccctggctgctttgcctcaagctggaattgagaa
gtgaggacaggctgcagttggtccgctggcctttgagtcactgcttcagc
cctcatccctgacagaggacaccaccatttcccaggaaccttccacattc
aaaagactgtggagttattccacaaacactgtcttagttcctaagtttaa
ggtgtgctgcagtcgtagcagttggagtggccatattaaatgtgttaaca
taggaatagatttgcagatacatacaatacagtgcttgcctgcatgaagt
aatgactagtaagaatcacaaaagctgcacggattaggttactgacacaa
gtcaccagtgtggcaggcttgagatcatgacagagttctacctctgacat
ttcacttcaccttcaatgtacatgtgttagctgctgtgaaagaacactgg
ggccaaggcaatttatagaacggtttgtttggggcttacagcttcagagg
gataggcgtctctggccatcatggcggaaagaatagaggcaggcatggtg
ctggagcagaaactgcaaagtcacttccagacccacgaacaggaagcaga
gagcacactgggaatggccccgttattattgaaacctcacagtccactcc
cttaacaagggccatacctccctaagcattcccaacagttcccctaacta
gggaacaaaagtattcaaactcagaagcctatgatgtccacaatttgtag
gtctaaaattagaaagctctgagaacacttgtcttcatcccaaggaacaa
gctttgaaatggaaaatgaagtagctaagaaatgcccttctgcttgtaga
attagcaactttaaatccagccttaataaggcttagctgtacctttgatc
ctgagcattctccagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_112325143_112326305
seq2: B6Ng01-302I02.g_66_1233

seq1  GAATTCAGTAAGCATATGTCGGGGAGATGAGTGAGATCATTTCCCAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAGCATATGTCGGGGAGATGAGTGAGATCATTTCCCAGTTT  50

seq1  AAACGAACACGAACACACAGAACACGAACACACAGGAGGTGAGCAAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAACACGAACACACAGAACACGAACACACAGGAGGTGAGCAAAGCA  100

seq1  AGAGCCGATAAAACCGGACATCATGAATTATTCAACACACCTTAGTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCGATAAAACCGGACATCATGAATTATTCAACACACCTTAGTTCAC  150

seq1  TAGATCCACAGAAAAGCAAGAGACAGTTTTATTAGTTAGTGAAGAGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCCACAGAAAAGCAAGAGACAGTTTTATTAGTTAGTGAAGAGTTTT  200

seq1  ATTGCTGAGACAACACCTCCTGTCTTAGGCTTCCTTTTCAGTAGATCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGAGACAACACCTCCTGTCTTAGGCTTCCTTTTCAGTAGATCTTT  250

seq1  TTCTACAATCTCTATTCCCTGGCTGCTTTGCCTCAAGCTGGAATTGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAATCTCTATTCCCTGGCTGCTTTGCCTCAAGCTGGAATTGAGAA  300

seq1  GTGAGGACAGGCTGCAGTTGGTCCGCTGGCCTTTGAGTCACTGCTTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGACAGGCTGCAGTTGGTCCGCTGGCCTTTGAGTCACTGCTTCAGC  350

seq1  CCTCATCCCTGACAGAGGACACCACCATTTCCCAGGAACCTTCCACATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCCCTGACAGAGGACACCACCATTTCCCAGGAACCTTCCACATTC  400

seq1  AAAAGACTGTGGAGTTATTCCACAAACACTGTCTTAGTTCCTAAGTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACTGTGGAGTTATTCCACAAACACTGTCTTAGTTCCTAAGTTTAA  450

seq1  GGTGTGCTGCAGTCGTAGCAGTTGGAGTGGCCATATTAAATGTGTTAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCTGCAGTCGTAGCAGTTGGAGTGGCCATATTAAATGTGTTAACA  500

seq1  TAGGAATAGATTTGCAGATACATACAATACAGTGCTTGCCTGCATGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATAGATTTGCAGATACATACAATACAGTGCTTGCCTGCATGAAGT  550

seq1  AATGACTAGTAAGAATCACAAAAGCTGCACGGATTAGGTTACTGACACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTAGTAAGAATCACAAAAGCTGCACGGATTAGGTTACTGACACAA  600

seq1  GTCACCAGTGTGGCAGGCTTGAGATCATGACAGAGTTCTACCTCTGACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCAGTGTGGCAGGCTTGAGATCATGACAGAGTTCTACCTCTGACAT  650

seq1  TTCACTTCACCTTCAATGTACATGTGTTAGCTGCTGTGAAAGAACACTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTCACCTTCAATGTACATGTGTTAGCTGCTGTGAAAGAACACTGG  700

seq1  GGCCAAGGCAATTTATAGAACGGTTTGTTTGGGGCTTACAGCTTCAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGGCAATTTATAGAACGGTTTGTTTGGGGCTTACAGCTTCAGAGG  750

seq1  GATAGGCGTCTCTGGCCATCATGGCGGAAAGAATAGAGGCAGGCATGGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGCGTCTCTGGCCATCATGGCGGAAAGAATAGAGGCAGGCATGGTG  800

seq1  CTGGAGCAGAAACTGCAAAGTCACTTCCAGACCCACGAACAGGAAGCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGCAGAAACTGCAAAGTCACTTCCAGACCCACGAACAGGAAGCAGA  850

seq1  GAGCACACTGGGAATGGCCCCGTTA-TATTGAAACCTCACAGTCCACTCC  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAGCACACTGGGAATGGCCCCGTTATTATTGAAACCTCACAGTCCACTCC  900

seq1  CTTAACAA-GGCCATACCT-CCTAAGCATTCCCAAACAGTTCCCCTAACT  947
      |||||||| |||||||||| ||||||||||||| ||||||||||||||||
seq2  CTTAACAAGGGCCATACCTCCCTAAGCATTCCC-AACAGTTCCCCTAACT  949

seq1  AGGGAAC-AAAGTATTCAAACTCAGAAGCCTATGATGT-CACAA-TTGTA  994
      ||||||| |||||||||||||||||||||||||||||| ||||| |||||
seq2  AGGGAACAAAAGTATTCAAACTCAGAAGCCTATGATGTCCACAATTTGTA  999

seq1  GGTCTTAAAAATTAGAAAGCTCTGAG-ACACTGTTCTCAATTCCCAGG-A  1042
      |||||  ||||||||||||||||||| |||||  |||  || || ||| |
seq2  GGTCT--AAAATTAGAAAGCTCTGAGAACACTTGTCTTCATCCCAAGGAA  1047

seq1  CAAGGCTTGAA--TGAAAATGAGTTAGCT-AGAAATG-CCTTCTGCCTTT  1088
      ||||  |||||   ||||||||  ||||| ||||||| ||||||||  ||
seq2  CAAGCTTTGAAATGGAAAATGAAGTAGCTAAGAAATGCCCTTCTGC--TT  1095

seq1  GTAGAATTAGGCAAACTTGAAACCCAAGGCCTTAAATAAAGC-TAGCTGT  1137
      ||||||||||   ||||| ||| |||  ||||| ||||| || |||||||
seq2  GTAGAATTAG--CAACTTTAAATCCA--GCCTT-AATAAGGCTTAGCTGT  1140

seq1  ACCTTGGAT-CTTAGCATT-TCCAGTAT  1163
      ||||| ||| || |||||| ||||||||
seq2  ACCTTTGATCCTGAGCATTCTCCAGTAT  1168


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