BAC Information

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BAC

Clone NameB6Ng01-303L12
Chromosome10 (Build37)
Map Location 32,255,151 - 32,397,097
singlet/doubletdoublet
Overlap geneTcba1
Upstream geneIbrdc1, LOC666055, LOC667752, LOC100040638
Downstream geneEG667761, Trdn, A330019N05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303L12.bB6Ng01-303L12.g
ACCGA097451GA097452
length1,1401,088
definitionB6Ng01-303L12.b B6Ng01-303L12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,255,151 - 32,256,290)(32,396,009 - 32,397,097)
sequence
gaattcctccccttattgatattttaggaagtatgtgtgatgcatttatg
tccaattaaagagatatataaggattatttcagatggtcagtaatgcttt
aacattgtctaataggatgtttttatggaagaaattgatattatctgtag
gaattacaaaagactctttgaacaggttgaacacatgcacagaaaggata
cagctcctggaaattgtcttttataactctgtgaataattgagttggatt
ttgatgagaattgcattgaatctgcatatggctttcggcaagatagccat
ttttactatattaatcctgccaatccatgagcatgggagagctttccatc
ttctgggaatttcttctaatactttcttcagagacttcaattaaaatggg
ccagttacccatctaagcctgaggcctgatgctccaaatcatttggcctg
ttatttgtccagtcttgggaatgatcatttttttaagcatacaagatgat
cgttgttttcaagcatacaaatagtgtatctaagtatacatcttaagtca
cctaaaaatgtatagttaagaagactagttttcttacatatttatgttgt
ctaatttattttagaaatacagaaacacagttttaatgtggagtgttagg
cctttaaaattagttatataacactcagcataggtcttgaatcaatggag
aaaatctcatcaaagtaactgaccaatttcttcacagcagcatatatact
acttgtgagaagacaaattccccacacacaaacctattgacaacattttg
ttcccaggcaaaattccaaaatttcaatcagccccattgtattttttgtt
caccaagattgtatatggctctgaatccaggcaagaactttcatgtaatc
agtatgctaattaacattgttgtggtgcagtatctgagggttgagtgtta
atagtgtgaatgtagttagaatgagaagtttctagaagacagtgtttggc
tcacatacagagaccataccaatcagtgccctcaggtttattatttctca
tgagatgcagaacaaatccaaatctcaattctgtggaatcaaggacccga
atgccagcagcaatcaagtttttgtccctcttttaagttg

gaattctggagaggtcaacaaagtcacttagacaagggcccaagcctggt
gacatgcatttgctaaagagagaaatctcttttacccgttagtctagctc
catgatggaaactgctttaaagaaaatgcaatttaaatgtgatcaaagag
caggcatacctagattaaatagtcttttgtacatttcgaatatatcaacg
tccccaaaagctattcttgccataaaggttcagaataagatgtcttattc
actgctccagttgcacaaagccttcatttgtaaatctcttctgagagttt
tcttggctcagtgcttgagtagttactaaacactctacaaatttgttata
aaagagaaaacaaatgtgtccaatccaattggctggatgcacatgctcac
tctgtcaacccttattactattattttaacaaatggttaataaaaatgca
ttgttggaattaagtgctgaactttctcatatggatttgttttgattttc
taacaaattaggtggcaaccttgatagatgagagtgtttcacaattcatt
ataaacttcatagatcagataaaaagctgagtgtaggcattaaatgctat
gtgtagagaaaatttgatccacatggaggatatcacaaaaggaagactgt
gacagtggcaggtgttatttattacttgattgttttaactccttttccat
ttactttatctttttttattttttatgttggcctggtgtcttgtattgat
ttctactgaaagggaaacctcagtatattaataagggtaattagtaaaaa
aagaagagagaggtttattttgttttaaattttcaattgtgtatggatgc
tttgcctgcatctatgtctgtctatatgcaacgtgcatgcctggtgacct
cagaggccaggaacaggccttgggataccatggaactaggctgacaaatg
atttcgagcctccttgtggatgataggataatctaggaagagtgctctta
actgccattaactgccaaactatttttccaccccaaagttgttgttgttg
tttttcaaaatggtttcttctggtgcatcactggataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_32255151_32256290
seq2: B6Ng01-303L12.b_43_1182

seq1  GAATTCCTCCCCTTATTGATATTTTAGGAAGTATGTGTGATGCATTTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCCTTATTGATATTTTAGGAAGTATGTGTGATGCATTTATG  50

seq1  TCCAATTAAAGAGATATATAAGGATTATTTCAGATGGTCAGTAATGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTAAAGAGATATATAAGGATTATTTCAGATGGTCAGTAATGCTTT  100

seq1  AACATTGTCTAATAGGATGTTTTTATGGAAGAAATTGATATTATCTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTCTAATAGGATGTTTTTATGGAAGAAATTGATATTATCTGTAG  150

seq1  GAATTACAAAAGACTCTTTGAACAGGTTGAACACATGCACAGAAAGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACAAAAGACTCTTTGAACAGGTTGAACACATGCACAGAAAGGATA  200

seq1  CAGCTCCTGGAAATTGTCTTTTATAACTCTGTGAATAATTGAGTTGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTGGAAATTGTCTTTTATAACTCTGTGAATAATTGAGTTGGATT  250

seq1  TTGATGAGAATTGCATTGAATCTGCATATGGCTTTCGGCAAGATAGCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAGAATTGCATTGAATCTGCATATGGCTTTCGGCAAGATAGCCAT  300

seq1  TTTTACTATATTAATCCTGCCAATCCATGAGCATGGGAGAGCTTTCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTATATTAATCCTGCCAATCCATGAGCATGGGAGAGCTTTCCATC  350

seq1  TTCTGGGAATTTCTTCTAATACTTTCTTCAGAGACTTCAATTAAAATGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGAATTTCTTCTAATACTTTCTTCAGAGACTTCAATTAAAATGGG  400

seq1  CCAGTTACCCATCTAAGCCTGAGGCCTGATGCTCCAAATCATTTGGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTACCCATCTAAGCCTGAGGCCTGATGCTCCAAATCATTTGGCCTG  450

seq1  TTATTTGTCCAGTCTTGGGAATGATCATTTTTTTAAGCATACAAGATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTCCAGTCTTGGGAATGATCATTTTTTTAAGCATACAAGATGAT  500

seq1  CGTTGTTTTCAAGCATACAAATAGTGTATCTAAGTATACATCTTAAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTTTTCAAGCATACAAATAGTGTATCTAAGTATACATCTTAAGTCA  550

seq1  CCTAAAAATGTATAGTTAAGAAGACTAGTTTTCTTACATATTTATGTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAATGTATAGTTAAGAAGACTAGTTTTCTTACATATTTATGTTGT  600

seq1  CTAATTTATTTTAGAAATACAGAAACACAGTTTTAATGTGGAGTGTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTATTTTAGAAATACAGAAACACAGTTTTAATGTGGAGTGTTAGG  650

seq1  CCTTTAAAATTAGTTATATAACACTCAGCATAGGTCTTGAATCAATGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAATTAGTTATATAACACTCAGCATAGGTCTTGAATCAATGGAG  700

seq1  AAAATCTCATCAAAGTAACTGACCAATTTCTTCACAGCAGCATATATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTCATCAAAGTAACTGACCAATTTCTTCACAGCAGCATATATACT  750

seq1  ACTTGTGAGAAGACAAATTCCCCACACACAAACCTATTGACAACATTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGAGAAGACAAATTCCCCACACACAAACCTATTGACAACATTTTG  800

seq1  TTCCCAGGCAAAATTCCAAAATTTCAATCAGCCCCATTGTATTTTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGCAAAATTCCAAAATTTCAATCAGCCCCATTGTATTTTTTGTT  850

seq1  CACCAAGATTGTATATGGCTCTGAATCCAGGCAAGAACTTTCATGTAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGATTGTATATGGCTCTGAATCCAGGCAAGAACTTTCATGTAATC  900

seq1  AGTATGCTAATTAACATTGTTGTGGTGCAGTATCTGAGGGTTGAGTGTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCTAATTAACATTGTTGTGGTGCAGTATCTGAGGGTTGAGTGTTA  950

seq1  ATAGTGTGAATGTAGTTAGAATGAGAAGTTTCTAGAAGACAGTGTTTGGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGAATGTAGTTAGAATGAGAAGTTTCTAGAAGACAGTGTTTGGC  1000

seq1  TCACATACAGAGACCCATAACAATCAAGTGCCCTCAGG-TTATTATTTCC  1049
      ||||||||||||| ||||| ||||| |||||||||||| ||||||||| |
seq2  TCACATACAGAGA-CCATACCAATC-AGTGCCCTCAGGTTTATTATTT-C  1047

seq1  TCATGAGGATGCAGAACAAATCCAAATTCTC-ATTCTGTGGAATC-AGGA  1097
      |||||| ||||||||||||||||||| |||| ||||||||||||| ||||
seq2  TCATGA-GATGCAGAACAAATCCAAA-TCTCAATTCTGTGGAATCAAGGA  1095

seq1  CC--GATG-CAGCAGC-ATCAGGTTTTTGTTCCCTCTTTTTAAGTTG  1140
      ||   ||| ||||||| |||| ||||||| |||||| ||||||||||
seq2  CCCGAATGCCAGCAGCAATCAAGTTTTTG-TCCCTC-TTTTAAGTTG  1140


seq1: chr10_32396009_32397097
seq2: B6Ng01-303L12.g_65_1152 (reverse)

seq1  TTATCCAGTGATGCA-CAG-AGAAACCATTTTTTGAAAAACAACAACAAC  48
      ||||||||||||||| ||| ||||||||  ||||||||||||||||||||
seq2  TTATCCAGTGATGCACCAGAAGAAACCA--TTTTGAAAAACAACAACAAC  48

seq1  AAACTTTTGGGGGTGG-AAAATAGTTTGGCAGTTAATGGCAGTTAAGAGC  97
       ||||||  ||||||| |||||||||||||||||||||||||||||||||
seq2  -AACTTT--GGGGTGGAAAAATAGTTTGGCAGTTAATGGCAGTTAAGAGC  95

seq1  ACTCTT-CTAGATTATCCTATCATCCACAAGGAGGCTCGAAATCATTTGT  146
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCCTAGATTATCCTATCATCCACAAGGAGGCTCGAAATCATTTGT  145

seq1  CAGCCTAGTTCCATGGTAT-CCAAGGCCTGTTCCTGGCCTCTGAGGTCAC  195
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAGCCTAGTTCCATGGTATCCCAAGGCCTGTTCCTGGCCTCTGAGGTCAC  195

seq1  CAGGCATGCACGTTGCATATAGACAGACATAGATGCAGGCAAAGCATCCA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGCACGTTGCATATAGACAGACATAGATGCAGGCAAAGCATCCA  245

seq1  TACACAATTGAAAATTTAAAACAAAATAAACCTCTCTCTTCTTTTTTTAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATTGAAAATTTAAAACAAAATAAACCTCTCTCTTCTTTTTTTAC  295

seq1  TAATTACCCTTATTAATATACCTGAGGTTTCCCTTTCAGTAGAAATCAAT  345
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TAATTACCCTTATTAATATA-CTGAGGTTTCCCTTTCAGTAGAAATCAAT  344

seq1  ACAAGACACCAGGCCAACATAAAAAATAAAAAAAGATAAAGTAAATGGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACACCAGGCCAACATAAAAAATAAAAAAAGATAAAGTAAATGGAA  394

seq1  AAGGAGTTAAAACAATCAAGTAATAAATAACACCTGCCACTGTCACAGTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTTAAAACAATCAAGTAATAAATAACACCTGCCACTGTCACAGTC  444

seq1  TTCCTTTTGTGATATCCTCCATGTGGATCAAATTTTCTCTACACATAGCA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTGTGATATCCTCCATGTGGATCAAATTTTCTCTACACATAGCA  494

seq1  TTTAATGCCTACACTCAGCTTTTTATCTGATCTATGAAGTTTATAATGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCCTACACTCAGCTTTTTATCTGATCTATGAAGTTTATAATGAA  544

seq1  TTGTGAAACACTCTCATCTATCAAGGTTGCCACCTAATTTGTTAGAAAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAACACTCTCATCTATCAAGGTTGCCACCTAATTTGTTAGAAAAT  594

seq1  CAAAACAAATCCATATGAGAAAGTTCAGCACTTAATTCCAACAATGCATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAATCCATATGAGAAAGTTCAGCACTTAATTCCAACAATGCATT  644

seq1  TTTATTAACCATTTGTTAAAATAATAGTAATAAGGGTTGACAGAGTGAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAACCATTTGTTAAAATAATAGTAATAAGGGTTGACAGAGTGAGC  694

seq1  ATGTGCATCCAGCCAATTGGATTGGACACATTTGTTTTCTCTTTTATAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATCCAGCCAATTGGATTGGACACATTTGTTTTCTCTTTTATAAC  744

seq1  AAATTTGTAGAGTGTTTAGTAACTACTCAAGCACTGAGCCAAGAAAACTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGTAGAGTGTTTAGTAACTACTCAAGCACTGAGCCAAGAAAACTC  794

seq1  TCAGAAGAGATTTACAAATGAAGGCTTTGTGCAACTGGAGCAGTGAATAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAGATTTACAAATGAAGGCTTTGTGCAACTGGAGCAGTGAATAA  844

seq1  GACATCTTATTCTGAACCTTTATGGCAAGAATAGCTTTTGGGGACGTTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTTATTCTGAACCTTTATGGCAAGAATAGCTTTTGGGGACGTTGA  894

seq1  TATATTCGAAATGTACAAAAGACTATTTAATCTAGGTATGCCTGCTCTTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCGAAATGTACAAAAGACTATTTAATCTAGGTATGCCTGCTCTTT  944

seq1  GATCACATTTAAATTGCATTTTCTTTAAAGCAGTTTCCATCATGGAGCTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACATTTAAATTGCATTTTCTTTAAAGCAGTTTCCATCATGGAGCTA  994

seq1  GACTAACGGGTAAAAGAGATTTCTCTCTTTAGCAAATGCATGTCACCAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAACGGGTAAAAGAGATTTCTCTCTTTAGCAAATGCATGTCACCAGG  1044

seq1  CTTGGGCCCTTGTCTAAGTGACTTTGTTGACCTCTCCAGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCCCTTGTCTAAGTGACTTTGTTGACCTCTCCAGAATTC  1088


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