BAC Information

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BAC

Clone NameB6Ng01-302I21
Chromosome10 (Build37)
Map Location 99,740,071 - 99,887,034
singlet/doubletdoublet
Overlap geneEG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051
Upstream geneLOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211
Downstream geneTmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302I21.bB6Ng01-302I21.g
ACCGA096573GA096574
length1,0051,161
definitionB6Ng01-302I21.b B6Ng01-302I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,740,071 - 99,740,996)(99,885,884 - 99,887,034)
sequence
gaattctctaataatgaattaaaatatttgcatttttgctacttttaaat
tttcttaatggattataaacatgttccttaaatttagcaaatacttttat
taaggacataattgtgtgctttgtaatttaaaatacagagttggaagtaa
ttctgacttccagaaagaagacattaaaaaaccacatctcccaagattaa
ataaaatgtatccttcagaattcaatctattaatgactctgaagctttct
atttacctggcttatgactacttatttctcggcagagctggtactctgat
ttgaatgaaaagagcttatgatcacttaaattattgtttgatataagaat
gtaataacagttttccttcttgtttatcttgcctgctccttgttccctct
caaattcatggtctcttttactgttacgtatatatgtatgtgtatatgta
tatgtatatgtatacgtatacgtatatgtatatatacgcataaatatata
aatatagcctgttcaatccatttagtattactggtattatatgatttcag
ggctgaccacttagaattagataaccaggtaaggttctcattattgggca
taactatttcgtccagtttcaggagctcttaggtactaggagtttattgt
ctagggatgggcccaatgagatttttcattcaacagtaacatgtctgttg
acattctacttgcttaggtcttgcttaaccaggcatattattcaggtatc
atgactggttcttccttgtagagaaacaacctcataacagatttctggga
ctctggctcttacagttttttcatccctctgctgtaatgttctctaagcc
ttagatgcaatgattgtaggacaaatgtacgaactggagctgggaactcc
ttagtcaattgttttctgcattttgactgggttatcattttctatcatgg
tctccacttgtagcaaagtgaatttcttttgatggtgggtaaagtggttt
ttttt
gaattccttaattttttagttttaaatgggtttgtaattgaaaggcaatc
acaatttgtttcatttattccctccatcccctcccaggtaccttcccacc
gacaaaggcttctgtaactctttactgaaattaacagcgaggcatagtca
gcaaataatttcatgttaaacgattagctgttgaattgggttagtgactg
aaatgtaagtcatacttgaggattgatgaaaggtatatctgttcactgaa
ctttctttcttatcatatctccatttgcatccgatagctggcaacctgag
gaatttctgggtctaccttccaacatcttctcttctctaatgagctctat
tcacctctccctttctgatacatcttgaacatggtgatgtatcacatatt
ctctcagctcacttttattcctttccttctgtaaagtctttaaactccta
agtgtgaacgaatttctaaattgtctcaaattttctaaaagttggctttg
cacagtggataaagaaatataatttagcatcttatttctgaattccaatt
ggatattatcccattaccatagaaaacattcaatttattatcaaatctat
ggggttccttctgactacgcaaggttctctttataatagttttggattta
attcacatttctcactttataggattttagtttccaggaagcaaacattc
ccagaaggttaatttcttcattctttgtttccgctgtctctccaaatgat
gtgacctccacatgttgatacattttcttggacatctgttagtggattta
atatttgagcttttgcatatagcaaagtcttggaactgaatgcatttagt
acttatcaaagcattatttcaaggacatcttaaagcatgttaaaaatatt
ttagcatttggatcttggctaggacactcagagctgacaaaataaacatg
atagttctttttggtgtgagggtttacataattttaaacctaccttatgg
gtattattctctcatatatagggttatttgatattaatactagaaatttc
tggatcagtataaggagttccctcccatggaagaatactccaatttcctt
ttgaataatgtaagctggttatagatctataactaccaggaaatgtgtag
aaaatatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99740071_99740996
seq2: B6Ng01-302I21.b_47_972

seq1  GAATTCTCTAATAATGAATTAAAATATTTGCATTTTTGCTACTTTTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATAATGAATTAAAATATTTGCATTTTTGCTACTTTTAAAT  50

seq1  TTTCTTAATGGATTATAAACATGTTCCTTAAATTTAGCAAATACTTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAATGGATTATAAACATGTTCCTTAAATTTAGCAAATACTTTTAT  100

seq1  TAAGGACATAATTGTGTGCTTTGTAATTTAAAATACAGAGTTGGAAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACATAATTGTGTGCTTTGTAATTTAAAATACAGAGTTGGAAGTAA  150

seq1  TTCTGACTTCCAGAAAGAAGACATTAAAAAACCACATCTCCCAAGATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTTCCAGAAAGAAGACATTAAAAAACCACATCTCCCAAGATTAA  200

seq1  ATAAAATGTATCCTTCAGAATTCAATCTATTAATGACTCTGAAGCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGTATCCTTCAGAATTCAATCTATTAATGACTCTGAAGCTTTCT  250

seq1  ATTTACCTGGCTTATGACTACTTATTTCTCGGCAGAGCTGGTACTCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTGGCTTATGACTACTTATTTCTCGGCAGAGCTGGTACTCTGAT  300

seq1  TTGAATGAAAAGAGCTTATGATCACTTAAATTATTGTTTGATATAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGAAAAGAGCTTATGATCACTTAAATTATTGTTTGATATAAGAAT  350

seq1  GTAATAACAGTTTTCCTTCTTGTTTATCTTGCCTGCTCCTTGTTCCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAACAGTTTTCCTTCTTGTTTATCTTGCCTGCTCCTTGTTCCCTCT  400

seq1  CAAATTCATGGTCTCTTTTACTGTTACGTATATATGTATGTGTATATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCATGGTCTCTTTTACTGTTACGTATATATGTATGTGTATATGTA  450

seq1  TATGTATATGTATACGTATACGTATATGTATATATACGCATAAATATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATGTATACGTATACGTATATGTATATATACGCATAAATATATA  500

seq1  AATATAGCCTGTTCAATCCATTTAGTATTACTGGTATTATATGATTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCCTGTTCAATCCATTTAGTATTACTGGTATTATATGATTTCAG  550

seq1  GGCTGACCACTTAGAATTAGATAACCAGGTAAGGTTCTCATTATTGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGACCACTTAGAATTAGATAACCAGGTAAGGTTCTCATTATTGGGCA  600

seq1  TAACTATTTCGTCCAGTTTCAGGAGCTCTTAGGTACTAGGAGTTTATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATTTCGTCCAGTTTCAGGAGCTCTTAGGTACTAGGAGTTTATTGT  650

seq1  CTAGGGATGGGCCCAATGAGATTTTTCATTCAACAGTAACATGTCTGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGATGGGCCCAATGAGATTTTTCATTCAACAGTAACATGTCTGTTG  700

seq1  ACATTCTACTTGCTTAGGTCTTGCTTAACCAGGCATATTATTCAGGTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTACTTGCTTAGGTCTTGCTTAACCAGGCATATTATTCAGGTATC  750

seq1  ATGACTGGTTCTTCCTTGTAGAGAAACAACCTCATAACAGATTTCTGGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGGTTCTTCCTTGTAGAGAAACAACCTCATAACAGATTTCTGGGA  800

seq1  CTCTGGCTCTTACAGTTTTTTCATCCCTCTGCTGTAATGTTCTCTAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTCTTACAGTTTTTTCATCCCTCTGCTGTAATGTTCTCTAAGCC  850

seq1  TTAGATGCAATGATTGTAGGACAAATGTACGAACTGGAGCTGGGAACTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGCAATGATTGTAGGACAAATGTACGAACTGGAGCTGGGAACTCC  900

seq1  TTAGTCAATTGTTTTCTGCATTTTGA  926
      ||||||||||||||||||||||||||
seq2  TTAGTCAATTGTTTTCTGCATTTTGA  926

seq1: chr10_99885884_99887034
seq2: B6Ng01-302I21.g_65_1225 (reverse)

seq1  TAAAATA-TTTCT--ACATTTCCTGGTAGTTTATAATTTTATATACAAAC  47
      ||||||| |||||  |||||||||||||| |||||  | ||||  ||   
seq2  TAAAATATTTTCTACACATTTCCTGGTAG-TTATAGATCTATAACCAGCT  49

seq1  TACATTTATCAAAA-GAAAT--GAGTA-TCTT-CAT--GAGAGAACTCCT  90
      ||||||  |||||| |||||  ||||| |||| |||  ||| ||||||||
seq2  TACATTATTCAAAAGGAAATTGGAGTATTCTTCCATGGGAGGGAACTCCT  99

seq1  AATACTGAT-CAGAAATTTCTAGTA-TAATATCAAATAACCCTATATATG  138
       |||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  TATACTGATCCAGAAATTTCTAGTATTAATATCAAATAACCCTATATATG  149

seq1  AGAGAATAATA-CCATAAGGTAGTTTTAAAATTATGTAAACCCTCACACC  187
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  AGAGAATAATACCCATAAGGTAGGTTTAAAATTATGTAAACCCTCACACC  199

seq1  AAAAAGAACTATCATGTTTATTTTTGTTCAGCTCTGAGTGTCCTAGCCAA  237
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  AAAAAGAACTATCATGTTTATTTT--GTCAGCTCTGAGTGTCCTAGCCAA  247

seq1  GATCCAAATGCTAAAATATTTTTAACATGCTTTAAGATGTCCTTGAAATA  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAAATGCTAAAATATTTTTAACATGCTTTAAGATGTCCTTGAAATA  297

seq1  ATGCTTTGATAAGTACTAAATGCATTCAGTTCCAAGACTTTGCTATATGC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTGATAAGTACTAAATGCATTCAGTTCCAAGACTTTGCTATATGC  347

seq1  AAAAGCTCAAATATTAAATCCACTAACAGATGTCCAAGAAAATGTATCAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTCAAATATTAAATCCACTAACAGATGTCCAAGAAAATGTATCAA  397

seq1  CATGTGGAGGTCACATCATTTGGAGAGACAGCGGAAACAAAGAATGAAGA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGAGGTCACATCATTTGGAGAGACAGCGGAAACAAAGAATGAAGA  447

seq1  AATTAACCTTCTGGGAATGTTTGCTTCCTGGAAACTAAAATCCTATAAAG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACCTTCTGGGAATGTTTGCTTCCTGGAAACTAAAATCCTATAAAG  497

seq1  TGAGAAATGTGAATTAAATCCAAAACTATTATAAAGAGAACCTTGCGTAG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATGTGAATTAAATCCAAAACTATTATAAAGAGAACCTTGCGTAG  547

seq1  TCAGAAGGAACCCCATAGATTTGATAATAAATTGAATGTTTTCTATGGTA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGAACCCCATAGATTTGATAATAAATTGAATGTTTTCTATGGTA  597

seq1  ATGGGATAATATCCAATTGGAATTCAGAAATAAGATGCTAAATTATATTT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATAATATCCAATTGGAATTCAGAAATAAGATGCTAAATTATATTT  647

seq1  CTTTATCCACTGTGCAAAGCCAACTTTTAGAAAATTTGAGACAATTTAGA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCCACTGTGCAAAGCCAACTTTTAGAAAATTTGAGACAATTTAGA  697

seq1  AATTCGTTCACACTTAGGAGTTTAAAGACTTTACAGAAGGAAAGGAATAA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGTTCACACTTAGGAGTTTAAAGACTTTACAGAAGGAAAGGAATAA  747

seq1  AAGTGAGCTGAGAGAATATGTGATACATCACCATGTTCAAGATGTATCAG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGCTGAGAGAATATGTGATACATCACCATGTTCAAGATGTATCAG  797

seq1  AAAGGGAGAGGTGAATAGAGCTCATTAGAGAAGAGAAGATGTTGGAAGGT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGAGGTGAATAGAGCTCATTAGAGAAGAGAAGATGTTGGAAGGT  847

seq1  AGACCCAGAAATTCCTCAGGTTGCCAGCTATCGGATGCAAATGGAGATAT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCAGAAATTCCTCAGGTTGCCAGCTATCGGATGCAAATGGAGATAT  897

seq1  GATAAGAAAGAAAGTTCAGTGAACAGATATACCTTTCATCAATCCTCAAG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGAAAGAAAGTTCAGTGAACAGATATACCTTTCATCAATCCTCAAG  947

seq1  TATGACTTACATTTCAGTCACTAACCCAATTCAACAGCTAATCGTTTAAC  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTACATTTCAGTCACTAACCCAATTCAACAGCTAATCGTTTAAC  997

seq1  ATGAAATTATTTGCTGACTATGCCTCGCTGTTAATTTCAGTAAAGAGTTA  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTATTTGCTGACTATGCCTCGCTGTTAATTTCAGTAAAGAGTTA  1047

seq1  CAGAAGCCTTTGTCGGTGGGAAGGTACCTGGGAGGGGATGGAGGGAATAA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCTTTGTCGGTGGGAAGGTACCTGGGAGGGGATGGAGGGAATAA  1097

seq1  ATGAAACAAATTGTGATTGCCTTTCAATTACAAACCCATTTAAAACTAAA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACAAATTGTGATTGCCTTTCAATTACAAACCCATTTAAAACTAAA  1147

seq1  AAATTAAGGAATTC  1151
      ||||||||||||||
seq2  AAATTAAGGAATTC  1161