BAC Information

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BAC

Clone NameB6Ng01-302L18
Chromosome10 (Build37)
Map Location 126,507,039 - 126,508,185
singlet/doubletsinglet
Overlap geneTspan31
Upstream geneLOC100043547, LOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4
Downstream geneCentg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302L18.bB6Ng01-302L18.g
ACCGA096708GA096709
length1,150962
definitionB6Ng01-302L18.b B6Ng01-302L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctcttcgccggaagtttctgggaagcttcccagaacccccagt
acacccctctccacgccggaagtcccctagaaactcccccattctttccg
ccccggagatttatccatttccaaaacctcaccatataaaccacgttgag
agcgcacagcgcattcctggaacaggcaaatccgccgcaaaccatctccc
cagatctggggacccaaatggtcccaagacttgtggggagggtatcgagg
accgtcttgtaggactcccaaccgcgtctatcgctttaaatccaagccac
ccaaaccaattctctgcgcctgcaccgtcccacccctgcttctggattgg
tgaaactcgtggctaatccaagacatccaggacttcaatgccaatcaatc
tgcattacgtcaccagcctgcctcccagtcttgcccttagtttcttcatt
ggaggaaacttaaaaaaaaaaaaaaaagaagaagaagaagaggaaggcga
aagaaagaaagaaaccgaggccagggtttctagacagtgtcttagagacc
agaagctaactaaaaaaaaaaaaaaaaaatcttggattcctgagtacgga
atttcgagactaggaacccgaggagatactcaggagactcaggtgaacag
aaaaaaggggtttcgtagaggtgagaggaaggggctctgcacctctaaag
gtaacccttttccgccgatttcccgtgtttcccgatgatctcacgttggt
gccatcgtttcactgttatactctggaacagtcatactctggaacagcac
gaggagccaaatgcactatgaagcccagctagagaggatccaagtcgggc
gtagcattagcgggcaaatcctcacgcatttgttaactgtgtttgctaag
tactcacgttccgttctgcatccctttcccttgcagtgtggacacgccag
aaattcagttggaaacagttgacttgaggccggcgcattccttgttcgtt
gaacaaaccacagcacagacgcttggttgtgcctcctacaatctttagaa
acacaacgtgctgatcaagcttgcacatgacgcaaagtggggggcgagtc
tgtattgaattaataagagccttcatacgtctcttttaattttaattttt

gaattcaaactgtgggctgggactgtagtttacctgatagagtgcttgcc
tggtgtgcatgaaaaccagcaccaaataaaccaggcatggtggtccaagc
ctctaattcctgcactcaggactgggaagcaggagtttgagaagttctag
gtcatctttagctacagagtgagttagagaccagcctgggctacctgaga
ccctgtgtcaaaaagaagaaaattcacattgcaagccagtttcttgcgga
gtggggaagaccaagtgtttatttgctttatttttagtaattaacaatta
ttaatgttttattatattttatgtgtatgggtattttacctgcctgtatg
ataggcaaatgtgtattatatgcatgcttggtgtctgaagaggtcagaaa
agaccttttgatttcctgcaactggagttacatgtggttgtgagccacca
catgggtgctaggaactgaaccggggtcctctggaagagctatctctcca
ctccaagtgtctaaagtcagctttattagaggacagtctggcaacatctg
actccgactcggaaaacaaaacagacatgggctgaagagttggctccgtg
gtgaggagcactgttcctccagagcactgtctctaggtgactgactcagg
tagcttgcaacggcctagaactttagttccaagggatcctctccctgggg
cattcacacagacacataaataaagatttttaaatagaagtgtttggctg
ggttgtggtggcacatacctttaatccctagcatctctgagtttaagacg
ggatctgtgagttccaggacagggctacacagaaaaaaccctggtcccca
aaaaccaaccaaatcagacaaaacaaaaccaccgagaactttaatagctt
ggtagtggtggtaccttgcccttagtcccagctcctgggaaggtagaagg
cagggcatcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126507039_126508185
seq2: B6Ng01-302L18.b_49_1198

seq1  GAATTCCCTCTTCGCCGGAAGTTTCTGGGAAGCTTCCCAGAACCCCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTTCGCCGGAAGTTTCTGGGAAGCTTCCCAGAACCCCCAGT  50

seq1  ACACCCCTCTCCACGCCGGAAGTCCCCTAGAAACTCCCCCATTCTTTCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCTCTCCACGCCGGAAGTCCCCTAGAAACTCCCCCATTCTTTCCG  100

seq1  CCCCGGAGATTTATCCATTTCCAAAACCTCACCATATAAACCACGTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGAGATTTATCCATTTCCAAAACCTCACCATATAAACCACGTTGAG  150

seq1  AGCGCACAGCGCATTCCTGGAACAGGCAAATCCGCCGCAAACCATCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCACAGCGCATTCCTGGAACAGGCAAATCCGCCGCAAACCATCTCCC  200

seq1  CAGATCTGGGGACCCAAATGGTCCCAAGACTTGTGGGGAGGGTATCGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTGGGGACCCAAATGGTCCCAAGACTTGTGGGGAGGGTATCGAGG  250

seq1  ACCGTCTTGTAGGACTCCCAACCGCGTCTATCGCTTTAAATCCAAGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCTTGTAGGACTCCCAACCGCGTCTATCGCTTTAAATCCAAGCCAC  300

seq1  CCAAACCAATTCTCTGCGCCTGCACCGTCCCACCCCTGCTTCTGGATTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAATTCTCTGCGCCTGCACCGTCCCACCCCTGCTTCTGGATTGG  350

seq1  TGAAACTCGTGGCTAATCCAAGACATCCAGGACTTCAATGCCAATCAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTCGTGGCTAATCCAAGACATCCAGGACTTCAATGCCAATCAATC  400

seq1  TGCATTACGTCACCAGCCTGCCTCCCAGTCTTGCCCTTAGTTTCTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTACGTCACCAGCCTGCCTCCCAGTCTTGCCCTTAGTTTCTTCATT  450

seq1  GGAGGAAACTTAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAGGAAGGCGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAACTTAAAAAAAAAAAAAAAAGAAGAAGAAGAAGAGGAAGGCGA  500

seq1  AAGAAAGAAAGAAACCGAGGCCAGGGTTTCTAGACAGTGTCTTAGAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAACCGAGGCCAGGGTTTCTAGACAGTGTCTTAGAGACC  550

seq1  AGAAGCTAACTAAAAAAAAAAAAAAAAAATCTTGGATTCCTGAGTACGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTAACTAAAAAAAAAAAAAAAAAATCTTGGATTCCTGAGTACGGA  600

seq1  ATTTCGAGACTAGGAACCCGAGGAGATACTCAGGAGACTCAGGTGAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCGAGACTAGGAACCCGAGGAGATACTCAGGAGACTCAGGTGAACAG  650

seq1  AAAAAAGGGGTTTCGTAGAGGTGAGAGGAAGGGGCTCTGCACCTCTAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGGGTTTCGTAGAGGTGAGAGGAAGGGGCTCTGCACCTCTAAAG  700

seq1  GTAACCCTTTTCCGCCGATTTCCCGTGTTTCCCGATGATCTCACGTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCTTTTCCGCCGATTTCCCGTGTTTCCCGATGATCTCACGTTGGT  750

seq1  GCCATCGTTTCACTGTTATACTCTGGAACAGTCATACTCTGGAACAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCGTTTCACTGTTATACTCTGGAACAGTCATACTCTGGAACAGCAC  800

seq1  GAGGAGCCAAATGCACTATGAAGCCCAGCTAGAGAGGATCCAAGTCGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCCAAATGCACTATGAAGCCCAGCTAGAGAGGATCCAAGTCGGGC  850

seq1  GTAGCATTAGCGGGCAAATCCTCACGCATTTGTTAACTGTGTTTGCT-AG  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTAGCATTAGCGGGCAAATCCTCACGCATTTGTTAACTGTGTTTGCTAAG  900

seq1  TACTCACGTTCCGTTCTGCATCCCTTTCCC-TGCAGTGTGGACACGCCAG  948
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TACTCACGTTCCGTTCTGCATCCCTTTCCCTTGCAGTGTGGACACGCCAG  950

seq1  AAATTCAGGTGGAAACAG-TGACTTGAGGCCGGCGCATTCC-TGTTCG-T  995
      |||||||| ||||||||| |||||||||||||||||||||| |||||| |
seq2  AAATTCAGTTGGAAACAGTTGACTTGAGGCCGGCGCATTCCTTGTTCGTT  1000

seq1  GACAAAACCACAGGCACAGACGCT--GGTGTGC--TCTAC-ATCTTTAGA  1040
      ||  |||||||| |||||||||||  | |||||   |||| |||||||||
seq2  GAACAAACCACA-GCACAGACGCTTGGTTGTGCCTCCTACAATCTTTAGA  1049

seq1  ACACA-AACGTGCTGGATCAGGCTTGGCACATGACGCAAAGT-GGGGGCG  1088
      | ||| |||||||| ||||| |||| |||||||||||||||| |||||||
seq2  A-ACACAACGTGCT-GATCAAGCTT-GCACATGACGCAAAGTGGGGGGCG  1096

seq1  AGTCTGGAATATGAATAAATAAGAGCCTCCATACTGTCTCTTTTTAAATT  1138
      |||||| |   ||||| ||||||||||| ||||| |||||||||  ||||
seq2  AGTCTGTA--TTGAATTAATAAGAGCCTTCATAC-GTCTCTTTT--AATT  1141

seq1  TTTATTTTT  1147
      || ||||||
seq2  TTAATTTTT  1150