BAC Information

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BAC

Clone NameB6Ng01-305B22
Chromosome10 (Build37)
Map Location 90,269,706 - 90,382,715
singlet/doubletdoublet
Overlap geneAnks1b
Upstream geneE030041M21Rik, E530015N03Rik, LOC100043039, LOC544719
Downstream geneApaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305B22.bB6Ng01-305B22.g
ACCGA098491GA098492
length1,0551,147
definitionB6Ng01-305B22.b B6Ng01-305B22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,381,666 - 90,382,715)(90,269,706 - 90,270,849)
sequence
gaattctgttagatgggacagagggaactaccaaagatagaaagcacgag
aaaagggccttgccttttggatgtttctaactggctttgagaaaaaagaa
aaaaaaaaaaaacaagtggaaaaattgtgagccctgtagaaatgcatggg
ccttgtcacagctgtgcacctggagcatgtcttctgtatgtgggtcacct
agcatcacaggtgagccttgctagcatcgtgcccagccttcagctcctcc
tgggaacatgtgtctaatgagaacaccacatgcctttgctctgttctcag
ccattgtctgcatttgttctagttgggggcttgcttgtattgactgctcc
acctagtctcagatgtcttgacacatatcacttaaaacatagcataacat
ttaagaactataacattaacattaacacttttccccttgactttatggcc
cattcctgattcattataaaattttatctttatatgaattatttgtaaaa
gtaataatggactgcaattaacttcaagattaagcttttctctgatttta
tatttttgacctttgcttctctttctttctctctctctctctctctctct
ctctctctctctctctctcaaatgtatgacttataatttctctcgttcaa
gagagctcgtgatgcattgcccttaaaaactcatgcagatgtcaccctga
atgctgtgaagaatcactgattatttttgtctgaacataataacctttta
tgactctggaagcgctgcaacgaagagttcttcaaagctctccccaaatc
gagcaacatccctcacttccccattcgactgctctctctcacgtgttcgc
ttgagcaaggaacctgacctagcatgcggggtgttgtacacttcagttca
caggtcgatgctgataacacacaacaggagtgtggcacgcacctctgctg
gaatgcatacaaaaggaaaaatgtggagggagctcgcaaatgctcgctga
tgcagtgcagatatggacatctcgaccgagcagcagaacttcacactggc
tctat
gaattcctatgcctcaaataaaaatccaaaggcaaaatgtcatattttga
aggaatatttgtaaaataagccagcaagcattgctcttgttatgtaataa
ttgtggatagatcagtgagaaacataaaaagaacccaaaagccaactgga
caaaagatgttctctattcacagaacaagcacagatgtcccacaacgtat
aaaaaaaaccacacaagcaattaaagtaatagcttctattttcacctttt
tttctaagatttccttattttatttatgagtacactgttgctgacttcgg
atacacaccagaagagggagtcagatcccaatccggatcactgtaatgcc
accttgttgttgctgagaattgaactcagggcctctggaaaaccagccag
tgagtgctcttaactagtgagccatttctccagcccccttctttttacct
tttaaactgaccaagacatggtattattacatatgctaaaacacacactc
ttatataatactgaagggagcagaaaaccaatgctattcaccatgagatg
gagatgcatattttcctcaggaagcttaaggggacaacaccctataccca
aggactcattgtgagactgattagaaatgccacaatggttggcatgtgag
gatattcattatggtattcattttaatacagaggaaaactaaaatgatct
actgtcaggatacttttaaatacactgtggtatgtcgagcacctcctcat
ttcacacacttgtcttccttagcatccctcgggcattcttcagtgatttc
tgtgactatagctgtctgctcatagctcctgctgactggttctgtctgct
tgtacgtggtccaattctccctccgccccaatttcatctctctctatggg
agcaccttctaggtttctacccctgtaacaactgcccaattttcttcctc
tccttaaatgtaaactcctaagaagagactcactcatgaagcagagtcac
actggtctctggcatggtactccaggactcttcgatgaggagtagtggcg
tactgtttgggtacaggaacacagctgaccaagcatgaatatagccttgt
tgtgtagcagtcacggactcggcagttgcattcttagccatacagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90381666_90382715
seq2: B6Ng01-305B22.b_42_1096 (reverse)

seq1  ATAGGGCCAGTGTGAAGTTCTGTTGCTCGGTCGAGTTGT-CATGTCAGCA  49
      |||| ||||||||||||||||| |||||||||||| ||| ||| || |||
seq2  ATAGAGCCAGTGTGAAGTTCTGCTGCTCGGTCGAGATGTCCATATCTGCA  50

seq1  CTGGTTCAGCGGACGTTT-CGATGTCAC-CCA-AATCTTCCTTTTGTAT-  95
      |||  ||||||  | ||| |||  || | ||| | | |||||||||||| 
seq2  CTGCATCAGCGAGCATTTGCGAGCTCCCTCCACATTTTTCCTTTTGTATG  100

seq1  CATTCCA-CAGAGTTGCGTG-CAAACTCCTGTTGTTCTGTTAACGGCATC  143
      ||||||| ||||| |||||| || |||||||||| | ||||| | |||||
seq2  CATTCCAGCAGAGGTGCGTGCCACACTCCTGTTG-TGTGTTATCAGCATC  149

seq1  -ACCTGTG-ACTTAAGTGTACAACA-CCTGTTTGCTATGTCATTGTTGCT  190
       ||||||| ||| |||||||||||| || |  ||||| ||||  ||| ||
seq2  GACCTGTGAACTGAAGTGTACAACACCCCGCATGCTAGGTCA-GGTTCCT  198

seq1  TTCTCAAGGGAACACGGGAGGGAGAGAAGTCGAATGGGGAAACTGAGGGA  240
      | |||||| ||||||| ||| ||||| |||||||||||| || |||||||
seq2  TGCTCAAGCGAACACGTGAGAGAGAGCAGTCGAATGGGG-AAGTGAGGGA  247

seq1  TGTTTGCTAGATTTGGGGAGAGCTTTGAAGAACTCATAGCTGCAGCGCTT  290
      || ||||| |||||||||||||||||||||||||| | | ||||||||||
seq2  TG-TTGCTCGATTTGGGGAGAGCTTTGAAGAACTCTTCGTTGCAGCGCTT  296

seq1  CCAGAGTCATAAAAGGTTATTATGCTCAGCTTAAAAATAATAATGAATTC  340
      |||||||||||||||||||||||| ||||   ||||||||| |   ||||
seq2  CCAGAGTCATAAAAGGTTATTATGTTCAG-ACAAAAATAATCAGTGATTC  345

seq1  CTCAGAGCATTCAGGTTGACATCTGCATGAGTTTTTAAGGGCAATGCATA  390
       ||| |||||||||| ||||||||||||||||||||||||||||||||| 
seq2  TTCACAGCATTCAGGGTGACATCTGCATGAGTTTTTAAGGGCAATGCATC  395

seq1  ACCAGCTTTATAAAACTAGAGAAATAATAAGTCAGACATTTGAGAGAGAG  440
      || |||| | |  ||| |||||||| |||||||| |||||||||||||||
seq2  ACGAGCTCTCTTGAACGAGAGAAATTATAAGTCATACATTTGAGAGAGAG  445

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAAGCAAAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAAAGAGAAGCAAAG  495

seq1  GTCAAAAATATAAAATCAGAGAAAAGCTTAATCTTGAAGTTAATTGCAGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAATATAAAATCAGAGAAAAGCTTAATCTTGAAGTTAATTGCAGT  545

seq1  CCATTATTACTTTTACAAATAATTCATATAAAGATAAAATTTTATAATGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATTACTTTTACAAATAATTCATATAAAGATAAAATTTTATAATGA  595

seq1  ATCAGGAATGGGCCATAAAGTCAAGGGGAAAAGTGTTAATGTTAATGTTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAATGGGCCATAAAGTCAAGGGGAAAAGTGTTAATGTTAATGTTA  645

seq1  TAGTTCTTAAATGTTATGCTATGTTTTAAGTGATATGTGTCAAGACATCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTTAAATGTTATGCTATGTTTTAAGTGATATGTGTCAAGACATCT  695

seq1  GAGACTAGGTGGAGCAGTCAATACAAGCAAGCCACCAACTAGAACAAATG  740
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAGACTAGGTGGAGCAGTCAATACAAGCAAGCCCCCAACTAGAACAAATG  745

seq1  CAGACAATGGCTGAGAACAGAGCAAAGGCATGTGGTGTTCTCATTAGACA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATGGCTGAGAACAGAGCAAAGGCATGTGGTGTTCTCATTAGACA  795

seq1  CATGTTCCCAGGAGGAGCTGAAGGCTGGGCACGATGCTAGCAAGGCTCAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCCCAGGAGGAGCTGAAGGCTGGGCACGATGCTAGCAAGGCTCAC  845

seq1  CTGTGATGCTAGGTGACCCACATACAGAAGACATGCTCCAGGTGCACAGC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATGCTAGGTGACCCACATACAGAAGACATGCTCCAGGTGCACAGC  895

seq1  TGTGACAAGGCCCATGCATTTCTACAGGGCTCACAATTTTTCTACTTGTT  940
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTGACAAGGCCCATGCATTTCTACAGGGCTCACAATTTTTCCACTTGTT  945

seq1  TTTTTTTTTTTTCTTTTTTCTCAAAGCCAGTTAGAAACATCCAAAAGGCA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTCTTTTTTCTCAAAGCCAGTTAGAAACATCCAAAAGGCA  995

seq1  AGGCCCTTTTCTCGTGCTTTCTATCTTTGGTAGTTCCCTCTGTCCCATCT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTTTTCTCGTGCTTTCTATCTTTGGTAGTTCCCTCTGTCCCATCT  1045

seq1  AACAGAATTC  1050
      ||||||||||
seq2  AACAGAATTC  1055

seq1: chr10_90269706_90270849
seq2: B6Ng01-305B22.g_65_1211

seq1  GAATTCCTATGCCTCAAATAAAAATCCAAAGGCAAAATGTCATATTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGCCTCAAATAAAAATCCAAAGGCAAAATGTCATATTTTGA  50

seq1  AGGAATATTTGTAAAATAAGCCAGCAAGCATTGCTCTTGTTATGTAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AGGAATATTTGTAAAATAAGCCAGCAAGCATTGCTCTTGTTATGTAATAA  100

seq1  TTGTGGATAGATCAGTGAGAAACATAGAAAGAACCCAGAAGCCAACTGGA  150
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  TTGTGGATAGATCAGTGAGAAACATAAAAAGAACCCAAAAGCCAACTGGA  150

seq1  CAAAAGATGTTCTCTATTCACAGAACAAGCACAGATGTCCCACAACGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATGTTCTCTATTCACAGAACAAGCACAGATGTCCCACAACGTAT  200

seq1  AAAAAAAACCACACAAGCAATTAAAGTAATAGCTTCTATTTTCACCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCACACAAGCAATTAAAGTAATAGCTTCTATTTTCACCTTTT  250

seq1  TTTCTAAGATTTCCTTATTTTATTTATGAGTACACTGTTGCTGACTTCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGATTTCCTTATTTTATTTATGAGTACACTGTTGCTGACTTCGG  300

seq1  ATACACACCAGAAGAGGGAGTCAGATCCCAATCCGGATCACTGTAATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACCAGAAGAGGGAGTCAGATCCCAATCCGGATCACTGTAATGCC  350

seq1  ACCTTGTTGTTGCTGAGAATTGAACTCAGGGCCTCTGGAAAACCAGCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGTTGTTGCTGAGAATTGAACTCAGGGCCTCTGGAAAACCAGCCAG  400

seq1  TGAGTGCTCTTAACTAGTGAGCCATTTCTCCAGCCCCCTTCTTTTTACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCTCTTAACTAGTGAGCCATTTCTCCAGCCCCCTTCTTTTTACCT  450

seq1  TTTAAACTGACCAAGACATGGTATTATTACATATGCTAAAACACACACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTGACCAAGACATGGTATTATTACATATGCTAAAACACACACTC  500

seq1  TTATATAATACTGAAGGGAGCAGAAAACCAATGCTATTCACCAGGAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTATATAATACTGAAGGGAGCAGAAAACCAATGCTATTCACCATGAGATG  550

seq1  GAGATGCATATTTTCCTCAGGAAGCTTAAGGGGACAACACCCTATACCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCATATTTTCCTCAGGAAGCTTAAGGGGACAACACCCTATACCCA  600

seq1  AGGACTCATTGTGAGACTGATTAGAAATGCCACAATGGTTGGCATGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCATTGTGAGACTGATTAGAAATGCCACAATGGTTGGCATGTGAG  650

seq1  GATATTCATTATGGTATTCATTTTAATACAGAGGAAAACTAAAATGATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCATTATGGTATTCATTTTAATACAGAGGAAAACTAAAATGATCT  700

seq1  ACTGTCAGGATACTTTTAAATACACTGTGGTATGTCGAGCACCTCCTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAGGATACTTTTAAATACACTGTGGTATGTCGAGCACCTCCTCAT  750

seq1  TTCACACACTTGTCTTCCTTAGCATCCCTCGGGCATTCTTCAGTGTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCACACACTTGTCTTCCTTAGCATCCCTCGGGCATTCTTCAGTGATTTC  800

seq1  TGTGACTATAGCTGTCTGCTCATAGCTCCTGCTGACTGGTTCTGTCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTATAGCTGTCTGCTCATAGCTCCTGCTGACTGGTTCTGTCTGCT  850

seq1  TGTACGTGGTCCAATTCTCCCTCCGCCCC-AGTTCATCTCTCTCT-TTGG  898
      ||||||||||||||||||||||||||||| | ||||||||||||| | ||
seq2  TGTACGTGGTCCAATTCTCCCTCCGCCCCAATTTCATCTCTCTCTATGGG  900

seq1  AGCACCTTCTAGGTTTCTACCCCTGTAACCAACTGCCCAA-TTTCTTCCT  947
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  AGCACCTTCTAGGTTTCTACCCCTGTAA-CAACTGCCCAATTTTCTTCCT  949

seq1  CTCCTTAAATGTAAACTCCTAAGAAGAAGACTCACTCATGAAGCAGAGTC  997
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTCCTTAAATGTAAACTCCTAAGAAG-AGACTCACTCATGAAGCAGAGTC  998

seq1  ACAACTGG-CTCTGGGAAGGGACTCCAGGACTC-TCCATGAGGGAGTAGT  1045
      || ||||| |||||| | || |||||||||||| || |||| ||||||||
seq2  AC-ACTGGTCTCTGGCATGGTACTCCAGGACTCTTCGATGA-GGAGTAGT  1046

seq1  GGCGGTATTGTTT-GGTACAGG-ACACAGCTGCCCAGGCA-GGATATAGC  1092
      ||| ||| ||||| |||||||| ||||||||| ||| ||| | |||||||
seq2  GGC-GTACTGTTTGGGTACAGGAACACAGCTGACCAAGCATGAATATAGC  1095

seq1  CTTG-TGTGTAGGAGTCACAGACTCGGCAGGTATCATCTTAGCAATTACA  1141
      |||| ||||||| |||||| |||||||||| |    ||||||| | ||||
seq2  CTTGTTGTGTAGCAGTCACGGACTCGGCAGTTGCATTCTTAGCCA-TACA  1144

seq1  GCA  1144
      |||
seq2  GCA  1147