BAC Information

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BAC

Clone NameB6Ng01-306B02
Chromosome10 (Build37)
Map Location 63,465,441 - 63,466,355
singlet/doubletsinglet
Overlap geneCtnna3, Lrrtm3
Upstream geneRufy2, Hnrph3, 3110049J23Rik, Pbld, Atoh7, Mypn, 1700120B22Rik, Herc4, Sirt1, Dnajc12, LOC665182, EG631906
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306B02.bB6Ng01-306B02.g
ACCGA099200GA099201
length916250
definitionB6Ng01-306B02.b B6Ng01-306B02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatttttcactggatctctccttatgtatccaataactctttg
aatagctttgaattcagcagagcagtttttaaatgaaaattaatggtaga
gtttaatgtacagtttctttactgctgatcaatgtgaaagaaactttatg
gcattggtttccttacaagtaggaaactcatttccttgagaaatgcatat
tcagaaggctgctcttcttgagaggtgatttggctgatatgttaagagca
acgagaaggtacctcgtctttgcatgtccccccttttagttagagggtga
gtgatcttccaccaaagttccttgtatgacacaacactatctcttgctct
cctgactagtgttgttctttcaacattcaaattttactttaaatgtttgt
aaatgaaattcattagatttgctagtagtatgtatacttaggaaatttgt
aaatactaattaatttatcttcataaaattcttggatctggattgccaga
tagtcattcgtatttgggtgaaaataaggactatctcttacaactggcct
ggagtttcaaaatgtaggtaaggacaatagcttgtgggtgttccagaatc
caggacctcataggattgaaatttttgttgtatgtttaaaaatgatcctt
ttggtgagggttaaagaccaaaattagaaactaaacaattcttagtcata
tgacaaacaggcagatatagaagattttcatctttctgataaaacatgca
tatagtattgcatgggaggactgcatgtcttgtaatgtcagtcttctttc
ctaagaatagcccctcttaaagaatatttattgaaaaatacatattaaga
agctaaaggtttaatatgacattgctttatgaaacattttttttgggggt
taggaagagggttttc

tatctcagtgtgattgtccactgagagctgggatactcagacaagcatta
ttctccatttctgcaagggggtttctagcttgattaatatttaaattgct
agactgagtgaaactgcacttctctgtgctgtgagtgggatcaagtccaa
tgcattgaagaacttacttgaagattaattaggatagatgtcgccaaact
tttgaactgtgagagtatagttgttgttgattatgatgatgttgttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_63465441_63466355
seq2: B6Ng01-306B02.b_47_962

seq1  GAATTCCCATTTTTCACTGGATCTCTCCTTATGTATCCAATAACTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTTTTCACTGGATCTCTCCTTATGTATCCAATAACTCTTTG  50

seq1  AATAGCTTTGAATTCAGCAGAGCAGTTTTTAAATGAAAATTAATGGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTTGAATTCAGCAGAGCAGTTTTTAAATGAAAATTAATGGTAGA  100

seq1  GTTTAATGTACAGTTTCTTTACTGCTGATCAATGTGAAAGAAACTTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATGTACAGTTTCTTTACTGCTGATCAATGTGAAAGAAACTTTATG  150

seq1  GCATTGGTTTCCTTACAAGTAGGAAACTCATTTCCTTGAGAAATGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGTTTCCTTACAAGTAGGAAACTCATTTCCTTGAGAAATGCATAT  200

seq1  TCAGAAGGCTGCTCTTCTTGAGAGGTGATTTGGCTGATATGTTAAGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGCTGCTCTTCTTGAGAGGTGATTTGGCTGATATGTTAAGAGCA  250

seq1  ACGAGAAGGTACCTCGTCTTTGCATGTCCCCCCTTTTAGTTAGAGGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAAGGTACCTCGTCTTTGCATGTCCCCCCTTTTAGTTAGAGGGTGA  300

seq1  GTGATCTTCCACCAAAGTTCCTTGTATGACACAACACTATCTCTTGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTTCCACCAAAGTTCCTTGTATGACACAACACTATCTCTTGCTCT  350

seq1  CCTGACTAGTGTTGTTCTTTCAACATTCAAATTTTACTTTAAATGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTAGTGTTGTTCTTTCAACATTCAAATTTTACTTTAAATGTTTGT  400

seq1  AAATGAAATTCATTAGATTTGCTAGTAGTATGTATACTTAGGAAATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAATTCATTAGATTTGCTAGTAGTATGTATACTTAGGAAATTTGT  450

seq1  AAATACTAATTAATTTATCTTCATAAAATTCTTGGATCTGGATTGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAATTAATTTATCTTCATAAAATTCTTGGATCTGGATTGCCAGA  500

seq1  TAGTCATTCGTATTTGGGTGAAAATAAGGACTATCTCTTACAACTGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTCGTATTTGGGTGAAAATAAGGACTATCTCTTACAACTGGCCT  550

seq1  GGAGTTTCAAAATGTAGGTAAGGACAATAGCTTGTGGGTGTTCCAGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCAAAATGTAGGTAAGGACAATAGCTTGTGGGTGTTCCAGAATC  600

seq1  CAGGACCTCATAGGATTGAAATTTTTGTTGTATGTTTAAAAATGATCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCTCATAGGATTGAAATTTTTGTTGTATGTTTAAAAATGATCCTT  650

seq1  TTGGTGAGGGTTAAAGACCAAAATTAGAAACTAAACAATTCTTAGTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAGGGTTAAAGACCAAAATTAGAAACTAAACAATTCTTAGTCATA  700

seq1  TGACAAACAGGCAGATATAGAAGATTTTCATCTTTCTGATAAAACATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACAGGCAGATATAGAAGATTTTCATCTTTCTGATAAAACATGCA  750

seq1  TATAGTATTGCATGGGAGGACTGCATGTCTTGTAATGTCAGTCTTCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTATTGCATGGGAGGACTGCATGTCTTGTAATGTCAGTCTTCTTTC  800

seq1  CTAAGAATAGCCCCTCTTAAAGAATATTTATTGAAAAATACATATTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATAGCCCCTCTTAAAGAATATTTATTGAAAAATACATATTAAGA  850

seq1  AGCTAAAGGTTTAATATGACATTGCTTTATGAAACA-TTTTTTTGGGGGT  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGCTAAAGGTTTAATATGACATTGCTTTATGAAACATTTTTTTTGGGGGT  900

seq1  TAGGAAGAGGGTTTTC  915
      ||||||||||||||||
seq2  TAGGAAGAGGGTTTTC  916


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