BAC Information

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BAC

Clone NameB6Ng01-302L10
Chromosome10 (Build37)
Map Location 124,515,978 - 124,663,859
singlet/doubletdoublet
Overlap genenone
Upstream gene4930503E24Rik, LOC671416
Downstream geneSlc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994, Lrig3, LOC100043547
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302L10.bB6Ng01-302L10.g
ACCGA096694GA096695
length1,1451,164
definitionB6Ng01-302L10.b B6Ng01-302L10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,515,978 - 124,517,142)(124,662,719 - 124,663,859)
sequence
gaattcaaattacatgcctcctgtttcttttaacatccatggtattgtcc
aaatactctttgctttgatgtaatcactcataaaaattgggaagacaaca
tacttgctcaagggatggttatactgttgcatgggtatgtcagaaataca
ataaggctttaggactctaggaatctctgtcactgtggtatttcagtgtg
tagttctagacaatactgagaacatttctaatgctttcttggcttatctc
tatacgattctagtactttaaacctgacaatcaacagcaggaaaattttc
aaagtagaaataatcaagaaattagatgttcttgaattacttttgtgttt
tcttccaacttaaaaaagaaaagattctgttaatagaattgtgtttgttg
accagtctggttgagattggaggaatgaagctatgtacattcttaggaac
tggcttggcaaagaaaaaacaccaatgagaagacacacttagagtatgtg
agtgacaacccaagatgcattcttattaaatgtgtgacacaatggaacac
tgtgcaattagcatctccaacatcttacagaaggctgcactatgatctgt
agtttaggctcatgccttgctatctgccaagaaccaaacatccaggaagt
aaagcagaattgctcccagaagcatctcaacaggttttaaatagtttggt
gttgtcttctttttatatatttaatttaatttttttcttttttacttatt
acgtttacatcccactcactggcccccttctggccacccccttctactgt
ccttccccatctcccctccccttctcctctgggcaaatggaggccccctt
gggtgtctcctcaccctggaacttcaagtctctgtgagcgtttgctctcc
cactgatgccagacaaggcagcccatctagggacaacatatccacctata
gtcacagttttggggatagcccagactccagttgttcagaacccacatga
aggtcaagctgcacatctgtacttattgtcttctgagttttgttcaaggc
agacatccaagaaaattcttgacacagtttgcgaatggattggccagtgt
caactacttctgtcagttagagagaccggaggagctattagatag

gaattccatcccagaagacatctcttgttatacaaggaggggaaacactt
gaaaattccgccctctactgattggactacccacgactgagaatagaaca
gaaaagctggagtgtgtccccaggacacttctggcaacataagctgtggg
gactgacagacatgtagtttataacacagtagcaacatggcagagaattg
ttgttcagggtactttaggagtttgctcattttccaaacctaaagtgtct
agaaatcaatctcattcttacaacactctttgagaggtctgtgacctcct
attgtgtacataacagctaaaactaaatattatatgtctcatgtcttgtt
ttattttctgataaatagggagaattttgtgctttattattgaagtcact
tttacaatgtctcttcttcttcttcttcttcttcttcttcttcttctttt
tcttcttcttcctctcctcctcctcctccttcttcttttccttcttcttc
ttctcctcctcctcctcctcttccctccttctcctttcctttcaatagaa
gtgggtgctattcttatttcttaggatctatttagacaccacattttcag
ggtattgttaaagttttgatttgcccataacaattatacactacttcata
caggtgattttataggttcatatttagggagcaaagtaagatttggattt
tcttcatttttcaatttttcaattttcaattgctttcttgaatatgaagt
ttctaattttcagctattcaataaaaacaagatgtgccaatattgtagag
aaattaagcaggcaatatgtggctcgatatgaatttaaagaaaagttagc
cccacccagtctttttttttttttatagtcctggctgtcctggaactcac
tttgtagactagggctggccctcaaactcagaaatctgcctgcctttgcc
tccagaattgctgggactaaaggcatgcgatgcccacccaccgccccggc
cttctgaattacccttcttttataatgaattccttacctttcgtgtccac
ctcctggttgttgttcctaagaaagtcaatccctagtcacccataattgc
ttctgaatagaagtttctggcactctcttgaaaatacttagaaacttaat
atagctatcagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_124515978_124517142
seq2: B6Ng01-302L10.b_47_1191

seq1  GAATTCAAATTACATGCCTCCTGTTTCTTTTAACATCCATGGTATTGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTACATGCCTCCTGTTTCTTTTAACATCCATGGTATTGTCC  50

seq1  AAATACTCTTTGCTTTGATGTAATCACTCATAAAAATTGGGAAGACAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTCTTTGCTTTGATGTAATCACTCATAAAAATTGGGAAGACAACA  100

seq1  TACTTGCTCAAGGGATGGTTATACTGTTGCATGGGTATGTCAGAAATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCTCAAGGGATGGTTATACTGTTGCATGGGTATGTCAGAAATACA  150

seq1  ATAAGGCTTTAGGACTCTAGGAATCTCTGTCACTGTGGTATTTCAGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCTTTAGGACTCTAGGAATCTCTGTCACTGTGGTATTTCAGTGTG  200

seq1  TAGTTCTAGACAATACTGAGAACATTTCTAATGCTTTCTTGGCTTATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAGACAATACTGAGAACATTTCTAATGCTTTCTTGGCTTATCTC  250

seq1  TATACGATTCTAGTACTTTAAACCTGACAATCAACAGCAGGAAAATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACGATTCTAGTACTTTAAACCTGACAATCAACAGCAGGAAAATTTTC  300

seq1  AAAGTAGAAATAATCAAGAAATTAGATGTTCTTGAATTACTTTTGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAAATAATCAAGAAATTAGATGTTCTTGAATTACTTTTGTGTTT  350

seq1  TCTTCCAACTTAAAAAAGAAAAGATTCTGTTAATAGAATTGTGTTTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAACTTAAAAAAGAAAAGATTCTGTTAATAGAATTGTGTTTGTTG  400

seq1  ACCAGTCTGGTTGAGATTGGAGGAATGAAGCTATGTACATTCTTAGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCTGGTTGAGATTGGAGGAATGAAGCTATGTACATTCTTAGGAAC  450

seq1  TGGCTTGGCAAAGAAAAAACACCAATGAGAAGACACACTTAGAGTATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGGCAAAGAAAAAACACCAATGAGAAGACACACTTAGAGTATGTG  500

seq1  AGTGACAACCCAAGATGCATTCTTATTAAATGTGTGACACAATGGAACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAACCCAAGATGCATTCTTATTAAATGTGTGACACAATGGAACAC  550

seq1  TGTGCAATTAGCATCTCCAACATCTTACAGAAGGCTGCACTATGATCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAATTAGCATCTCCAACATCTTACAGAAGGCTGCACTATGATCTGT  600

seq1  AGTTTAGGCTCATGCCTTGCTATCTGCCAAGAACCAAACATCCAGGAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGGCTCATGCCTTGCTATCTGCCAAGAACCAAACATCCAGGAAGT  650

seq1  AAAGCAGAATTGCTCCCAGAAGCATCTCAACAGGTTTTAAATAGTTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAATTGCTCCCAGAAGCATCTCAACAGGTTTTAAATAGTTTGGT  700

seq1  GTTGTCTTCTTTTTATATATTTAATTTAATTTTTTTCTTTTTTACTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTTCTTTTTATATATTTAATTTAATTTTTTTCTTTTTTACTTATT  750

seq1  ACGTTTACATCCCACTCACTGGCCCCCTTCTGGCCACCCCCTTCTACTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTACATCCCACTCACTGGCCCCCTTCTGGCCACCCCCTTCTACTGT  800

seq1  CCTTCCCCATCTCCCCTCCCCTTCTCCTCTGGGCAAATGGAGGCCCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCATCTCCCCTCCCCTTCTCCTCTGGGCAAATGGAGGCCCCCTT  850

seq1  GGGTGTCTCCTCACCCTGGAACTTCAAGTCTCTGTGAGCGTTTGCTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCTCCTCACCCTGGAACTTCAAGTCTCTGTGAGCGTTTGCTCTCC  900

seq1  CACTGATGCCAGACAAGGCAGCCCATCTA-GGACAACATATCCACCTATA  949
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CACTGATGCCAGACAAGGCAGCCCATCTAGGGACAACATATCCACCTATA  950

seq1  GTCAACAGTTTTGGGGATAGCCCAGACTCCAGTTGTTCAGAACCCACATG  999
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTC-ACAGTTTTGGGGATAGCCCAGACTCCAGTTGTTCAGAACCCACATG  999

seq1  AAGGTCAAGCTGCACATCTGTTACTTA-TGTCTTCTGAAGTTTTGTTCCA  1048
      |||||||||||||||||||| |||||| ||||||||| ||||||||| ||
seq2  AAGGTCAAGCTGCACATCTG-TACTTATTGTCTTCTG-AGTTTTGTT-CA  1046

seq1  GGGCAGACATCCAAGGAAAATTTCTTTGACAACAAGTTTGCAAATGGAAT  1098
       ||||||||||||| |||||||   ||||||   ||||||| ||||| ||
seq2  AGGCAGACATCCAA-GAAAATT--CTTGACA--CAGTTTGCGAATGG-AT  1090

seq1  TGGGCAGGTGTTAAAAACTACCTTTCTTGTCAGTAAAAGAAGAAGAACCC  1148
      ||| || ||||    ||||||  ||| ||||||| | ||    |||  ||
seq2  TGGCCA-GTGT---CAACTAC--TTC-TGTCAGTTAGAG----AGA--CC  1127

seq1  AGAGGAGCTA-TAGATAG  1165
       ||||||||| |||||||
seq2  GGAGGAGCTATTAGATAG  1145


seq1: chr10_124662719_124663859
seq2: B6Ng01-302L10.g_64_1227 (reverse)

seq1  TGTCTGATAGCTATATT-AGTTTCTAAAGGTATTTTCAA-AGAGTGCAAG  48
      ||||||||||||||||| |||||||||  |||||||||| ||||||| ||
seq2  TGTCTGATAGCTATATTAAGTTTCTAA--GTATTTTCAAGAGAGTGCCAG  48

seq1  AAA-TTCTTATCAGAAGCATTTATGGTTGACTAGG--ATGAC-TTCTTTG  94
      ||| ||||  ||||||||| |||||| ||||||||   |||| ||||| |
seq2  AAACTTCTATTCAGAAGCAATTATGGGTGACTAGGGATTGACTTTCTTAG  98

seq1  G----ACACACAGGA-GTGAACACG-AAGGT-AGGAA-TCA-TAT-AAAG  134
      |    |||  ||||| ||| ||||| ||||| ||||| ||| ||| ||||
seq2  GAACAACAACCAGGAGGTGGACACGAAAGGTAAGGAATTCATTATAAAAG  148

seq1  AA-GGTAATTCAGAAGCCGGGCGTGGT-----GGCATCGCATGCCTTTAG  178
      || ||||||||||||| | || | |||     ||||||||||||||||||
seq2  AAGGGTAATTCAGAAGGCCGGGGCGGTGGGTGGGCATCGCATGCCTTTAG  198

seq1  TCCCAGC-ATTCTGGAGGCAAAGGCAGGCAGATTTCTGAGTTTGA-GGCC  226
      ||||||| ||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCCAGCAATTCTGGAGGCAAAGGCAGGCAGATTTCTGAGTTTGAGGGCC  248

seq1  AG-CCTAGTCTACAAAGTGAGTTCCAGGACAGCCAGGACTAT-AAAAAAA  274
      || ||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCCCTAGTCTACAAAGTGAGTTCCAGGACAGCCAGGACTATAAAAAAAA  298

seq1  AAAAAGACTGGGTGGGGCTAACTTTTCTTTAAATTCATATCGAGCCACAT  324
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACTGGGTGGGGCTAACTTTTCTTTAAATTCATATCGAGCCACAT  348

seq1  ATTGCCCTGCTTAATTTCTCTACAATATTGGCACATCTTGTTTTTATTGA  374
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTG-CCTGCTTAATTTCTCTACAATATTGGCACATCTTGTTTTTATTGA  397

seq1  ATAGCTGAAAATTAGAAACTTCATATTCAAGAAAGCAATTGAAAATTGAA  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGAAAATTAGAAACTTCATATTCAAGAAAGCAATTGAAAATTGAA  447

seq1  AAATTGAAAAATGAAGAAAATCCAAATCTTACTTTGCTCCCTAAATATGA  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAAAATGAAGAAAATCCAAATCTTACTTTGCTCCCTAAATATGA  497

seq1  ACCTATAAAATCACCTGTATGAAGTAGTGTATAATTGTTATGGGCAAATC  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAAAATCACCTGTATGAAGTAGTGTATAATTGTTATGGGCAAATC  547

seq1  AAAACTTTAACAATACCCTGAAAATGTGGTGTCTAAATAGATCCTAAGAA  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTAACAATACCCTGAAAATGTGGTGTCTAAATAGATCCTAAGAA  597

seq1  ATAAGAATAGCACCCACTTCTATTGAAAGGAAAGGAGAAGGAGGGAAGAG  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATAGCACCCACTTCTATTGAAAGGAAAGGAGAAGGAGGGAAGAG  647

seq1  GAGGAGGAGGAGGAGAAGAAGAAGAAGGAAAAGAAGAAGGAGGAGGAGGA  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAGGAGGAGAAGAAGAAGAAGGAAAAGAAGAAGGAGGAGGAGGA  697

seq1  GGAGAGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAAGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  747

seq1  AGAAGAGACATTGTAAAAGTGACTTCAATAATAAAGCACAAAATTCTCCC  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGACATTGTAAAAGTGACTTCAATAATAAAGCACAAAATTCTCCC  797

seq1  TATTTATCAGAAAATAAAACAAGACATGAGACATATAATATTTAGTTTTA  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCAGAAAATAAAACAAGACATGAGACATATAATATTTAGTTTTA  847

seq1  GCTGTTATGTACACAATAGGAGGTCACAGACCTCTCAAAGAGTGTTGTAA  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTATGTACACAATAGGAGGTCACAGACCTCTCAAAGAGTGTTGTAA  897

seq1  GAATGAGATTGATTTCTAGACACTTTAGGTTTGGAAAATGAGCAAACTCC  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGATTGATTTCTAGACACTTTAGGTTTGGAAAATGAGCAAACTCC  947

seq1  TAAAGTACCCTGAACAACAATTCTCTGCCATGTTGCTACTGTGTTATAAA  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTACCCTGAACAACAATTCTCTGCCATGTTGCTACTGTGTTATAAA  997

seq1  CTACATGTCTGTCAGTCCCCACAGCTTATGTTGCCAGAAGTGTCCTGGGG  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGTCTGTCAGTCCCCACAGCTTATGTTGCCAGAAGTGTCCTGGGG  1047

seq1  ACACACTCCAGCTTTTCTGTTCTATTCTCAGTCGTGGGTAGTCCAATCAG  1074
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCCAGCTTTTCTGTTCTATTCTCAGTCGTGGGTAGTCCAATCAG  1097

seq1  TAGAGGGCGGAATTTTCAAGTGTTTCCCCTCCTTGTATAACAAGAGATGT  1124
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGGCGGAATTTTCAAGTGTTTCCCCTCCTTGTATAACAAGAGATGT  1147

seq1  CTTCTGGGATGGAATTC  1141
      |||||||||||||||||
seq2  CTTCTGGGATGGAATTC  1164


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