BAC Information

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BAC

Clone NameB6Ng01-306G20
Chromosome10 (Build37)
Map Location 46,417,458 - 46,418,537
singlet/doubletsinglet
Overlap genenone
Upstream geneHace1, LOC664781
Downstream geneLOC100041632, LOC668252, LOC100042387
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306G20.bB6Ng01-306G20.g
ACCGA099468GA099469
length8741,059
definitionB6Ng01-306G20.b B6Ng01-306G20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcttcagaggcttgaagttcttctcatacagatctttcactt
gcttggttagagtcaaaccaagatatgaaatattatttgtgactattttg
aagggtgttgtttccttaatttctttctcagcctgtttatcctttgaata
gaagaaagctgatgatttgtttgagttaattttatatacagccactttgc
tgaagttgtttatcagctttagaagttctctagtgaaaattttagggtcc
cttaagtattcgatcatatcatctgcaaacagtgatattttgacttcatc
ctttccaatttgtatccctttgacctccttttgttgtctaattgctctag
gtagaacttgggtactatgttgaatagatagagagtgggcagccttgtct
agtccctgattttagtgggattgcttccagcttctctccatttagtttga
tgttggcaactggcttttagtatattggttttactgcatttatgtgtggg
ccttgaattcctgtttttccaagacttttaacatgaagggatactgaatt
ttgtcaaatgcttgttgaatctcatgaaatgattatgtatttcttttctt
tgagtttgtttatgtagtagattacattgatggattttcatatcttaaat
catccctgagtccctgggatgaagtctacttgatcttggtgaatgatcat
tttgatgtgttcttggatttggtgggcaagagttttattgaatatttttg
catcaatgttcataagtgagattggtcctgaaggtctctttctttattgg
gtcttttgtgtggtttagttataagtgtaattgtggcttcaaagattgaa
ttgggtaggagttacctctctgct

gaattcaaattgaatttattcactttactttttaattcttttgttttttt
tttttttttttttgatttgggttttatttctttgtttatgtctgttacag
ccttaaggatacatctgagaaagaacttatatttctacacattttctgag
gaagtcagtatgaaatataacaaatatgtacattgtccttagccaagaaa
agcttctaagtgaggctgatgcacaaaaaaataaaaccagacaaaaatcc
ggaatgtttcactcactatgagcttggttatctacatttaattatgaata
gggccaatcatgataaatctaatttattggaaaattactaaccttagttc
tcctaaatttagcaggtcatggctgtgtattgtataattaggtagagagc
tattattcatcttagcagctgttttcctccttacacataatatttgagaa
tccaggcacataggtggagatgaggatcctaactttcagaattctggtca
cacaggggaagccccagcaatacctttgtgttctcagccccctagtggga
aactgaaaagtgctttacttatgcaagctgctcacgcaaggctgtatcca
ggccatgaagattagattattgtaactccctgttggctgacttgctccat
aaggccttacataaactccagctgctgaaggacaaagctgccaagttcct
ctgaaaagggcaaaattaatcaaaatatatttctccctatctgaaatccc
tatgttagctattggttaaaaactaaagtagtgcccagatttttaaattc
ctcctttaattcagagggtaaaagctgggcccagctccaatatccctttt
acaacctcttggcaatttatgtttcctggccagctcttgaactctgctga
agcaatctgttcatgccccaagactgttgcagatttatgaaacaaagcag
tagtctatatcttacaggtagaccctgctttgatacaaagcagtagactg
aatatataaaaaaaactctggcactatctaaggatgacttacgcaatttt
attccagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_46417458_46418537
seq2: B6Ng01-306G20.g_65_1123 (reverse)

seq1  TACTGAAAATAAAATTGCCTTATGTCATCCTAAGGAATAGTTGCCAAGAA  50
      |||||  |||||||||| | || |||||||| ||  |||| |||||   |
seq2  TACTG-GAATAAAATTG-CGTAAGTCATCCTTAG--ATAG-TGCCA--GA  43

seq1  GTTTTTTTTAATATATTTCAAGTCTACTGCTTTGTAATCAAAGCAGGGTT  100
      ||||||||| |||||||   ||||||||||||||| |||||||||||| |
seq2  GTTTTTTTT-ATATATT--CAGTCTACTGCTTTGT-ATCAAAGCAGGG-T  88

seq1  CTACCTTGTAAAGATTATAGAACTAACTGCCTTTGTTTCATAAAATCCTG  150
      ||||| ||| |||| ||||| ||| |||| ||||||||||||||   |||
seq2  CTACC-TGT-AAGA-TATAG-ACT-ACTG-CTTTGTTTCATAAA--TCTG  130

seq1  CAACAGTCTTGGGGCATGAAACAGATTTGCTTCAGCAGAGTTCAAGAGCT  200
      |||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2  CAACAGTCTTGGGGCATG-AACAGA-TTGCTTCAGCAGAGTTCAAGAGCT  178

seq1  GGCCAGGAAACATAAATTGCCAAGAGGTTGTAAAAGGGATATTGGAGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGAAACATAAATTGCCAAGAGGTTGTAAAAGGGATATTGGAGCTG  228

seq1  GG-CCAGCTTTTACCCTCTGAATTAAAGGAGGAATTTAAAAATCTGGGCA  299
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCTTTTACCCTCTGAATTAAAGGAGGAATTTAAAAATCTGGGCA  278

seq1  CTACTTTAGTTTTTAACCAATAGCTAACATAGGGATTTCAGATAGGGAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTAGTTTTTAACCAATAGCTAACATAGGGATTTCAGATAGGGAGA  328

seq1  AATATATTTTGATTAATTTTGCCCTTTTCAGAGGAACTTGGCAGCTTTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTTTGATTAATTTTGCCCTTTTCAGAGGAACTTGGCAGCTTTGT  378

seq1  CCTTCAGCAGCTGGAGTTTATGTAAGGCCTTATGGAGCAAGTCAGCCAAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCAGCTGGAGTTTATGTAAGGCCTTATGGAGCAAGTCAGCCAAC  428

seq1  AGGGAGTTACAATAATCTAATCTTCATGGCCTGGATACAGCCTTGCGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTACAATAATCTAATCTTCATGGCCTGGATACAGCCTTGCGTGA  478

seq1  GCAGCTTGCATAAGTAAAGCACTTTTCAGTTTCCCACTAGGGGGCTGAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTGCATAAGTAAAGCACTTTTCAGTTTCCCACTAGGGGGCTGAGA  528

seq1  ACACAAAGGTATTGCTGGGGCTTCCCCTGTGTGACCAGAATTCTGAAAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGGTATTGCTGGGGCTTCCCCTGTGTGACCAGAATTCTGAAAGT  578

seq1  TAGGATCCTCATCTCCACCTATGTGCCTGGATTCTCAAATATTATGTGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATCCTCATCTCCACCTATGTGCCTGGATTCTCAAATATTATGTGTA  628

seq1  AGGAGGAAAACAGCTGCTAAGATGAATAATAGCTCTCTACCTAATTATAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAAACAGCTGCTAAGATGAATAATAGCTCTCTACCTAATTATAC  678

seq1  AATACACAGCCATGACCTGCTAAATTTAGGAGAACTAAGGTTAGTAATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACAGCCATGACCTGCTAAATTTAGGAGAACTAAGGTTAGTAATTT  728

seq1  TCCAATAAATTAGATTTATCATGATTGGCCCTATTCATAATTAAATGTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAAATTAGATTTATCATGATTGGCCCTATTCATAATTAAATGTAG  778

seq1  ATAACCAAGCTCATAGTGAGTGAAACATTCCGGATTTTTGTCTGGTTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAGCTCATAGTGAGTGAAACATTCCGGATTTTTGTCTGGTTTTA  828

seq1  TTTTTTTGTGCATCAGCCTCACTTAGAAGCTTTTCTTGGCTAAGGACAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTGCATCAGCCTCACTTAGAAGCTTTTCTTGGCTAAGGACAAT  878

seq1  GTACATATTTGTTATATTTCATACTGACTTCCTCAGAAAATGTGTAGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATATTTGTTATATTTCATACTGACTTCCTCAGAAAATGTGTAGAAA  928

seq1  TATAAGTTCTTTCTCAGATGTATCCTTAAGGCTGTAACAGACATAAACAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTTCTTTCTCAGATGTATCCTTAAGGCTGTAACAGACATAAACAA  978

seq1  AGAAATAAAACCCAAATCAAAAAAAAAAAAAAAAAAAACAAAAGAATTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAACCCAAATCAAAAAAAAAAAAAAAAAAAACAAAAGAATTAA  1028

seq1  AAAGTAAAGTGAATAAATTCAATTTGAATTC  1080
      |||||||||||||||||||||||||||||||
seq2  AAAGTAAAGTGAATAAATTCAATTTGAATTC  1059


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