BAC Information

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BAC

Clone NameB6Ng01-304A22
Chromosome10 (Build37)
Map Location 18,191,340 - 18,192,396
singlet/doubletsinglet
Overlap geneNhsl1
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a, LOC627646
Downstream geneHebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620, Olig3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304A22.bB6Ng01-304A22.g
ACCGA097705GA097706
length1,1781,059
definitionB6Ng01-304A22.b B6Ng01-304A22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagcttgaagcaatcccactaaa
atcagggactagacaaggctgcccatttctccctacctcttcaacatagt
acttgaagtattagccagagcaattagacaacaaaaggagatcaagggga
tacaaattggaaaagatgaagtcaaaatatcactttttgcagataatatg
atagtatatataagtgaccctaaaaattccaccagagaactcctaaacct
gataaacagcttcagtgaagtagctggatataaaaataactcaaacaagt
caatggcctttctctacacaaagaataaacaggctgagaaagaaattagg
gaaacaacacccttctcaatagtcacacataatataaaatatcttggcgt
gactctaactaaggaagtcaaagatctgtatgataaaaacttcaagtctc
tgaagaaagaaattaaagatctcagaagatggaaggatctcccatgctca
tggattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaat
ctacagattcaatgcaatccccatcaaaattccaactcaattcttcaacg
aattagaaagagcaatctgcaaattcatctggaataacaaaaaacctagg
atagcaaaaactcttctcaaggataaaagaacctctggtggaatcaccat
gcctgacctaaagctttactacagagcaattgttataaaaacttcatggt
actggtatagtgacagacaagtagaccaatggaatagaattgaagaccca
gaaatgaacccacacacctatggtcacttgatcttcgacaaagggagcta
aaaccatccagtggaagaaagacagcattttcaacaattgggtgctggca
caattgggttgttatcatgtagaagatgcgaatcgacccattcctctctc
cttgtactaagatcaatctaagtggatcagactccacataaaacagagac
actgaactatagaggagaaagtgggaaaggtctcgaagattggcacaggc
aaaaatcttgaatagaacagccaatggctgtctgtagatcaggaatggac
tatcggactctatgaagctgccaaagcc
gaattcattgtctgggccacagccttgctttatttattacgttactttat
gagccaccttagtctacttgggctctacagtagtcgtcttattactgcat
tatagggtgtgtttagttaattttaagtatgttcaaacagagtcattagt
tcacttatttttcttttcatgttcttttgagattgcgtttcatcatctag
ttcccaggtctacactctgccgttctgggcaactgtctgttgcagagcag
tcagggtagacgtacttctgactcatagtcatagcatttccgggctctgc
ttgagttaggtttgccaccctggtacatgcccagttcaaaggcttgcttt
tccttaagtctagtctctcctgtgcgtaataagcatgtggcagatacata
gaaagtattgaaatgctgctgatgaatgcatttgggtgctgccagcttct
gggcagccactcataccccaggatagtcagtgttaatgggaaatacagaa
caaagagatcccaagccccagtggaatgtaagaaaattatctcagaaatt
catcttaggttcagtgtctctgtgagtttccgccccagcaaggttttgga
ctgttttgcgttgaaaattttcaagtaaattggtttgtgttaaagtcaac
tgcattaacatttaaaaaacatttaatacggaagtatcccataagagcat
aaatgagagaattgtatagcacagatggcgttcgaacagaacgtactagg
ttttaaagtttttatttacacttgtaacaatggtgttttttaaagttatt
tgatagagaaatatttgattccaaccttgtggcgggggagtttgtttcgt
tcttgtacagttggtaaatttgagtttgttgtgtgtggataaagaggaat
gagaggtctctgtcaagttttgtccattgttctctaaaacagaaactgga
agagggactatgattttgggggtgcaggaagctgagccaaacatgctatg
aacatattgtgtggtgattgatagtcctcgctttttctcttaacgatggt
agctcagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_18191340_18192396
seq2: B6Ng01-304A22.g_66_1124

seq1  GAATTCATTGTCTGGGCCACAGCCTTGCTTTATTTATTACGTTACTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTCTGGGCCACAGCCTTGCTTTATTTATTACGTTACTTTAT  50

seq1  GAGCCACCTTAGTCTACTTGGGCTCTACAGTAGTCGTCTTATTACTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACCTTAGTCTACTTGGGCTCTACAGTAGTCGTCTTATTACTGCAT  100

seq1  TATAGGGTGTGTTTAGTTAATTTTAAGTATGTTCAAACAGAGTCATTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGTGTGTTTAGTTAATTTTAAGTATGTTCAAACAGAGTCATTAGT  150

seq1  TCACTTATTTTTCTTTTCATGTTCTTTTGAGATTGCGTTTCATCATCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTATTTTTCTTTTCATGTTCTTTTGAGATTGCGTTTCATCATCTAG  200

seq1  TTCCCAGGTCTACACTCTGCCGTTCTGGGCAACTGTCTGTTGCAGAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGTCTACACTCTGCCGTTCTGGGCAACTGTCTGTTGCAGAGCAG  250

seq1  TCAGGGTAGACGTACTTCTGACTCATAGTCATAGCATTTCCGGGCTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTAGACGTACTTCTGACTCATAGTCATAGCATTTCCGGGCTCTGC  300

seq1  TTGAGTTAGGTTTGCCACCCTGGTACATGCCCAGTTCAAAGGCTTGCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTAGGTTTGCCACCCTGGTACATGCCCAGTTCAAAGGCTTGCTTT  350

seq1  TCCTTAAGTCTAGTCTCTCCTGTGCGTAATAAGCATGTGGCAGATACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAGTCTAGTCTCTCCTGTGCGTAATAAGCATGTGGCAGATACATA  400

seq1  GAAAGTATTGAAATGCTGCTGATGAATGCATTTGGGTGCTGCCAGCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATTGAAATGCTGCTGATGAATGCATTTGGGTGCTGCCAGCTTCT  450

seq1  GGGCAGCCACTCATACCCCAGGATAGTCAGTGTTAATGGGAAATACAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCCACTCATACCCCAGGATAGTCAGTGTTAATGGGAAATACAGAA  500

seq1  CAAAGAGATCCCAAGCCCCAGTGGAATGTAAGAAAATTATCTCAGAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGATCCCAAGCCCCAGTGGAATGTAAGAAAATTATCTCAGAAATT  550

seq1  CATCTTAGGTTCAGTGTCTCTGTGAGTTTCCGCCCCAGCAAGGTTTTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAGGTTCAGTGTCTCTGTGAGTTTCCGCCCCAGCAAGGTTTTGGA  600

seq1  CTGTTTTGCGTTGAAAATTTTCAAGTAAATTGGTTTGTGTTAAAGTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGCGTTGAAAATTTTCAAGTAAATTGGTTTGTGTTAAAGTCAAC  650

seq1  TGCATTAAACATTTAAAAAACATTTAATACGGAAGTATCCCATAAGAGCA  700
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATT-AACATTTAAAAAACATTTAATACGGAAGTATCCCATAAGAGCA  699

seq1  TAAATGAGAGAATTGTATAGCACAGATGGCGTTCGAACAGAACGTACTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGAGAATTGTATAGCACAGATGGCGTTCGAACAGAACGTACTAG  749

seq1  GTTTTAAAGTTTTTATTTACACTTGTAACAATGGTGTTTTTTAAAGTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAGTTTTTATTTACACTTGTAACAATGGTGTTTTTTAAAGTTAT  799

seq1  TTGATAGAGAAATATTTGATTCCAACCTTGTGGCGGGGGAGTTTGTTTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGAGAAATATTTGATTCCAACCTTGTGGCGGGGGAGTTTGTTTCG  849

seq1  TTCTTGTACAGTTGGTAAATTTGAGTTTGTTGTGTGTGGATAAAGAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTACAGTTGGTAAATTTGAGTTTGTTGTGTGTGGATAAAGAGGAA  899

seq1  TGAGAGGTCTCTGTCAAG-TTTGTCCATTGTTCTTCTAAAACAAGAACTG  949
      |||||||||||||||||| |||||||||||||| |||||||||  |||||
seq2  TGAGAGGTCTCTGTCAAGTTTTGTCCATTGTTC-TCTAAAACAGAAACTG  948

seq1  GAAGAGGAACTATGATTTT-GGGGTGCAGGAAGCTGAG-CAAACATGCTA  997
      ||||||| ||||||||||| |||||||||||||||||| |||||||||||
seq2  GAAGAGGGACTATGATTTTGGGGGTGCAGGAAGCTGAGCCAAACATGCTA  998

seq1  TGAACATATTGTGTGGTGGTTGGATAGTTCTCGCTTTTTCTC-TACAGAT  1046
      |||||||||||||||||| || |||||| ||||||||||||| ||  |||
seq2  TGAACATATTGTGTGGTGATT-GATAGTCCTCGCTTTTTCTCTTAACGAT  1047

seq1  -GTAGCTCAGTG  1057
       |||||||||||
seq2  GGTAGCTCAGTG  1059